Lhal002178.1
Basic Information
- Insect
- Lobophora halterata
- Gene Symbol
- grn
- Assembly
- GCA_932525835.1
- Location
- CAKOAV010000004.1:8034842-8048348[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-19 2.2e-16 59.3 4.7 1 35 222 255 222 256 0.98
Sequence Information
- Coding Sequence
- ATGCCTCCGAATGCGTCGAACAAAGCAAGATGGAAACACATAGCTGAAGCTGCCATTCATCGAGACCCGATTACGAACCACGACCACTCTGCCAAGAGTTCCCGACTAGGAAGAAGTCGAACGCTGGGCGGCGGTAGTGGTCAAGTGTGCAGGCCCCACTTCCATACACCGCTACACCCATGGCTGGACTCCAAAGCCCTCGGTAGCGGCGCGTGGGGCAGCGGCTTCAACCAGGATGCGGCGCAAGCCGACAAACCTCTCTCCCCAGCCCAGCACCACCATCCCCATCCGCTATTCTCCTTCCCTCCAACACCTCCCAAGGATTCTACGCCAGATTCCGTGGCGGCGGCGGCGCTCGGCCAGCAGGACTACCAAGCGGCCGTCGCGCACGCCACCGCCATGAGCGTCGCCTTCATGCAGCAGCAGCAGGAACTGCCGCTCTGTGGGGACGTCAAGCCCATGATGGGCGGGCCTCCTTCAAAGCAACGGGAAGGTGCGCAGCCGGACGCGTGCCCCCAGGACAGCCAGCCCTCCGGGGAATATAACTCCCAGTACAACGCCGCCGGCGGCGAGTACTACAACTACCAGGGCAAGGGGTATAGTGGGCAGCAGCAGAGCAAGCCGCGCCCGAACAAGACGCGAACAAGCGCCGAGGGTCGGGAGTGCGTTAACTGCGGAGCAACCAGCACACCTCTCTGGCGAAGGGATGGCACGGGACACTACCTCTGCAACGCCTGTGGACTCTATTACAAGATGAATGGGCAAAACCGGCCGCTGATCAAGCCTAAACGAAGATTGTTAAGGGGCAGTAATAAAAAGGCGGAGCATGTATACCCGAGCACGACAAAGCATTAA
- Protein Sequence
- MPPNASNKARWKHIAEAAIHRDPITNHDHSAKSSRLGRSRTLGGGSGQVCRPHFHTPLHPWLDSKALGSGAWGSGFNQDAAQADKPLSPAQHHHPHPLFSFPPTPPKDSTPDSVAAAALGQQDYQAAVAHATAMSVAFMQQQQELPLCGDVKPMMGGPPSKQREGAQPDACPQDSQPSGEYNSQYNAAGGEYYNYQGKGYSGQQQSKPRPNKTRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLLRGSNKKAEHVYPSTTKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01439563;
- 90% Identity
- iTF_00697933; iTF_00267793; iTF_01529734; iTF_00661903; iTF_01528861; iTF_00702555; iTF_01205364; iTF_00698841; iTF_01203708;
- 80% Identity
- -