Lqua003970.1
Basic Information
- Insect
- Lithosia quadra
- Gene Symbol
- pnr
- Assembly
- GCA_963576445.1
- Location
- OY754876.1:16541879-16546984[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-17 3.4e-13 49.4 3.3 1 35 474 507 474 508 0.97 2 2 6.6e-18 2.4e-14 53.1 7.5 1 35 535 568 535 569 0.97
Sequence Information
- Coding Sequence
- ATGGAGCACGTGACGCAAATCGAACAGCGCATTGTAGATACGTCCGCTGAAGCGCTGCAGCTTGTCAAACATGAGGATAGACTGGAGCAGGAGCAAGCAGCTGAGGGGAGCGCAGGCTGTTCACCGCTATCAGGAGGTGGTGAGCAACAGCAGCAGCAGCATCAAGTTGCCGTTTCAATGGCGTCGGATTCATCCCCTGCACCACATTCACAATCCGTGATAACATCGCGCCGAAGTGTACGAACTATCACCGCCGCGGGGCACATTCAAGAAGGTGGTGAGTCGAGTGCTGATGATGGCGTCAAAGACGAGCCTCCTGAGCCAGCGCCACTTGATCATGATCCACAACAACTTCACCAATACGCACCCAAGCTTGAAGATGAACAACGTGAGGCACAACAACATCACTACGATGAAGAACGCTTGCGTCTCGCGGAGGCGGAGACGGCACGGTACCTTGCATTCAAGCAAGAGCCTTACCGTTCACTGGCATCGCCAACACCTGTAGATAAGCGTATGCCACCGCATTATACCCGCGCCCCACAGCGACCTGCCTACGGCCGTGGCCTGGCGCTACGTTACGGCGCCCCTCATCATGTCATCGTGGCCCAAGAAGGTGAGGGCGAGGAAGCTGCGCATGACGCATTTTTAGCACACAAGGAAAAGGAACAGATGCAATATGCCGGTGGTGAAAGTGCTGCTGATTCGCGCCAGTACGCTGCGGTGCTTGCTGAGCAAGCTTCTACTGCGCTCGAGATGATCCAAACCACATCGCTGAATAACCAGCAAGCTGTGGGCGTGGCGTACCAACCAGTGAAATATGAGACGCGTGGTGAAGGAGAGCCACGTCCTAGCACATACGCAAGCCTACAGCCCGTCACCTCCGTGCATGGTGGCTATACCTACGCTGGACAGAGCCCACAGTATGGGGGAGCAGCGGCCTACGGAGCTTATGCGGGTGGAAGCAAGGAGTTACTGACACTGTACAGTGGTGCCCCTGGGAGTGGAGCCGGCAGCGCTGGCGCAGGCGTTGGGGGACGCGGAGATGAGTCACCTCCAGGCCAGCTGTTGTACCGTTCAGATCCCACGCTGTCTTCCTCGTCGTTGACGACAAGGGGCACCCATGTAGTATACGGTTCCGTGGTTCCACAATCGCAAGCTGTATACGAGGCACCTCCTAGTCCTAATTCACAACAGGTGACCCTGTATACACACGGCAATACAGTTCAGTACAAGGTTGGCGGAGAACACTATTTAGGTCAAGGAGGCGGTGTCGAATATGTGCCCGTGTCAGGATACGAAGGCAGTCTCCTCGTAGAAGGGTACCCGGCACCTTCACAGGCGTGGCCCCCACACAATTTGTTACCCATAGACGATGGTTTCGATCCAAGTATGGCAGGCATGGGAGAAGTCAAAGAATGTGTGAACTGTGCGGCGGCGACGACACCACTATGGCGACGCGATGGTACAGGCCACTACCTGTGCAACGCTTGTGGACTCTACACGCGCATCAATGGCGTTAACCGACCACCGCTCAAAGGGCAGAAAACGAAACCACAACAAGCTCTGCCAACCAACGGTAACCGACGCGTAGGAGTGACATGCGCTAATTGCCGTACCTCCAACACGACTCTGTGGCGAAGAAATAACAACGGCGAACCTGTCTGCAATGCATGCGGCCTGTACTACAAGCTGCATAATGTGAACCGGCCGCTGAGCATGAAGAAGGATGGTATTCAGACACGCAAGCGCAAGCCCAAGAGTATGGGTGGTGGGCACAGCGTGCAGCGTCCCGGCGCCGCCCCTCTCTCAGTGGAGGCACACACGCTCAAGGTGCTGCCTCCGCTGTACGCAGCGGTGGAGACGGGCGCGGGGGGCTCATCGCCGCTGCTGTTGCTGCCCGCGAGGCACCAAGCCGATATGGTACCAACGCTAGAGCGCGGTGGCGTGCTGCCGAGCTCGGTGACGCACTACCGGCCGCCGTAA
- Protein Sequence
- MEHVTQIEQRIVDTSAEALQLVKHEDRLEQEQAAEGSAGCSPLSGGGEQQQQQHQVAVSMASDSSPAPHSQSVITSRRSVRTITAAGHIQEGGESSADDGVKDEPPEPAPLDHDPQQLHQYAPKLEDEQREAQQHHYDEERLRLAEAETARYLAFKQEPYRSLASPTPVDKRMPPHYTRAPQRPAYGRGLALRYGAPHHVIVAQEGEGEEAAHDAFLAHKEKEQMQYAGGESAADSRQYAAVLAEQASTALEMIQTTSLNNQQAVGVAYQPVKYETRGEGEPRPSTYASLQPVTSVHGGYTYAGQSPQYGGAAAYGAYAGGSKELLTLYSGAPGSGAGSAGAGVGGRGDESPPGQLLYRSDPTLSSSSLTTRGTHVVYGSVVPQSQAVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGGGVEYVPVSGYEGSLLVEGYPAPSQAWPPHNLLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKTKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHSVQRPGAAPLSVEAHTLKVLPPLYAAVETGAGGSSPLLLLPARHQADMVPTLERGGVLPSSVTHYRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00157713;
- 90% Identity
- iTF_01167272; iTF_00405590; iTF_00637104; iTF_00638320;
- 80% Identity
- -