Lhal002180.1
Basic Information
- Insect
- Lobophora halterata
- Gene Symbol
- grn
- Assembly
- GCA_932525835.1
- Location
- CAKOAV010000004.1:8060078-8070851[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7 7.4e+03 -3.2 0.0 22 26 38 42 33 43 0.66 2 2 2e-19 4e-16 58.5 7.0 1 34 69 101 69 102 0.98
Sequence Information
- Coding Sequence
- ATGAGAATCACTATAGACGTTCTAAGTGGAGTCTCATTGGACATGTGCGTTGGCAACCCTGAATCGGATGTCCGTGAATCAGGGCTGCCACCGCAGCCTGGTGGTCCGCGCGTCACCAACGCGTGCTCCGCACAGCTCGCATGCATCAACCCTGATCATTTGCATACTTCGCTGCAGAGTGCGGCGCGGAGGGCTGGCACGTCGTGCGCGAACTGCAAGACTACCACCACCACGCTCTGGAGGCGCAACCAGAACGGAGAGCCCGTCTGCAACGCGTGCGGACTCTACTACAAACTACACAACATAACCGGGGGTCCGCATCCGAATGGCAAACCCTACTACGCTTGGCTAATGTGTCATAAAACCAGCGCTATTCTCCCCGATGAATTACGATCGTGA
- Protein Sequence
- MRITIDVLSGVSLDMCVGNPESDVRESGLPPQPGGPRVTNACSAQLACINPDHLHTSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNITGGPHPNGKPYYAWLMCHKTSAILPDELRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -