Lcap003393.1
Basic Information
- Insect
- Lochmaea capreae
- Gene Symbol
- Zmiz1
- Assembly
- GCA_949126875.1
- Location
- OX421396.1:5575815-5581093[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.075 2.2e+03 0.2 0.7 4 24 398 418 395 423 0.88 2 2 4.2e-26 1.2e-21 77.8 4.3 1 50 478 527 478 527 0.98
Sequence Information
- Coding Sequence
- ATGGTAGCAGCGGCTACAGCTACCGCTACTGCCACCGCCAGCGTGGTAGCCTTACAAGACAATTCACAATTCAACAACCAGCAGTACcaacaaaattatcaacaaCGCATGATGGGAATGAATGGAATGAACGGTATGAACGGTATGAATCCTATgAACATGAATATGGGAGGCATGCACAACAACATGATGAGCAACATGGGACCTAAGATGGGTATGCAAGGTCCTGGTCCAGGACCGAATTCCAATTCGATGTATCCCAGACGGATGACACCGTATCCTTCGCCGGCGATGCATATGCCGCAAAAACGCAGCATCCAACAAAATTATGCAGGCAACTGTCCCACGTTGAATCCTTCCATAAGTCCTATGAATCCTTCTATGAGTCCTATGAACCCTTCCATGAATCCTAATATGAATCCCAACATGGGTGCCGGTATGAATCCCAATTTTAATCCTAGTAGCCAGTATCCTTACAATAGTACGCGACAACCCAGCTTTAACCAATATCCTTCGCAGCAAAGCTTAGGTCCTTCGAACCCCTTCGGACCTGCTCCCATGTCGATGGGAAATCCCAGGCAACTGCGGCAGGCGACACCACCTTACACAAACCAAGGACAGTATTTCAACAATGGTTCCATCAACCAATTCCCCTCTAACAATTCTGGTCAGTACAATATGAATAGCAGTGGTAATTCTAACAGTCAGTATGTGAACACCACCTCAGCACAATTTCAACAAGACGTATCTATGAGGAATAACATGAGTTACCAACACAGTCCCATTCCGGGTAATCCTACACCGCCTCTAACGCCAGCCAGTAGTATGCCGCCATACATTAGTCCGAATCCGGACGTGAAGCCCAATTTTAATGACCTGAAACCACCGCTACCAATACCAAACGATGAATTAAGATTAACGTTTCCGGTACGAGACGGCATTATACTCCCACCTTTCCGTTTGGAACACAACCTAGCAGTCAGTAACCACGTGTTTCAGTTGAAACCGACAGTGCATCAAACTTTGATGTGGCGGCAAGATTTGGAGCTGCAGCTGAAATGCTTTCATCACGAAGATCGACAGATGAACACAAATTGGCCGGCATCAGTACAAGTTTCCGTAAACGCCACACCTCTAATGATCGACAGAGGTGAGAACAAAACATCCCACAAACCGCTCTACTTGAAAGACGTTTGTCAACCGGGAAGAAACACCATACAGATCACCGTATCGGCTTGTTGTTGCtcGCATCTGTTTGTTCTTCAATTGGTTCACCGACCTAGCGTTCGATCCGTTTTGCAAGGTTTGCTTAGAAAACGACTCCTGACAGCCGATCATTGTATAGCGAAGATCAAAAGGAATTTCAGCAACACCGGAAGCTCGACTGCCGGTACTGGAGATAGAGATGCCGTGGAGCAAACAGCGTTGAAGGTCTCTGTGAAATGTCCGATAACATTTAAGAGGATAACTTTACCCGCCAGAGGGCACGAGTGCAAACACATACAGTGCTTCGATTTGGAATCGTATTTGCAATTGAATTGCGAAAGGGGTGCTTGGAGATGTCCTGTTTGCAACAAACCCGCACAATTAGAAGGCTTGGAAGTCGATCAATATATGTGGGGTATTTTGAACACATTGAACACATCCGACGTAGAAGAAGTCACCATTGATAGTTCTGCTAATTGGAAGGCTGCCAAAGGCAACATACCAGGAATCAAAatgGAGGACGAAGGAACTGACTCTTGTAGCGGTGGTAAACGTAATAAAGCGATGTCACCGGGAAGCATGACTCTACCTACAATGAATAATTGGGATATGCAGGCTATGTCGCCGTACCTACCACCAGACATGAACAGCATTGCAAGTGGATCGATGATGAATGGTGGTCCGCCGTCTTACAACAATTCTTATACCAATAGCAACGATTATTTAGGTGGCAATGGTCCATTGTCGCATCTTAGTGATTCTGTTAATTCGTTAGATCCACTGAATGCGATGGAAAAGAGTCTCAACGAACAGaTGCCACACACCCCTCACACTCCACACACGCCACATACGCCGCACACTCCAGGAGGAGGAACACCGGGATCGGCTCATACGCCAGGAGGAGGAACCGGACCTCCAAGTGTACCACCAGCTACTTCAGATGCTCACAATTCCAGTAACGGTTCCAATAACGGTGGCCCCGCTTCCGTACCCGGCGGAAATGGATCAAACGGAGACACGTCAGTACCAGATATACCTTCAGATCTTAACTTCGATCCAGCGGCTGTAATCGATGGGGAAGGTACAGGACAAGAAGCACTCAACttATTACCAGATAGCGTGGATCCTATGGAGTTGTTGTCTTACCTGGATCCACCGGATCTGAACACGCCGCCGTCTAGCGGCAGTAGTTCGGGTCAAGCAAACACGTCTACCAACGATGACATATTGGCGTTGTTCGAATGA
- Protein Sequence
- MVAAATATATATASVVALQDNSQFNNQQYQQNYQQRMMGMNGMNGMNGMNPMNMNMGGMHNNMMSNMGPKMGMQGPGPGPNSNSMYPRRMTPYPSPAMHMPQKRSIQQNYAGNCPTLNPSISPMNPSMSPMNPSMNPNMNPNMGAGMNPNFNPSSQYPYNSTRQPSFNQYPSQQSLGPSNPFGPAPMSMGNPRQLRQATPPYTNQGQYFNNGSINQFPSNNSGQYNMNSSGNSNSQYVNTTSAQFQQDVSMRNNMSYQHSPIPGNPTPPLTPASSMPPYISPNPDVKPNFNDLKPPLPIPNDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHQTLMWRQDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLMIDRGENKTSHKPLYLKDVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKRNFSNTGSSTAGTGDRDAVEQTALKVSVKCPITFKRITLPARGHECKHIQCFDLESYLQLNCERGAWRCPVCNKPAQLEGLEVDQYMWGILNTLNTSDVEEVTIDSSANWKAAKGNIPGIKMEDEGTDSCSGGKRNKAMSPGSMTLPTMNNWDMQAMSPYLPPDMNSIASGSMMNGGPPSYNNSYTNSNDYLGGNGPLSHLSDSVNSLDPLNAMEKSLNEQMPHTPHTPHTPHTPHTPGGGTPGSAHTPGGGTGPPSVPPATSDAHNSSNGSNNGGPASVPGGNGSNGDTSVPDIPSDLNFDPAAVIDGEGTGQEALNLLPDSVDPMELLSYLDPPDLNTPPSSGSSSGQANTSTNDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00026515;
- 90% Identity
- iTF_00736293;
- 80% Identity
- -