Lcap019504.1
Basic Information
- Insect
- Lochmaea capreae
- Gene Symbol
- kn
- Assembly
- GCA_949126875.1
- Location
- OX421401.1:2018572-2031398[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-54 2.3e-50 173.2 0.0 6 134 18 136 14 138 0.94
Sequence Information
- Coding Sequence
- ATGTTTGGTTTGCATCATCATCAAGATGCTACCGGGTTACACCATCACCATCAACCCCGTGGACCAAGTCTCAAAGAAGAACCTCTCTCCACCGCTCGATCGTGGATGCAAGGAACAGTTTCCGATCAAAATGGGTCTCAAGTAGGTCGAGCCCATTTCGAGAAACAACCTCCTAGCAATCTTagaaaatccaatttttttcaCTTCGTCATCGCTCTCTACGACAGAGCCGGTCAGCCGGTGGAAATTGAGCGGACGGCTTTCATCGGCTTCATCGAAAAGGACCAGgAAACAGATGGTCAGAAAACAAACAATGGAATTCAGTATCGACTGCAACTACTGTTTGCTAACGGTGTACGACAAGAACAAGACATCTTTGTTAGACTTATTGACTCTGTCACGAAACaggtaaattaa
- Protein Sequence
- MFGLHHHQDATGLHHHHQPRGPSLKEEPLSTARSWMQGTVSDQNGSQVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPVEIERTAFIGFIEKDQETDGQKTNNGIQYRLQLLFANGVRQEQDIFVRLIDSVTKQVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00813504;
- 90% Identity
- iTF_00631296; iTF_00629594; iTF_00813504; iTF_01226406; iTF_00330325; iTF_01289535; iTF_01162875; iTF_00739712; iTF_00115488;
- 80% Identity
- -