Lcap023842.1
Basic Information
- Insect
- Lochmaea capreae
- Gene Symbol
- cnc
- Assembly
- GCA_949126875.1
- Location
- OX421402.1:24485158-24487716[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1 9.2e+03 -1.6 0.4 33 48 210 225 207 230 0.57 2 2 2.2e-15 4.8e-12 47.3 8.0 3 64 265 326 263 327 0.92
Sequence Information
- Coding Sequence
- ATGTATACCATGCGCATGTTGGATGGTAACAGCACAGTAAACAACGTAGGAACCAATAATACCGCAACAACGATGTCACGAAACGAGATGGAACGTATGGATACTTCAAGCGATAGCGCAGTCAGTTCTATGGGATCAGAAAGAGTACCATCACTTTCCGACGGTGAATGGGGGGACGCTGGTTCCGATTCTGGACACACTTCTACTGAACATTATGTTACTGATTACACATCAAAATTGCGACCATACGATTACAGTTATACCAGCCGACAATTAAATAATGGCTTGGGAAGCACAGACAACCCCAGAATTCCGCCTGTAGCACAAAAGAAACATCAAATGTATGGTAAGAGGTACTTCCAAGACCACAACTCGTTAAACGCATCACAGCCTCCCGCCACATCTTTGAAATACGAATACAGAGAACCCGCTTCGGCTTATAACATTAATAATCAATCAGAAGGCGCTGTTGGACCTAAAATtccagaaataaaatattcctgtTCTATGGAATTCGGCATCCAAAGTCACTTGACAAGAAATCCTGGTAACCACATTCAACACAATCATACATACCATCTGCCAGCTGAAAGTTCGGGTGCCATGCAAAGACCAGTTATTCGAGATAAAGCAAAACAGCGAAAATCTGAGGATGAGCATTTAACTCGAGACGAGAAACGTGCAAGAGCATTGAGCGTTCCTATTACCGTTGACGACATAATAAACTTACCAATGGACGAATTCAACGAACGTCTTTCAAAATACGATCTCAGCGAAGCTCAATTAAGCCTAATTCGGGATATTAGACGAAGAGGAAAAAATAAAGTTGCCGCTCAAAACTGCAGAAAAAGAAAGTTGGATCAGATCTTGAGTCTGGCAGACGAAGTAAAAGAAATGAAGGATAGAAAAATGAGGTTAATCGCTGAACATGAATACGCGAAAAATGATTGCAAGCGTCACAGAGATAAATATCAACAACTTTACAGACATGTTTTCCAAaATTTACGGGATCCCGATGGTAACCAGTATTCCCCATACCAATTCAGTTTACAGACATCGGCTGACGGATCAATAATAATGGTTCCTAGATCGAATTCCACCGTATCGAATTCTGATCCAAAGGACCCTCTTCAGAACCGCAAGGAGCCGTAA
- Protein Sequence
- MYTMRMLDGNSTVNNVGTNNTATTMSRNEMERMDTSSDSAVSSMGSERVPSLSDGEWGDAGSDSGHTSTEHYVTDYTSKLRPYDYSYTSRQLNNGLGSTDNPRIPPVAQKKHQMYGKRYFQDHNSLNASQPPATSLKYEYREPASAYNINNQSEGAVGPKIPEIKYSCSMEFGIQSHLTRNPGNHIQHNHTYHLPAESSGAMQRPVIRDKAKQRKSEDEHLTRDEKRARALSVPITVDDIINLPMDEFNERLSKYDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQILSLADEVKEMKDRKMRLIAEHEYAKNDCKRHRDKYQQLYRHVFQNLRDPDGNQYSPYQFSLQTSADGSIIMVPRSNSTVSNSDPKDPLQNRKEP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00721756;
- 90% Identity
- iTF_00458616;
- 80% Identity
- -