Basic Information

Insect: Lochmaea capreae
Gene Symbol: ZNF341
Assembly: GCA_949126875.1
Location: OX421404.1:26147353-26161780[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.00031 0.064 15.4 0.4 2 23 7 28 6 28 0.96

2 25 0.0002 0.042 15.9 1.4 1 23 37 60 37 60 0.93

3 25 3.1e-05 0.0064 18.5 0.3 2 23 70 91 69 91 0.96

4 25 0.00082 0.17 14.0 2.5 1 23 97 119 97 119 0.96

5 25 1.3e-05 0.0026 19.7 0.8 1 23 125 147 125 147 0.99

6 25 0.0026 0.54 12.4 0.1 1 17 153 169 153 170 0.91

7 25 0.046 9.4 8.5 4.0 2 23 190 211 189 211 0.93

8 25 0.002 0.41 12.8 2.6 2 23 248 270 247 270 0.92

9 25 0.0022 0.46 12.7 0.6 1 23 279 302 279 302 0.97

10 25 0.021 4.2 9.6 0.4 2 20 309 327 308 330 0.89

11 25 0.11 22 7.4 3.1 1 14 336 349 336 357 0.83

12 25 5 1e+03 2.1 4.8 2 23 364 385 363 385 0.90

13 25 9.2e-05 0.019 17.0 0.3 2 23 393 415 393 415 0.93

14 25 0.0071 1.4 11.1 0.5 2 23 425 446 424 446 0.97

15 25 0.0026 0.53 12.5 0.1 1 23 452 474 452 474 0.97

16 25 0.016 3.2 10.0 0.6 1 12 480 491 480 493 0.92

17 25 3.2 6.5e+02 2.7 1.1 2 15 565 578 564 586 0.71

18 25 0.3 62 6.0 5.0 1 23 592 614 592 614 0.98

19 25 2.7 5.5e+02 3.0 4.1 1 23 617 639 617 639 0.91

20 25 0.42 85 5.5 3.5 2 23 646 667 645 667 0.94

21 25 4.1e-05 0.0083 18.1 0.4 2 23 677 699 676 699 0.92

22 25 0.38 78 5.6 0.6 2 23 709 730 708 730 0.96

23 25 0.0053 1.1 11.5 0.0 3 23 738 758 736 758 0.98

24 25 4.9e-05 0.01 17.9 3.0 1 23 764 786 764 786 0.99

25 25 7.3e-05 0.015 17.3 0.4 1 21 792 812 792 813 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.00031	0.064	15.4	0.4	2	23	7	28	6	28	0.96
2	25	0.0002	0.042	15.9	1.4	1	23	37	60	37	60	0.93
3	25	3.1e-05	0.0064	18.5	0.3	2	23	70	91	69	91	0.96
4	25	0.00082	0.17	14.0	2.5	1	23	97	119	97	119	0.96
5	25	1.3e-05	0.0026	19.7	0.8	1	23	125	147	125	147	0.99
6	25	0.0026	0.54	12.4	0.1	1	17	153	169	153	170	0.91
7	25	0.046	9.4	8.5	4.0	2	23	190	211	189	211	0.93
8	25	0.002	0.41	12.8	2.6	2	23	248	270	247	270	0.92
9	25	0.0022	0.46	12.7	0.6	1	23	279	302	279	302	0.97
10	25	0.021	4.2	9.6	0.4	2	20	309	327	308	330	0.89
11	25	0.11	22	7.4	3.1	1	14	336	349	336	357	0.83
12	25	5	1e+03	2.1	4.8	2	23	364	385	363	385	0.90
13	25	9.2e-05	0.019	17.0	0.3	2	23	393	415	393	415	0.93
14	25	0.0071	1.4	11.1	0.5	2	23	425	446	424	446	0.97
15	25	0.0026	0.53	12.5	0.1	1	23	452	474	452	474	0.97
16	25	0.016	3.2	10.0	0.6	1	12	480	491	480	493	0.92
17	25	3.2	6.5e+02	2.7	1.1	2	15	565	578	564	586	0.71
18	25	0.3	62	6.0	5.0	1	23	592	614	592	614	0.98
19	25	2.7	5.5e+02	3.0	4.1	1	23	617	639	617	639	0.91
20	25	0.42	85	5.5	3.5	2	23	646	667	645	667	0.94
21	25	4.1e-05	0.0083	18.1	0.4	2	23	677	699	676	699	0.92
22	25	0.38	78	5.6	0.6	2	23	709	730	708	730	0.96
23	25	0.0053	1.1	11.5	0.0	3	23	738	758	736	758	0.98
24	25	4.9e-05	0.01	17.9	3.0	1	23	764	786	764	786	0.99
25	25	7.3e-05	0.015	17.3	0.4	1	21	792	812	792	813	0.95

Sequence Information

Coding Sequence: ATGGAAAATAACAAAGTACAATGCGAGATGTGTGGGAAAAGTTTACAAAGCCAATCGTTGAAGACTCATATGAAAATCGTACATACCGATGAAATGACTCATCAGAAGCACTATTGTCCCATATGTAATAAAGCTTACAGgtACACTTCTAGCGTGAGAAAACACATTTCAGCGAATCATAGAGAGCTCGGTATAGACGTTTCGGTAGTGTGTGACATATGCGGCAAAAGAATATCAAGTAAGAGTAAGCTGATGAAGCACTTGACAATCCATACGGGAGATAAACCACATAGTTGTGAGGTCTGTCATAAAAAGTTTAGAGCTATAGATACTCTACGTTCCCATATGGTAGTGCATACAGGAGAAAAACCGTATAAGTGTTCGTATTGCGGTAAAGGTTTCGGACAAAACGCTCCCTATCGGTATCACATTAAAACGCATACCGGCGAGAAAAACTATTCTTGTACTATTTGTGGAAAAGGTTTTATCTCTAAGGCTAATTGGAGAACTATCGATTTGTTCGAAAGAGAGCCAAACGAAATTTGTAGGATTGTAATAATAGAGTTACAATGCGAGGAATGCTCTTTGACATTCAACAACCATCAACAATTCGTCCATCACAAAGCATACCACGAGCGCCAACGTGAACTAATCAACTGCATCATGTGCGATCTACCAATACAAAGAAAAGACTACCAGCATCACAGAACATCTTTACACGCAGCTCAGAATTACAAAATGAAATGTTCCGTTTGCGACAAATACTATTCTCGAACTCTACATTTAAGAAGACATTACGCCGAAAAGCACGAAGAGTTtggtataaaaaaaacttttgtttgTGAATTGTGTGGATATGGCACTTATAACAATGGAGGATTGTTAAGTCACAGGAGAATTTGTCATAATGATGTGAAATTGTTCCTGTGCTCAGCTTGTCCTAAACAATTCCGAACAAAGACTTTGCTGGATTATCACATGCCTGTACATACCGGAGATACTCCGTTTCATTGTAATGTTTGCGGAAAGAAATACAAGCATAGATCAGCTGATAAACACGTTAAATCCCATCAAACCCCTACCACTGTACAATGCGAACTCTGCGGAAAACACCTCAAAAAGCAATGTTTGTACTTACATAAAAGATCTCTTCATTCTGATAATAAAACTTTGGCAAAATGTCCGATTTGTGGTAAAGAGTACCAGAACTCAGGTAGCTTACGTCAACATTATTCAGCGTTTCATAAAGAGATGGGTATTGACATGTCTGTAGTTTGCGATATTTGCGGGATGCGTTTATCTTGCAAAGCGACTCTAGCTCAACATTTACGGACTCATACGGGAGATCGTCCTTTCGCTTGTTCGACTTGTCcgatgaaatttatttctaaagATATTTTGGTAGCGCATTTAAGGGTTCATACCGGTGAAAAACCGTACGTTTGTAAATATTGCGGTAAAAGATTCGCACACGGCGCTCCTTACAGatcCAAAGTAATAACACGAAAACGTAAAAAAAAGATCCAGAGTAACTTCGTCTCTGTCGAAGATAATTGGGATACATTCATCAAAGACGATCCCGACTTTGAATTCGAAGAACCGAAATCATCGAATAAAAAACGAGGTAGACGAAAATCACCTGAATTAGTGCTGGAAAAATTCATAAACTTAAACGAAGTATCGAAGCCTCTTATATGTACACATTGTTCTAAAGCATTTTTGACACATATCGAATTCGGTCTCCATTCCACGGTGCACAACGACGACGGTTTCTATTCCTGTCACATGTGCGATTACCgaaaagataataaaaaaacttttaaagtTCACGTAAAAAGCCACGATTTATATAAATGTGAAAAATGTAACAGGATTTTAAAAAGTAGACTTTGCGCGTACAAACACTCTCAATCACACACCGTACAAAACCCCGTACAATGCGAAATATGCggtaaacatttaaaaaaacaatgtcTCTCTATTCACAAAAGGATTTTACACAGTAACGAAAGATCCAACTTCATCACCAAATGTCCTATATGCGATAAAGAATACCAAAACCCCAGTAGCTTAAGACAACACTACTCGGCTTTTCACAAAGAATTAGGCATAGATGTTTCTGTAGTTTGCGATATTTGCGGAATGCGATTGTCTTGTAAAGGTAAACTACCACAACATCTACGAACTCACACAGGTGACAAACCTTTCGGTTGTGACCTTTGCCCTAAGAAATTCATTGCCAAAGATATTCTCGCCGCACATATGAGAGTGCACACTGGAGAAAAGCCGTACGAATGTAAATTTTGCGGTAAGAAATTTGCGCATAGCGCTCCTTATAGATATCACATCAAAACGCATACTGGCGAAAAGAAACACACTTGTCCCTTGTGTAATAAAGGGTTTATTTCTAAGGCTAATATGAAAATTCATCTAAAGAGTTGCACTACTCAGATAAGATGA
Protein Sequence: MENNKVQCEMCGKSLQSQSLKTHMKIVHTDEMTHQKHYCPICNKAYRYTSSVRKHISANHRELGIDVSVVCDICGKRISSKSKLMKHLTIHTGDKPHSCEVCHKKFRAIDTLRSHMVVHTGEKPYKCSYCGKGFGQNAPYRYHIKTHTGEKNYSCTICGKGFISKANWRTIDLFEREPNEICRIVIIELQCEECSLTFNNHQQFVHHKAYHERQRELINCIMCDLPIQRKDYQHHRTSLHAAQNYKMKCSVCDKYYSRTLHLRRHYAEKHEEFGIKKTFVCELCGYGTYNNGGLLSHRRICHNDVKLFLCSACPKQFRTKTLLDYHMPVHTGDTPFHCNVCGKKYKHRSADKHVKSHQTPTTVQCELCGKHLKKQCLYLHKRSLHSDNKTLAKCPICGKEYQNSGSLRQHYSAFHKEMGIDMSVVCDICGMRLSCKATLAQHLRTHTGDRPFACSTCPMKFISKDILVAHLRVHTGEKPYVCKYCGKRFAHGAPYRSKVITRKRKKKIQSNFVSVEDNWDTFIKDDPDFEFEEPKSSNKKRGRRKSPELVLEKFINLNEVSKPLICTHCSKAFLTHIEFGLHSTVHNDDGFYSCHMCDYRKDNKKTFKVHVKSHDLYKCEKCNRILKSRLCAYKHSQSHTVQNPVQCEICGKHLKKQCLSIHKRILHSNERSNFITKCPICDKEYQNPSSLRQHYSAFHKELGIDVSVVCDICGMRLSCKGKLPQHLRTHTGDKPFGCDLCPKKFIAKDILAAHMRVHTGEKPYECKFCGKKFAHSAPYRYHIKTHTGEKKHTCPLCNKGFISKANMKIHLKSCTTQIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -