Basic Information

Insect: Lithosia quadra
Gene Symbol: ZNF526
Assembly: GCA_963576445.1
Location: OY754902.1:3374502-3382289[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.011 0.71 10.9 0.4 1 22 184 205 184 207 0.90

2 10 0.042 2.8 9.1 0.1 1 22 367 388 367 390 0.89

3 10 0.061 4.1 8.6 0.4 1 23 422 445 422 445 0.90

4 10 0.0011 0.076 14.0 2.0 2 23 450 471 449 471 0.97

5 10 0.013 0.87 10.7 1.6 2 23 479 499 479 499 0.97

6 10 8.8e-05 0.0059 17.5 0.5 2 21 506 525 505 530 0.93

7 10 0.0029 0.19 12.7 0.6 1 23 538 561 538 561 0.94

8 10 0.023 1.5 9.9 3.2 1 23 567 590 567 591 0.97

9 10 9.5e-06 0.00064 20.5 1.3 2 23 601 622 600 622 0.97

10 10 0.00012 0.0083 17.0 1.9 2 23 629 651 628 651 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.011	0.71	10.9	0.4	1	22	184	205	184	207	0.90
2	10	0.042	2.8	9.1	0.1	1	22	367	388	367	390	0.89
3	10	0.061	4.1	8.6	0.4	1	23	422	445	422	445	0.90
4	10	0.0011	0.076	14.0	2.0	2	23	450	471	449	471	0.97
5	10	0.013	0.87	10.7	1.6	2	23	479	499	479	499	0.97
6	10	8.8e-05	0.0059	17.5	0.5	2	21	506	525	505	530	0.93
7	10	0.0029	0.19	12.7	0.6	1	23	538	561	538	561	0.94
8	10	0.023	1.5	9.9	3.2	1	23	567	590	567	591	0.97
9	10	9.5e-06	0.00064	20.5	1.3	2	23	601	622	600	622	0.97
10	10	0.00012	0.0083	17.0	1.9	2	23	629	651	628	651	0.94

Sequence Information

Coding Sequence: ATGGATCACACTTACGTGTCGCAGTATCCCTCGGTCCTCGAGACGGGGACAGAGGCACGAGGTAGCAAGTTCGGTCCCGGACCACCAAGTGTTCCCACAGGGCAACATCCCACTATAAGTATAACGCAAAGCATCAAGAACCAACATGATGACGTCACCCAGTTCGTACGAGATAACTTTTGTTTGTATATTGAGGAAAATATTTTGGAAGTGCCAGACGTAGTGTTAGAGCCGGGCGCGAAGGTCATGACACACATCGCGGTCGGAGCGGACGCGTGGGGCTCGCCCACAGTCACCATCGCTACAGGAGAGATGCCGGAGGTGCCTGCAGTTCCTATCCATGCACCGAAATTACAAACAGTAATCAAGAAGGATCAGTCTAACACATCTTTTGTCACCGAGTGCAGGACAGACGCAGATATTTTGGCTTCAAGGGTCAGCAGAGCTCCATGGACAAAGTCTAAGGAGTTATCCGCGCTGTCACCAACTGCAAACAGAGGAAGTAACAGTGGAGAGACGAAAGGTTGCAAGCAATCCATCAGTTCGGCATACAAATGTGAGTTATGTCATATTAATTTCGACACACCACAACAGGTTGAACAGCATTTTGAAGCACCTCATGAGagcATGGATCACATTATACAGTCTCTTTCTGATCTAAACATGGAGACGGAGACGGAAAATGATAGTACGTTTTTTGACTTCACAAATGCTCCTGACGTGCAGCAGTACATTACTGTAGGCACCTCTGAGTACATTGAGCAGGATCTCGATGTGGACAAGGTCATTCAagatattttaagtttagataATGACGATCATATTACCGGAGtaCCAGATGCAGTCGCACAGGCCATGGTTATGTCACACATTGAGGTTGGAACGAAAGCCAAAGAGTTGGCCACTACAGCAGAAATACCACAATTTCTCACGCCGGATCCTCTCCAAGCACCGAGATTGGGAACAGTATTATATTGCCAGGATAAGAAAGATGTAAATGCACCTGAAGTGTATTTAGTCACTGAGTGCATGAGAGACGAGGACATGCTGGACTTAAGACCAGTGGCAGAGGGCTCGGTGTTGGATACCAGCGCCGTATATAAGTGTGAGATGTGTGTGATCGACTTTAGTACACAAAGACAGGTTATAGACCATTTTGAAGCGGTTCATAGAGCGAATGTAAATAAGAAGGACAAAGCATCTTTGCAGAAAGCTGCAACGTGTCTAGAAGTACACCGACGCAGCTTGAGGACCACCGAGGGATACCAGTGTCTGAAGTGTGATCTGTTCTTCGAGAGTCCGAGCGCCCGTGTGGAGCACGCCTACAAGAGTCACCGAGTGGGTTTGCAGTGCGATCTTTGTAAAAAGCGACTTCTTACCAATTATTCGTTGAGGAGACACCTCAGAACACATTCCAACCCAATACCCTACGAAGAATGTCCTGTCTGTCACAAAATGTTGCGAACCGTCCAACTAAAGAGCCACATTCAGCGACACGAGAACAAGACGCGCGTGGAGTGCGTCGACTGCAAGAAGTCATTCTCCCGGCTGTCCGCTTATCGCAGCCACATCAAGTACTCCAGAGTCCACGCGTCTGTTGAAGTGCTCAGATATCCTTGCTCAGTGTGCAATAAAGGTTATCCGACTAAGGAGATGATGCAAGATCACTTTAACTATCGACATCTCGGCAAGACATTGCACAAGTGTCCTATTTGTGAAAAGGCATTGGCGTCACGACAATGCGTCGGTCGTCACCTTAGAAGGGCTCACCACGGAGGCAAGGAGAGTCTACGAGACAAGGTCTGTCAAAAATGCGGGAAGGGTTACAAGGACCAGAAAAGTCTAAAAGAACATGAAAGAACCCACACAGGTGAACGTCCGCTGTGTTGTAATGTGTGTGGCAAGAAGTTCAGACAACGATCTGTGCTTTATGCGCACAAGAGGGGAGTGCACAAGATGATCACCCCGGCCAAGCCCGTGCAGTTTCTTGTACGGAACGCCGGCTCGAGGGACCAAAATGTTTAA
Protein Sequence: MDHTYVSQYPSVLETGTEARGSKFGPGPPSVPTGQHPTISITQSIKNQHDDVTQFVRDNFCLYIEENILEVPDVVLEPGAKVMTHIAVGADAWGSPTVTIATGEMPEVPAVPIHAPKLQTVIKKDQSNTSFVTECRTDADILASRVSRAPWTKSKELSALSPTANRGSNSGETKGCKQSISSAYKCELCHINFDTPQQVEQHFEAPHESMDHIIQSLSDLNMETETENDSTFFDFTNAPDVQQYITVGTSEYIEQDLDVDKVIQDILSLDNDDHITGVPDAVAQAMVMSHIEVGTKAKELATTAEIPQFLTPDPLQAPRLGTVLYCQDKKDVNAPEVYLVTECMRDEDMLDLRPVAEGSVLDTSAVYKCEMCVIDFSTQRQVIDHFEAVHRANVNKKDKASLQKAATCLEVHRRSLRTTEGYQCLKCDLFFESPSARVEHAYKSHRVGLQCDLCKKRLLTNYSLRRHLRTHSNPIPYEECPVCHKMLRTVQLKSHIQRHENKTRVECVDCKKSFSRLSAYRSHIKYSRVHASVEVLRYPCSVCNKGYPTKEMMQDHFNYRHLGKTLHKCPICEKALASRQCVGRHLRRAHHGGKESLRDKVCQKCGKGYKDQKSLKEHERTHTGERPLCCNVCGKKFRQRSVLYAHKRGVHKMITPAKPVQFLVRNAGSRDQNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -