Lcap031953.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lochmaea capreae
Gene Symbol
Arid4b
Assembly
GCA_949126875.1
Location
OX421404.1:21212147-21234443[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.1e-26 3e-22 80.5 0.1 1 89 295 380 295 380 0.95

Sequence Information

Coding Sequence
atgCAGGTAGACGACCCTCCTTATTTATCTGTTGGAACTGCTGTGAGTGCTAAGTACAAGGGTGCTTTCTGTGAAGCTAAAGTTAGCAAGGTTGTTCGACTAGTAAAGTGCAAGGTAACCTACAAAATGGGATTGGGAACTGCAACACTTACAGATGAACAAATTAAAGGTACTCTTAGAGTTGGCCAGCTTGTTCAGGCAAAATATCAAGATAAAAAAGAGCTTGTGGAAGCAACAATTACTAAAATTCAGGATTGCAGCCAATATACTGTTGTGTTTGATGATGGTGATATAACAACTCTGAGACGTACTGCATTGTGTTTGAAAAGTGGTAGACATTTTAATGAAAGTGAGACATTAGACCAGCTACCCTTAACCCATCCAGAACATTTTGGAAACCCTGTTGTAGGAGGTAGAAGAGGCAGACGAAATAGACAACTAAAGGAAGACAGTAGTGAAGGTGAagtagaagaagaaaatgaaCCAGATCTCGAAGCATATATGTTGGATATTAAGAGGGTTGTGAGTGTGGAAACTACAGAGAAAAAAAGGTCCAGAGATAGTTGGTTTCCTGGTCTTGTTGTTATTCCTTCAGCGCAACCCACAGTTAGAATTAACATGAAGGATGAATATCTGATAAGATCTTTTAAGGATGGGAGATATTACACCGTACCAAAGAAGGAAGTTAGCGATTTTAACAGAGAATTAGCTGAGAAAGTTGATAGTGCAGTATTGGTGGAAGCTATTAACAAGgcaataaaatttttagatCACAATGAACTTCCACCACATTGGGAAAAAAGTTCCTTATTTCATTCTCATTCAGTTGATAGTGAAAGCGACGAAAATTACACGGATAGCTCAGATGATGAACCAAATGAGGAGAAAGATCGCTTTGTAGCTCAGTTGTATAAATTTATGGACGAAGCTGGTACCCCCTTAAATAAAACACCAACCATTTCAAATCATGATATTGATCTTCATCGGCTGTTTCGTATTGTAGAAAAAATGGGAGGTTATAATCGCGTTTCCAATCAAAATAAATGGCGAACGGTCAGTCTTCGTTTGCATCTACCTGGAAATCAAAACACATTCAATCAAGTTAAGGCAGTATATAAAAAATGCCTTTCGAGCTATGAAACTTTTTACCGAACTTTGGGCGTAACAATGTTAAATGATACAAGGCCAACGAAGAAAAATAAAGGTAGGAGTTTAATTCGCGACCGAGACAGAACTACTCCTATTAATAGCCCCGCACCTGAAAAAGAAGAACTACCGATAGAGGAAAAGAAAGAACTTTTAATCAAAgataattttcaagaaaaagtaAAACGTGTTGAAAAGAAAAGGATACCTCCTTTGGCGGAAGTTAGCGATACTAATTCTAGTGATACTTCAGAGCAGGTTGATATTAAAGAAGTTccgaaaattaaaaaagaaaaaccaGAAAGCAAGATTCTTCCCATTAAAGATAAAAAGGGAAAACTACCAACAactgaaaaaattaaacctATTGTCGAGAAACTCGAAGAGCAAATtaaaaaggaagaagaaaagGTACAAAATACTCGATCTAAGGCCCAATCCAAACAAAAAGAAAGCTTAGCTTCACCCGTTGAGATAATTAAAACAGAAAAGAAGCCGGAATCTAAAATTCCTACTAAAGATAGTAAAATAATAACAGTTAAAACTACTAAAAAACTAGTAGCGCCTTTGATTCCGTCCgaggaagaaaagaaaagagGCAAGAAACGTATTGCAGACGAAAGAGCATTTCCGACTGGCAGTCAAATAAGTGAGATACCTGCAACGTACAACATTAATGTAGGTGATAAACTCAAAGTTTTCTATGGATCTTCAAACGAATCTAAAATTACTTACGAGGCTAAAGTAATCGAAATTGATAAAGATCAATCTGGACAGATATATTTGGTACATTATACAGGATGGAATACGAGGTATGATGAATGGATTCAATACCAAAGAATAGCGGAAAATTTGAGTGCTACTAAGAAGGCTAAACGCTCGAAACAAAGTAGTGCTTTATTAGCTGGAAATTCTATGAGTCCAATTCCCAAACCGGCATCTAAAAGAACGCGAGTTACTTCGACTTCTGCTAGATCTTCAACTGCGGAACCCCCTAGATCTACAACACCTTCCAGTGTTACATCTTCAGGTAGTAGAACTAAGAGTCCTGCTACTCCAGCTACAAGGTCAACTGGTCGGTTAAGACAAGattctCTTAGACGCACAAGAAGAATATCAGCCCAGACCGATATTTCAACACACACTGAATCTGAAAGTGAAGGAACAGGAAGTGATTCTGAAGTATCAAAAACAAGAAATGGTACCAAATCAgataatgaaattaaaacatATCGAAGAAGACCACCAAGACCTCCAATATTGCCAAAAACTGATAAACGTAAGGATCGGGACGAGGAAGACATTGGAAGAGAAGAACAAGATTCGAAACCTTCCAGATCATCCCGAAGAATAAAAAGGTCCCCAGAAAAATCTGCCGAAGAAAGTGAAGATGAAAATAATCCCAAAGGTCGAGATTTTGATCTAAACCAAATTCGATCAGAATTGAAAGGCTTCACTAAAGCTATGAAGCTGTCTAATTTGGATGCAGACGACGAGAAAGAATTATTATGTTCATCATCTGATGAGTCAAATCCACCACTTTTAGACAATGCTACACATATTGATGATGAAATTGAGGAGAAGGCAGAAAAACCATTTGAGAAATCATCCAGCTCTGAAGATGTTTATGAATTCAAAGAACCCGAACCGTTCGAATTTGAAAGCAGAGCTAAATTAGGCGATGAAAAGAAACGTTTAGTATCCAGGTTGTTCGAAGAAGTAGATAAAAGTCCACCACTGCGTAATCTTGAAACTGAGAAAATTATGCGCCCATCTAGAAGAAAACCGAATGAATTTGATTCTGAAAATGAAGAGGAGGATGAACAGGAAACATTGATTCCCATGTCACCTCctaaagaagaagaagaagatccTTTTGATAAACTCGTCGAATCACCCAGTTTTAATTTGGTTAAAACCACCGAAAGGGTcatagaaaataaagaaaaagttacGAGGAATATATCGGACGATTCTTTAAGTCTATTTAGGGATCTTCCACCAGATGCATCAGATGATTACAGCGGTGATATGGAACTGTCAGATTGTGAATCACAAACTCAAATATTTGCTACGAGTCCAGAAAAAATTAGTGGATTAGAAACCGGTAGTTTGTTTGGAAGCGGTAGTTTTTCTAAACCCTCGCCTGACGAAAATATACTCGACTTGGAATTTTCTTCCTTGGGAAAAACAGATGAAGGTGCGGCGTCGTATCCTTCAGATGAAGATTCAATAAGGGAACAAATACAAAGAGTAATTGCTCAAAGTTCTTCTACTGACGATGATAGTAACGATGACATGAATTTACTTCCTTCAACTTCCGGAAGCTTTAACCTGAAGAAAACTCGTACACAGTCTTTAAATAACGTTACTAGTATTTTGGGAGTTAACGTATGTGAACCTTTACCGAAAAAAGACGTTGAAGTTACTACCGAAGAGGAATCCAAAGAGGAGGTAAAACCCATTTTGGCTCCGGAAATTAGTCAAAGTGACGTTATAAGTTTTGTTGAAGTGCAACACATTTCTCCGGCCCTACAAGAAACCGATAGTGCCCTATTGGAATCTATAGTTTCACATCCTCCGATTTCTCTGAATGTGAAACTAGAAGAAACTGCCAAAGAATTGAGCAACGTTAAAACTGGAACAAAGATCGCCGATTCGATATTACagaaatttaattcaattaaaaacGAGACTAGTGCGAAAGTTTCACCTAAAttggaaaaagaagaaaaggagGAGCTTAAAGAGACTACGATTGAAaCAACGACGTTAATCAAAGAAGATCCTAAATTATTACATTCGGAAGATACCAGAGATTCTTCAGACGCGAAATTACAATCGACAGTAGAGTCAAAGTTCGAGGAGAAGGTAGAGGAAACACCCATCACAACCACTTCCATTGAAGAACTTGCTAAAAGCGCTTCTCCAATAGCAAAATCTGAAATCACGGacgttaaaaaaagaaaaaaagttttgagtAGAAGTTACGTTGAAGACAGCGATACGGACAGCAGTGATTCTGAACAGTTAATAATAGCCAGATCCGATGACGATTCTCAAACTGCTTCTATCAAATTGCAGACGGATACTAAAGAAAGTGACAGTAGCAATATGTTTACACAAATTCAAACCACCGACGATTCCCAATCTCAAGAAACTGACTTTAATTTCGACGTTAAAAAGGATGCTCTAGACGTATCTCCTCCCGCAGCAGAAAAAATAGAATCAGAAGCGTCCAAAGAAGAAGAACCTGATCCTAATCTGCATTCGCTACTTCTCTGCGAAGAAGTAATTCCTAGAAGCCCAGCGCCGCTAAGTGATCCTTCAGTTGTTCATGAAACAAAATGTGTCAAGTCAGTTTTGGAAATGCCCTTCGCTAGTGCACCAAGTACCagcaataataaaaacattctcTTGGATCAGAAAAAAAGTCAACCGCCAGTTTCTGTGGCCGTTGATGTACAAGAAATTAGGGAAGATCGGTTGGAAAATTCAACGATTGTTGATAACACACCTCCTACTACGCCAGAAAGTACTATTAGCAATTTATCACCCAGAGGgGATATCGAAGGTTTGTCTCCGAATATGGGAGATAATGAAAGTTGCAAGTCGCACGATATTGAATCTGAATATCCCGAACAAAGATCTTCATTATCTAAAGTATCACCGTATAGCGAAGAAGATACTCAAATGATGggtgaaataaagaaaaatatttcttgTAAAAAGAGGCGGAAATCTTTAAGAAACTCTGAAGATACTTTACCatcgaataataaaaaaaataagaaaagtaGATCGAGACATAATAGTGATAGTGATAGTTCTGAACATTCGAATACTGGTTGCACTAAAGTATCGTATAACAGACAGAATAGATCTCCAAGGCCTTCCAAATACAACTTTTACGTCGAGTTTGATCACTGTTTGGACAGTGGTCAGCGGATAGCAGTGCTTCAACAAAAATTggcagaattaagaaaaacatatGCTGATGTTAAAGCAGAACTTGCCGCAGTTGAaaggagaagaaaaaaaattagaagacGCGAAAGAGAAGcgCTAAAAGCTGCCAAACAAGAACTAACGTGTATATGA
Protein Sequence
MQVDDPPYLSVGTAVSAKYKGAFCEAKVSKVVRLVKCKVTYKMGLGTATLTDEQIKGTLRVGQLVQAKYQDKKELVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRNRQLKEDSSEGEVEEENEPDLEAYMLDIKRVVSVETTEKKRSRDSWFPGLVVIPSAQPTVRINMKDEYLIRSFKDGRYYTVPKKEVSDFNRELAEKVDSAVLVEAINKAIKFLDHNELPPHWEKSSLFHSHSVDSESDENYTDSSDDEPNEEKDRFVAQLYKFMDEAGTPLNKTPTISNHDIDLHRLFRIVEKMGGYNRVSNQNKWRTVSLRLHLPGNQNTFNQVKAVYKKCLSSYETFYRTLGVTMLNDTRPTKKNKGRSLIRDRDRTTPINSPAPEKEELPIEEKKELLIKDNFQEKVKRVEKKRIPPLAEVSDTNSSDTSEQVDIKEVPKIKKEKPESKILPIKDKKGKLPTTEKIKPIVEKLEEQIKKEEEKVQNTRSKAQSKQKESLASPVEIIKTEKKPESKIPTKDSKIITVKTTKKLVAPLIPSEEEKKRGKKRIADERAFPTGSQISEIPATYNINVGDKLKVFYGSSNESKITYEAKVIEIDKDQSGQIYLVHYTGWNTRYDEWIQYQRIAENLSATKKAKRSKQSSALLAGNSMSPIPKPASKRTRVTSTSARSSTAEPPRSTTPSSVTSSGSRTKSPATPATRSTGRLRQDSLRRTRRISAQTDISTHTESESEGTGSDSEVSKTRNGTKSDNEIKTYRRRPPRPPILPKTDKRKDRDEEDIGREEQDSKPSRSSRRIKRSPEKSAEESEDENNPKGRDFDLNQIRSELKGFTKAMKLSNLDADDEKELLCSSSDESNPPLLDNATHIDDEIEEKAEKPFEKSSSSEDVYEFKEPEPFEFESRAKLGDEKKRLVSRLFEEVDKSPPLRNLETEKIMRPSRRKPNEFDSENEEEDEQETLIPMSPPKEEEEDPFDKLVESPSFNLVKTTERVIENKEKVTRNISDDSLSLFRDLPPDASDDYSGDMELSDCESQTQIFATSPEKISGLETGSLFGSGSFSKPSPDENILDLEFSSLGKTDEGAASYPSDEDSIREQIQRVIAQSSSTDDDSNDDMNLLPSTSGSFNLKKTRTQSLNNVTSILGVNVCEPLPKKDVEVTTEEESKEEVKPILAPEISQSDVISFVEVQHISPALQETDSALLESIVSHPPISLNVKLEETAKELSNVKTGTKIADSILQKFNSIKNETSAKVSPKLEKEEKEELKETTIETTTLIKEDPKLLHSEDTRDSSDAKLQSTVESKFEEKVEETPITTTSIEELAKSASPIAKSEITDVKKRKKVLSRSYVEDSDTDSSDSEQLIIARSDDDSQTASIKLQTDTKESDSSNMFTQIQTTDDSQSQETDFNFDVKKDALDVSPPAAEKIESEASKEEEPDPNLHSLLLCEEVIPRSPAPLSDPSVVHETKCVKSVLEMPFASAPSTSNNKNILLDQKKSQPPVSVAVDVQEIREDRLENSTIVDNTPPTTPESTISNLSPRGDIEGLSPNMGDNESCKSHDIESEYPEQRSSLSKVSPYSEEDTQMMGEIKKNISCKKRRKSLRNSEDTLPSNNKKNKKSRSRHNSDSDSSEHSNTGCTKVSYNRQNRSPRPSKYNFYVEFDHCLDSGQRIAVLQQKLAELRKTYADVKAELAAVERRRKKIRRREREALKAAKQELTCI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00458648;
90% Identity
iTF_00735262;
80% Identity
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