Basic Information

Insect: Lochmaea capreae
Gene Symbol: ct
Assembly: GCA_949126875.1
Location: OX421405.1:124410-141731[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.1e-27 1.6e-23 84.1 0.0 3 72 303 373 301 378 0.95

2 3 3.1e-32 4.5e-28 98.7 0.0 3 77 701 776 699 778 0.96

3 3 1.9e-30 2.7e-26 93.0 0.0 3 75 911 984 909 988 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.1e-27	1.6e-23	84.1	3	72	303	373	301	378	0.95
2	3	3.1e-32	4.5e-28	98.7	3	77	701	776	699	778	0.96
3	3	1.9e-30	2.7e-26	93.0	3	75	911	984	909	988	0.95

Sequence Information

Coding Sequence: atgacctACCCTCTGTTTCAGATAAATCATCTAGTAGAGGAAATACAAAGGCTACAGGGATGTCTGTCgaaattacaggaatcttcgATGTCACAGATAAATCTATTAGAAGATCAATTGGAACAAAAAAGACAACACATTTTacgtttagaaaataaattggaTTTACAAAAAGACTATGAAGAACTGAAAAGAGAAGTCagTATATTACGCTCGGACTTAGCTAATAATCCAGATGGGAAGaatatagaattattattagaaaaatcgaaaaatctcTCCGTTCACGATACAAAGGATAAATCACCTATTAGAGAAATTGAagGGGTTGATCAGCATCCTCCGCAAACCCCTACACATTCTATCACCCCTCCAAATATCCTTCCGCCACCGTTTCAAAATGTTGACGCGTTCGGTAGTTTGTTAGGAGAAGAAATAGTTTCTTCTTGGAGAagaaatattgaacaaaatcGTGTAACACCAAAATCACCCTCTACTTCTTTAGATGTACCGCTGAAAAGTTCAACGCCTGTCAATGCAGATTCTACCGCTGAGAAAAGCGCGGCTTCTACTCCCCAACCTTCGGATCAAACCTGCCAGCCGTCACCGAATGAAAACCTCGTAAACGGCAACCCGAAGAGCCCGCAGGAAGACAACAACAACCATCACGTCAGTAATAATAATCTTCCACTATCGGCGATGTGCACATTTTTAAGAAACGAAGACAATTTAAAAAGTCCTTACAGATTCGACGATCACAGACCTACGTTTAAGTTTGCTGAAGATTTAGGTATGGCGCCTGGATCTATGGTGGGAAGACTTGGAGAGAGCCTTATACCAAAAGGAGATCCTATGGAAGCCAGACTTCAAGAAATGTTGAGATACAACATCGATAAATACGCTACACAGAATTTGGacaCTCTTCACATAGCTAGAAGAGTACGAGAGCTGCTCTCGATTCACAATATTGGCCAAAGATTATTCGCAAAATACGTGTTGGGGTTGTCTCAAGGCACAGTTTCGGAATTACTTTCCAAACCTAAACCTTGGGATAAACTTACAGAAAAAGGGCGAGATAGTTACAGAAAAATGCATGCATGGGCTTGTGATGAAAATGCCATACTACTACTGAAATCTTTAATACCAAAGAAagACCATTTTTCATCAACAGGAAAATCGGAAGCCGGTATACCTCCTTACGGTCGTCCCGATAATGATCATCCCGACGATAGATTCGTCCACATTTTAAACGACCCAAATTTCCAACAACACATAAAACAACAACAGCAACATCAACATTTACAACCTCTCGAAGACAGTCACAGCAATGACGATTCTAAATCACCTCAAGGATGCAGCAGTCCATTTTCAAGAGACTCCAGTATGAACAAGAGACTTAAGAAGTACGAAAATGACGATATCTCTCAAGACAAAGTTGTTCGGATATATCAAGAAGAATTAGCCAAACTTATGGGAAGAAGATTAGAAGACTTCAGAGGTCAACGGGAGGGACCTTTTCCTGGTTTGTTTCTTCCTCATCTCTATAGCGGCGGAAATACTTTAGAACGAACGCCCGAGGATCTTAGACTAGTTCTTGACGCATATCATAGAGAATTCGCTAAATTAAATCACGGTCAAAATCCAACTCAGATGCCGTTAAATCTTTTAGCTATCCAACAACAAGCAATCGCCCATCACCAGCAACAACATCAAAACTCTAACGGCGGCGTTCAGGATCTCTCAATTCCCAAAGACAAAATGAAAATGGTTAATGGCAACGTGGATGAAAAAGACAAAGACGACGATCCTATGTCACGCCATTCGGGGTCTGCTTTCAGCTTAGTAAGGCCGAAGATTGAACCAGGAACCCAACCTAGTACAGGATCAACAGCTTCCAGCCCGCTAGGTAATTCAATTCTACCTCCCATGACTCCAAACGATGATTTTGCTGGTTCGGCAGCAGCCTCTCCGTTACAACGAATGGCAAGCATCACAAATTCTCTCATATCACAACCTCCATCCCAGCCACATCCGTCTAATAACAATAGACCTCTTAAAGCAGTATTACCGCCAATAACTCAACAACAATTTGACCTCTACAATAATTTAAACACTGAAGATATTGTTAAAAAAGTCAAAGAACAATTAAGTCAGTATTCTATAAGCCAGAGATTGTTTGGTGAAAGTGTATTGGGGTTGTCGCAAGGATCTGTTAGTGATCTTTTGGCTAGACCCAAACCTTGGCACATGTTAACACAAAAAGGAAGAGAACCTTTTATtagaatgaaaatgtttttagAAGACGACAATGCCGTCCATAAGTTGGTAGCCAGTCAGTACAAAATTGCCCCGGAGAAGTTGATGAGAACAGGAGGATATGGAGGCGCTTGTTCATCCATAGGAAAACCAATGCCTCCAACAAACAAAATGTTGTCGGAAGCAGCAGGTCTCCTTAATAAAATGCAAGAATCGCAAAACATTTTACCTCCGTCTCTTCAACTTGGACCTCCACAAGGAATGAATCCTCAACCTCCACCGCCTCCTATGTTATTAACTCCACCTGGTCTACCACCACATCATGCAATCAACATCCAAAATCAAGATCTCATGAAAAAAGCCAATCACAGTCCACACGGTATTCCACATTCACCAATGGGCCAGCAGCTTACACCTCTCAGAAATATGCACCAACACATTTCTCCCAGTGTTTATGAAATGGCAGCTCTTACTCAAGACTTAGATACTCAAATTATTACCACTAAGATCAAAGAAGCATTACTCGCCAATAATATTGGACAAAAGATATTCGGCGAAGCTGTTCTTGGTTTGTCGCAAGGATCCGTTAGCGAACTTTTGTCAAAACCGAAACCTTGGCACATGCTCAGCATAAAAGGTCGAGAACCATTCATAAGAATGCAACTTTGGCTAAACGATGCGCACAATGTAGACCGGCTGCAAGCTTTAAAGAACGAAAGGAGGGAAGCTAATAAAAGAAGAAGATCATCCGGGGCTGGTGCTCACGATAACAGCAGCGACACTTCTTCAAACGATACCTCAGAATTTTACCATTCAAATTCACCCGGCCCAGGACCACCATCGGCAAAAAAACAACGAGTGTTATTTAGCGAAGAGCAAAAGGAAGCTCTGAGGCTGGCTTTCCATTTGGACCCGTATCCTAACGTAAATACAATTGAATTTCTAGCGACTGAGCTTGGTTTATCATCTCGAACTATCACAAACTGGTTTCATAATCACAGGATGCGTTTGAAACAGCAAGTACCACACGGCGGACTACCTTCTGATTTACCTCCCAGAGATCAAACCGGTAATCAACAGACTTTCGATCCAGTGCAATTTAGAGTACTTTTAAACCAAAGATTAATTGAACTTTCGAAAGAAAGAATGGGCTTGAGCGGGGTTCCTCTACCTTACCCGCCTTATTTAGCAACGAACGCGAATTTAGCTGCTTTAATAAGTCGAGGATTGTTGCCACCTGGTGATATTGACTTATCGGCTTTAAATAATGCTGTTAAAGAACAAATGAGTGGTTTAGATCTTTCTATGACGTCTTTAAAAAGAGAGCCCGGCGATTATGATGATGATGACGATGTTGAAAGTAACGTCGGTTCAGATGATTCAAATATGTCGAGCGGAAGTCTTCGGGGTGAAGTGAAAACGGAGCCCAAAGAAATACCGTCGAATCAAAGCAGGTCATCGAGACGAAAACCTGCAGCACCTCAATGGGTTAATCCAAATtgggaagaagaaaaagaaaagactAATACCGGAGACGAAGTTATCATTAATGGAGTTTGTGTGATGCAGACTGGTGACGACTACGGGCGACGGAACGCCGAGGAAACCGTACGAGTGGAACCTCAAGCGGTACTGGATAGGTTCGAAGACGATCAAAGCGATACGTCTTCGATCAGTAACGATAACGAACAAACGGacaaaatagaagaaaaagaagatgtTAGTGAAATTAAAACAGAGGACAGTGAAAATAAAAACCTTAATCAAGAAAACGAAGAGGAAAGGTGGGAgtactaa
Protein Sequence: MTYPLFQINHLVEEIQRLQGCLSKLQESSMSQINLLEDQLEQKRQHILRLENKLDLQKDYEELKREVSILRSDLANNPDGKNIELLLEKSKNLSVHDTKDKSPIREIEGVDQHPPQTPTHSITPPNILPPPFQNVDAFGSLLGEEIVSSWRRNIEQNRVTPKSPSTSLDVPLKSSTPVNADSTAEKSAASTPQPSDQTCQPSPNENLVNGNPKSPQEDNNNHHVSNNNLPLSAMCTFLRNEDNLKSPYRFDDHRPTFKFAEDLGMAPGSMVGRLGESLIPKGDPMEARLQEMLRYNIDKYATQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAILLLKSLIPKKDHFSSTGKSEAGIPPYGRPDNDHPDDRFVHILNDPNFQQHIKQQQQHQHLQPLEDSHSNDDSKSPQGCSSPFSRDSSMNKRLKKYENDDISQDKVVRIYQEELAKLMGRRLEDFRGQREGPFPGLFLPHLYSGGNTLERTPEDLRLVLDAYHREFAKLNHGQNPTQMPLNLLAIQQQAIAHHQQQHQNSNGGVQDLSIPKDKMKMVNGNVDEKDKDDDPMSRHSGSAFSLVRPKIEPGTQPSTGSTASSPLGNSILPPMTPNDDFAGSAAASPLQRMASITNSLISQPPSQPHPSNNNRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGACSSIGKPMPPTNKMLSEAAGLLNKMQESQNILPPSLQLGPPQGMNPQPPPPPMLLTPPGLPPHHAINIQNQDLMKKANHSPHGIPHSPMGQQLTPLRNMHQHISPSVYEMAALTQDLDTQIITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGAGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFHLDPYPNVNTIEFLATELGLSSRTITNWFHNHRMRLKQQVPHGGLPSDLPPRDQTGNQQTFDPVQFRVLLNQRLIELSKERMGLSGVPLPYPPYLATNANLAALISRGLLPPGDIDLSALNNAVKEQMSGLDLSMTSLKREPGDYDDDDDVESNVGSDDSNMSSGSLRGEVKTEPKEIPSNQSRSSRRKPAAPQWVNPNWEEEKEKTNTGDEVIINGVCVMQTGDDYGRRNAEETVRVEPQAVLDRFEDDQSDTSSISNDNEQTDKIEEKEDVSEIKTEDSENKNLNQENEEERWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01368896;
90% Identity: iTF_00910405;
80% Identity: iTF_00910405;