Lhal017668.1
Basic Information
- Insect
- Lobophora halterata
- Gene Symbol
- ttk
- Assembly
- GCA_932525835.1
- Location
- CAKOAV010000047.1:881076-914636[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.4e-05 0.13 12.2 0.0 10 38 433 461 432 465 0.85 2 3 0.00055 1.1 9.2 0.0 20 38 476 494 474 499 0.86 3 3 0.083 1.6e+02 2.2 0.0 11 38 566 593 562 595 0.87
Sequence Information
- Coding Sequence
- ATGGTGCCGCAACAGTACTGCCTGAGATGGAAACACCACCACTCCAACGTACAGAATATGTTCGCGCAACTTCTGGAAAAAGAGAGGTTCTGCGATGTCACATTATACTGCTCTCCGAGCTTCGCGGCGCAAGTCCCGAACAAAGACACGGTGGAGCCACATAGCATCAAAGGGGTGTCGCTCAGGGCACACAGAGTGGTGCTAGCGGCGTGTTCAGAACTCCTGGGAACTCTATTAGGGGCTCACGAGGCGCATGGAGAACCGGTTTTGGTGATAGACGGTGCGGAACCAAAGCATCTGAAGGCACTACTGGACTACATGTACACTGGAGAAATGAATGTGCACCATTCCCAACTGGCGAGCCTCCTCAAAACAGCTGAGGAGCTGCGAATCAAAGGTCTAACAGATATCCGGTGGAGCAACAAGGACGAGCCTCCCGACTGCGCAACAGGTACAGTCGCGACTACAACTGTACCCAATCAAGACGCAACGGAGACCGAAACGCGTACAAATGCAGACAAGCCGGAACACAAGAAACAAGAAGCCAAGAGACCAGAAGCACAAAAGCAAGAAGCAAAGAAGATAGAAGCGAAGAAGCTAGAAGCAAAGAAGTGTTCGCCAGAACGGTTGACGGTCAACGATTCGCTACCATCAGAGCCTAGGAGTGTCAAAGACGAGAATGATAGATTTAGCGTCAACGGTGGACCACCGCCATTGATAAAACTCCCCATAGCCAAGAACACAGCGACACCAAAACGAGATTATTCAGATTCTGAGAGTCCTAGTCCTAAAAGACAGAGGTTGACGAGCACTACTGAACAAACTGACGACGAAGCCAATGGAATCAAAATGGAACGTGATTCAGAATGGCAACATGGAAACATGGATATATCAGCGTCACGCGTCTGCAGTTGGGGCGCGGAATCTGCGGACTCGCGCGACGGATCGGACGACGAGTGGGCCGACGCGCCCACCGACATCGGCTCATTCCTGCACACGAGGCTCCGCGTGGACGGAGACAATAGTGCAGATGACGAGTCCAACGACAGTAGAAGCAATGAGTATCCGATGAGAGACTGTCCCTTACCTGTGATTAGTAGCGTGTCGCACGCCACTGCGCCCGCTCCACCGGCTCTTGTCAAGACTGAGTTTACACAAGCTGCTATGAAAGCCACGACGGGACCAAAATCCGGTCCCACGGACCCACGGTTCACTGACGTCATCAAGCTGAACGACTACCTGCAACACGGGAGACGGCCACAGTTCTGGGAAGAGAACTACGTCAAACGGGTCATGGAAGCAGTGAGATTAAAAGAACTAGAAATGAAACAAGCGGCGGAGATACTAGGGGTCAGCTACGGGACCCTGTACGGGCGGTACCGGGACGTGTACGGGTGCATCAACCGGCCCTATAGTATAGACATGAAGCGAGCGGCGGAGATACTAGGGGTCAGCTACGGGACCCTGTACGGGCGGTACCGGGACTCTGTACGGGCGGTACCGGGACTCTGTACGGGCGGTACCGGGACGTGTACGGGCGGTACCGGGACCCTGTACGGGCGGTACCGGGACCCTGTACGGGCGGTACCGGGACTCTGTACGGGCGGTACCGGGACGTACCGGGACAAAGACAACTCCTGGATGAGGGCTGTCCGCGATTTCTGGCAAGTGAAAGGACCCTCGGAAGTGCTGGAGCGACTCCAGCGCGGCGAGATCACGCTGGACAGTGCGGCCAGCGCGCTGGGCGTCAGCGCCTCCAACCTGGCCGCGCACGTGCAGGACTTCCCCGTATCCGCCACCCTGGACACGATAGACTTCGAGCCGATCCCCATCGAGGTGGACCCCTCGCTGCGGCCGCGCGCCGCCGGCGGGGGCGGGGGCGGGGGCGGGGGCGGGGGCAAGCTCAACAAGAAACATGATAAACCGGAGCAGTTGCAGTCGCAGGCGATTCTCAACGAAACTTTGTACGCGCGCTCGTTGGTGAAGATAGCCCCTAAGGTGGTGAAGTGCCAGGCGGCCAGCGCCAGCGACGACGACGACCACATCCCCGCCACCATCATCTCGGCCGAGGCGCGCGAGCCCGCGACCACGCCCGCCGGTGGTAAATGGCCATCCATCCGTGTGGCATCCATCGACAGTCTACGACCAGAAGCGCCATCTGCCTCGCAGCTGATGCGCACGCGCCCCGACCTCACCATCGTGCCAAAGAGGCCGGACCATGAAAACACGTGA
- Protein Sequence
- MVPQQYCLRWKHHHSNVQNMFAQLLEKERFCDVTLYCSPSFAAQVPNKDTVEPHSIKGVSLRAHRVVLAACSELLGTLLGAHEAHGEPVLVIDGAEPKHLKALLDYMYTGEMNVHHSQLASLLKTAEELRIKGLTDIRWSNKDEPPDCATGTVATTTVPNQDATETETRTNADKPEHKKQEAKRPEAQKQEAKKIEAKKLEAKKCSPERLTVNDSLPSEPRSVKDENDRFSVNGGPPPLIKLPIAKNTATPKRDYSDSESPSPKRQRLTSTTEQTDDEANGIKMERDSEWQHGNMDISASRVCSWGAESADSRDGSDDEWADAPTDIGSFLHTRLRVDGDNSADDESNDSRSNEYPMRDCPLPVISSVSHATAPAPPALVKTEFTQAAMKATTGPKSGPTDPRFTDVIKLNDYLQHGRRPQFWEENYVKRVMEAVRLKELEMKQAAEILGVSYGTLYGRYRDVYGCINRPYSIDMKRAAEILGVSYGTLYGRYRDSVRAVPGLCTGGTGTCTGGTGTLYGRYRDPVRAVPGLCTGGTGTYRDKDNSWMRAVRDFWQVKGPSEVLERLQRGEITLDSAASALGVSASNLAAHVQDFPVSATLDTIDFEPIPIEVDPSLRPRAAGGGGGGGGGGGKLNKKHDKPEQLQSQAILNETLYARSLVKIAPKVVKCQAASASDDDDHIPATIISAEAREPATTPAGGKWPSIRVASIDSLRPEAPSASQLMRTRPDLTIVPKRPDHENT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00909840;
- 90% Identity
- iTF_00909840;
- 80% Identity
- iTF_00909840;