Lqua003969.1
Basic Information
- Insect
- Lithosia quadra
- Gene Symbol
- GATA-B
- Assembly
- GCA_963576445.1
- Location
- OY754876.1:16514184-16517582[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-18 1.1e-14 54.1 3.9 1 34 11 43 11 45 0.97 2 2 8.9e-19 3.2e-15 55.9 7.6 1 34 80 112 80 114 0.97
Sequence Information
- Coding Sequence
- ATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGGGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACTGGCCACTACCTGTGCAACGCGTGCGGGCTGTACAACAAGATGAACGGCATGAACCGGCCGCTCAAGCAGCCCCGGCGGCTGGTACGTCAGCGCCACGCGCCGCTCGCGCCTGCCGCGCCCCACCACGACATGGGGACGAAGCGGCCAGGCATGTCGTGTACTAACTGCCAGACTACGACTACCTCGCTGTGGCGTAGGAACGCCCATGGTGAGACAGTGTGCAACGCGTGCGGGCTTTATTACAAATTGCACAATATCAACAGACCTCTTGCCATGAAGAAAGACTCTATACAGacGCGGAAGCGAAAACCTAAGAACAGTATAAAGACGGAACGGAATCTCAAAACCGGCCTACAACGGACTCTAGCCTCCGGCGTCAAACTCGAGAATATGTTGGAAAGCAGCAGCGGAGGTGCCGGAGGAGCCGTGGGGGGCGAAGGGCGCTCCCCACTGGCGCTCAACTACTACGTGCAGCAACACGCGCTCAAGCTTGAAGAACCGCCGCCTGCGCACGCGCcgcacgcacacgcacacgcgcacgcacacgcacacacgcacgcgCACGCCGCCGTGTACGACGAGGCCGAGTACCGACGCGCCGCCGACTCGGCCGAGCGCCTCGACCGCCCCACCGTCGTCTCCATGGGCAGCTGA
- Protein Sequence
- MAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAPLAPAAPHHDMGTKRPGMSCTNCQTTTTSLWRRNAHGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSIKTERNLKTGLQRTLASGVKLENMLESSSGGAGGAVGGEGRSPLALNYYVQQHALKLEEPPPAHAPHAHAHAHAHAHTHAHAAVYDEAEYRRAADSAERLDRPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00281937;
- 90% Identity
- iTF_00405588;
- 80% Identity
- -