Lqua018783.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lithosia quadra
Gene Symbol
nfxl1
Assembly
GCA_963576445.1
Location
OY754896.1:891359-893830[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 2.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.014 1.8e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 20 3.1e-07 0.0039 17.7 15.9 3 19 186 202 185 202 0.95
4 20 1.4 1.8e+04 -3.6 1.1 6 10 227 231 226 232 0.51
5 20 7.8e-07 0.01 16.4 12.8 3 19 239 255 237 255 0.92
6 20 1.3 1.7e+04 -3.5 1.8 6 10 280 284 279 284 0.89
7 20 5.8e-08 0.00074 20.0 12.4 1 19 290 308 290 308 0.99
8 20 6.7e-07 0.0085 16.6 16.1 3 19 345 361 337 361 0.86
9 20 2 2.5e+04 -5.3 2.2 5 10 384 389 384 389 0.88
10 20 6.7e-05 0.85 10.2 20.3 1 18 395 412 395 413 0.97
11 20 4.5e-10 5.7e-06 26.7 14.0 1 19 422 440 422 440 0.99
12 20 0.13 1.7e+03 -0.4 5.8 10 19 489 498 487 498 0.88
13 20 8.4e-05 1.1 9.9 4.4 1 11 508 517 508 518 0.97
14 20 0.35 4.5e+03 -1.7 3.3 14 18 547 551 547 552 0.85
15 20 0.37 4.8e+03 -1.8 0.2 7 11 567 571 567 572 0.79
16 20 1.6 2.1e+04 -3.8 0.6 6 10 578 582 577 583 0.57
17 20 0.003 38 4.9 4.5 1 11 588 598 588 599 0.97
18 20 0.00019 2.4 8.7 18.0 3 18 629 645 628 646 0.88
19 20 2 2.5e+04 -6.5 3.4 9 13 652 656 652 656 0.71
20 20 1e-05 0.13 12.8 11.8 1 16 687 701 687 706 0.89

Sequence Information

Coding Sequence
ATGGCGCGCCGATATCGAGATGCAGCTGCAAAACTGCAACAAAATGTTCAAAAACACTTAGAAGGCATGAAGGAGCTTTCGTCTTCCGAAGAAGACGAACCGTACGAATCTAGTGTTCTCGATGGTGTATTCCAAAGTTACTGGAGGGGTGGTGGAGACACGTCTATGCTAAACAGGACTAAGAACCTTCTAGAAGAAGCTATCAGCGGTCGCTCAGTAACGTGCCTCATTTGTATAGGATCTATCAAAAGAACAGACGCAATCTGGACTTGCGACCATTGTTTTTCATATCTTCATTTGTCTTGCGTCCAAAAATGGGCGAACGACAGCATCAGCCTACGTAGTGAAGAGAACCATGGTCCAATTGCTGTTGTTAAACCCAAGAAAATTGAATGGTGCTGTCCAAAGTGTCGACATTCGTATTCGAAAGAAGAGATCCCTAGAAAATATCGATGTTTTTGTAGCAAAACGGATGATCCTGAATACCATCCATGGCTCATTCCCCATACATGTGGTGAAGTATGTGAGAAAAGATTATCAACTGGTGCTAATTGTAAGCATAAATGTTTACTTCTCTGCCATCCTGGTCCTTGCCCACCGTGTCCACAAACTGTGAATGGAGTATGTTATTgtgaaaaagaaaggaaaagagTGAGATGTAGTGCAGCCAAGTGGTCTTGTGGCCAACCTTGCAAGAAAACCCTCCTGTGTAAGACacataaatgtgaaaatgaaTGTCATGATGGAAGCTGTGATCCATGCAGCTACACTAGCGTCCAGACTTGCCAATGTAAGTCTGAAAAAGCTAAGAGGCCTTGCAATGATCCATTTTGGCAATGCAAGAAAGTATGCAATAAGCCATATTCATGTGGATACCATAAATGCGAGAAAGTTTGCCACTCAAGTGAGTGCGGTTCTTGCCCAAATTCAGGTATGTCATCGTGCCCGTGCGGAGCAAATGAACGCTTTGTGCAATGTCCTGATGTTATGGAAACCTGCCTTGGTACATGTGGTAAGAAACTCGATAATTGTGAACACTATTGCCCTGAGAAATGTCATAGAGGTCCATGTCCACCATGTCAAAGTTTAATAGAGAAAAAATGTCTATGTTCAACACACACAAGGTCCTTGCCGTGCAGTAAAGAGTTTAAATGTGAAACTAAATGTAGAGGAACCAGAGCTTGTGGTAAACATGGATGTGGACGCAAGTGCTGTAACGGTAACTGCCCACCGTGTGAGAAAATTTGTGACAAACCCCTTCAATGTGGCCGACACAAATGTACTAACATCTGTCATCGTGGTCCGTGCTACCCGTGCCCTCTGGAAGTAAAAGTAACGTGTAGATGTAAAGAGACCTATGTAACAGTTCACTGTGGAAGAGAGAGGCACACAAAACCCCCTAGATGCAATTTGCCTTGCAAAATTAAATACAGGTGTAACCATGTTGAGGAAAATAGACATCGTTGCCATTTCAAGGAATGTCCACCATGCAAAGCAATTTGCGATAAACAGTATCCAAATTGTGGGCATTATTGTGAAGCAGTTTGTCATTTATATGTGGCTGTAGTGTTTAAACAGGTTGAAAAACCTGCAACTCCTTGGGAGGTGCAACCGCCTAAAACTAAAATGATGAGTTTAGAATGCCCGCCTTGCAACACACCTGTCCCAGTAGTATGCTATGGAGAACATGAGACTGTGCAAGATCCATGTCATGCTGCTGTACGAAGATCCTGTGGACGACCATGTGGCCAGCTACTTGCCTGCAGTAATCATAGTTGCTCTTTACAGTGCCATCTTCTCCAACCTAGTCCTGAGTATCCAAATGTTAATTCAAGTTGTAGACAGTGTGACCAAGATTGTTCAGTTCCACGTCCAGAGAAGTGCACTCATAAGTGTCCGAAGGGTGTCTGCCACCCTGGTCCCTGTCCCCCTTGTGAGATACTAGAAAGACTCCCATGTCACTGTGGAGTAACAGAGATATATTTACGTTGTCGTCAAATATCAGTTGCTACGGAAGAAGATTTATCTTGTAAGCAACAGTGTCCGAAGAATTTGGAATGTGGTCACCGTTGCCGTAATAACTGTCATTCAGGGCCTTGCGGGATCCAGATCTGTACCAAAAAAGCTAAAGTTCACTGCCCTTGTGGTAATATCAAAAAAGAAGCCCCATGCAATGCTGTTCGTAGCGGAGAATTTAAAATAGTATGTGATGAAGCTTGTGAAGCAAAGAAGATAGCAGCAAAGATTGAGAGTGAGAAAGAGAAGCAAAGATTGAAAGCTTTGGAGGAAGAAAGGAATAAGAAAGAACTGGCTGAATATGAATGGAAACTGAGTGGTAAGAAGAAGAAGTATAAAGAAAAGAAGGTAGTTGTTAATAAAGATGACCGAGGAATTTTACAGAAGTATTGGATACCAATATTGTCTGTAACTATTGCTATAGTAGGCGTAGCATATTACGTATTTAGTATATAA
Protein Sequence
MARRYRDAAAKLQQNVQKHLEGMKELSSSEEDEPYESSVLDGVFQSYWRGGGDTSMLNRTKNLLEEAISGRSVTCLICIGSIKRTDAIWTCDHCFSYLHLSCVQKWANDSISLRSEENHGPIAVVKPKKIEWCCPKCRHSYSKEEIPRKYRCFCSKTDDPEYHPWLIPHTCGEVCEKRLSTGANCKHKCLLLCHPGPCPPCPQTVNGVCYCEKERKRVRCSAAKWSCGQPCKKTLLCKTHKCENECHDGSCDPCSYTSVQTCQCKSEKAKRPCNDPFWQCKKVCNKPYSCGYHKCEKVCHSSECGSCPNSGMSSCPCGANERFVQCPDVMETCLGTCGKKLDNCEHYCPEKCHRGPCPPCQSLIEKKCLCSTHTRSLPCSKEFKCETKCRGTRACGKHGCGRKCCNGNCPPCEKICDKPLQCGRHKCTNICHRGPCYPCPLEVKVTCRCKETYVTVHCGRERHTKPPRCNLPCKIKYRCNHVEENRHRCHFKECPPCKAICDKQYPNCGHYCEAVCHLYVAVVFKQVEKPATPWEVQPPKTKMMSLECPPCNTPVPVVCYGEHETVQDPCHAAVRRSCGRPCGQLLACSNHSCSLQCHLLQPSPEYPNVNSSCRQCDQDCSVPRPEKCTHKCPKGVCHPGPCPPCEILERLPCHCGVTEIYLRCRQISVATEEDLSCKQQCPKNLECGHRCRNNCHSGPCGIQICTKKAKVHCPCGNIKKEAPCNAVRSGEFKIVCDEACEAKKIAAKIESEKEKQRLKALEEERNKKELAEYEWKLSGKKKKYKEKKVVVNKDDRGILQKYWIPILSVTIAIVGVAYYVFSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_00638337;
80% Identity
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