Lcap019505.3
Basic Information
- Insect
- Lochmaea capreae
- Gene Symbol
- kn
- Assembly
- GCA_949126875.1
- Location
- OX421401.1:2076313-2094554[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-150 2.2e-146 490.2 13.6 182 563 30 403 28 421 0.84
Sequence Information
- Coding Sequence
- ATGTTGGAAGTTTGGGATTACATTTTTCTACAACAAAAATTCGACCATTTGGTCGGCAACAATGGATTCCATTACTTTGGAGATAATGGattTTTCCtcaagttttttctaaaatgtaACCAAAACTGTTTGAAAAATGCCGGAAATCCACGAGATATGCGAAGGTTCcaggtagtaATATCGACGCAAGTAGCTGTAGATGGTCCACTCTTAGCCATTTCCGACAATATGTTTGTACATAATAATTCAAAACATGGAAGGAGGGCGAAAAGGCTGGACCCTACTGAAGGCCAATTTCCAGGACTCTACCCGCCTCTTCCAGTcgcaacaccctgtataaaagcGATCAGTCCCAGCGAAGGATGGACGGCCGGTGGATCGACGGTTATTATAGTGGGAGATAACTTTTTTGATGGACTACAAGTCGTGTTTGGTACAATGCTTGTATGGAGCGAGCTAATAACACCGCATGCAATACGGGTTCAAACACCGCCTCGACATATACCGGGAGTAGTGGAAGTTACGTTATCGTATAAATCCAAACAGTTTTGTAAAGGAGCTCCTGGTCGATTTGTATATGTTTCCTTAAACGAACCAACGATAGACTACGGAtttcaaagattacaaaaactcATACCGAGGCATCCAGGAGATCCTGAGAAGTTACCTAAAGAAATAATATTGAAGAGAGCAGCAGACTTAGCAGAAGCCTTATACTCGATGCCTCGGAACAATCAACTAACTTTATCGGCGCCGAGATCGCCGACGATGGGCAACAATGGTATGACTTCGACATTTAATGCGTACACGGGCCAGTTGGCTGTCAGCGTTCAGGACAACGGAAACGGTCAGTGGACAGAAGAAGACTACGGGGGGCGAACACAAAGTAGCAGTGTATCTCCACGCGGAGGTGGCTACTGTTCTAACGCCTCAACGCCTCATTCTTCGAACGGAGGAGGTTCGTATGCGGGCGGAAGTAGCGGAGGTAACATCAACGGAGGCTATGGTGGAGCTACGCCAACCAGCAGCTCGCAATTATCCAATATGCTACCGGGATCGCCGTCAGCTGGGATTTTTAACTCGGCACCGATATCTACAGAATCGCCTCAGTATCATTTCACTTCTAATTATACCAAACACGAAAatgtggaaaaagaaaaaagcgCTTTTGCACCAGTTATTAGAGGGGGTGAATCACCCCCTGCACCTGCGCCTGCTCTATTTCATCATCAGTCTATTTCCGGTTGGCATCATTTAGCCGTACAGTGttag
- Protein Sequence
- MLEVWDYIFLQQKFDHLVGNNGFHYFGDNGFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGQFPGLYPPLPVATPCIKAISPSEGWTAGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLTLSAPRSPTMGNNGMTSTFNAYTGQLAVSVQDNGNGQWTEEDYGGRTQSSSVSPRGGGYCSNASTPHSSNGGGSYAGGSSGGNINGGYGGATPTSSSQLSNMLPGSPSAGIFNSAPISTESPQYHFTSNYTKHENVEKEKSAFAPVIRGGESPPAPAPALFHHQSISGWHHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01014036;
- 90% Identity
- iTF_00458604;
- 80% Identity
- -