Lcra048028.1
Basic Information
- Insect
- Lochmaea crataegi
- Gene Symbol
- -
- Assembly
- GCA_947563755.1
- Location
- OX387434.1:16251055-16251741[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-08 6.1e-05 24.5 0.8 26 63 11 48 6 50 0.92
Sequence Information
- Coding Sequence
- ATGGATGCAAAGAATGCTAGAATTGAAAATAAAATAGACGGGATGTATAAGCAAATCGAACAACTAAAAAAAGAGAATATGCAGTTAAAAAGGGAAAATGTTGACTTGAGAGGAGAAACGGAACATTTAAATGAAAAGATCATACAGATTGAAAAGAGTCTAAGAAAGAAAAATGTTATAATACATGGAATCATGGAGGAGGAGGAGGAGGAAAGCAAGATACAGTTGGAAAGTAAATTGAAGAACATTATTAGTAAAGTGAACAGCACGATTGATGTAAAAACTGATGTAATTGAATTCAGGAGAATTGGTGGAAATAACAAAAATAGACCTGTTCTGGTGGAAATGAAAGATTGGGATAAGAAAATAGATATCCTGAAAGAAGCAAATAAGTTAAAAGGGACAACAATATACATGAACGAAGATTATCCAAAAGAAATACTACAACAGAGAAAGAATTTAATCAGATACATGAAAGAGGCAAGAGACAGCGGACAAAGGGTGAAACTGGTTTACAACAGATTGGGAACATATAATGAAACCCAGGATGAGAGAAAGAGGTCCGCTAGCATGAGATCCCCAGAAGGACACTCAGAGGAACAATCCACAAAAATAATAAAAACAAATGAAAAAAACTGA
- Protein Sequence
- MDAKNARIENKIDGMYKQIEQLKKENMQLKRENVDLRGETEHLNEKIIQIEKSLRKKNVIIHGIMEEEEEESKIQLESKLKNIISKVNSTIDVKTDVIEFRRIGGNNKNRPVLVEMKDWDKKIDILKEANKLKGTTIYMNEDYPKEILQQRKNLIRYMKEARDSGQRVKLVYNRLGTYNETQDERKRSASMRSPEGHSEEQSTKIIKTNEKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00910277; iTF_00910276; iTF_00910278; iTF_00910279; iTF_00910280;
- 90% Identity
- -
- 80% Identity
- -