Lhal010778.1
Basic Information
- Insect
- Lobophora halterata
- Gene Symbol
- CAMTA1
- Assembly
- GCA_932525835.1
- Location
- CAKOAV010000025.1:153820-157591[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-18 4.1e-14 52.5 1.7 40 80 2 41 1 58 0.93 2 2 0.22 2.2e+03 -1.5 0.0 56 68 64 76 42 78 0.76
Sequence Information
- Coding Sequence
- ATGCTGCTGTACAGTCGGAAGAAGGTCCGGTACAGGCGGGACGGCTACTGCTGGAAGAAGCGTAAGGACGGGAAGACCACCCGAGAAGACCACATGAAGTTGAAGGTCCAAGGAACTGAGATCGCGTACAGCGGCCCGGGCCGCCTCACCACTGCCGCGCGCTCTCACCGCTCTCAACGCTCTCCTGGACTGTGGTCCAGGAGACGAGAGGAGAGAGAGAGGAGAGAGAGAGGAGACCCTGGTCTAGACCTCTTCGCGGATACTTGGACGAAGATTTTGTCGGAATGTTTGAGGTTTTGTGAGCGAGATGTATGA
- Protein Sequence
- MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTEIAYSGPGRLTTAARSHRSQRSPGLWSRRREERERRERGDPGLDLFADTWTKILSECLRFCERDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -