Lcap003750.1
Basic Information
- Insect
- Lochmaea capreae
- Gene Symbol
- -
- Assembly
- GCA_949126875.1
- Location
- OX421396.1:8697769-8698329[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2 4.9e+03 -0.7 0.0 28 45 2 19 1 25 0.53 2 3 2.4e-08 5.3e-05 24.8 1.1 26 63 21 58 11 60 0.89 3 3 1.3 3e+03 -0.1 1.1 41 58 144 161 129 171 0.73
Sequence Information
- Coding Sequence
- ATGGAACAATTAATGAGCAAACTGGAAGAAATGGATGCAAGGAATGctagaattgaaaataaaatagacGGGATGTATAAACAAATCGAACAACTAAAGAAAGAGAATATGCAGTTAAAAAGGGAAAATGTTGACTTGAGAGGAGAAACagaatatttaaatgaaaagatCATACAGATTGAAAAGTGTCTAAGGAAGAAAAATGTTATAATACATGGAATTATGGAGGAGGAACAGGAAAGCAAGATACAGTTGGAGAATAAATTGAAGAACATCATTAGTAAAGTGAACAGCACGATTGATGTAAAAACTGACGTAATTGAATTCAGGAGAATTggtggaaataacaaaaatagaccTGTTTTGATGGAAATGAAAGATTGGGATAAGAAAATGGATATCCTAAAAGAAGCTAATAAGTTAAAAGGTCAACGAAGATTATCCAAAAGAAATACTACAGCAGAGAAAGAGCTTAATCAGATACATGAAAGAGGCAAGAGACAGCGGACAAAAAGTGAAACTGGTTTACAACAGATTGTATATAAATGGAAAAGAGTATAA
- Protein Sequence
- MEQLMSKLEEMDARNARIENKIDGMYKQIEQLKKENMQLKRENVDLRGETEYLNEKIIQIEKCLRKKNVIIHGIMEEEQESKIQLENKLKNIISKVNSTIDVKTDVIEFRRIGGNNKNRPVLMEMKDWDKKMDILKEANKLKGQRRLSKRNTTAEKELNQIHERGKRQRTKSETGLQQIVYKWKRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -