Basic Information

Insect: Lithosia quadra
Gene Symbol: -
Assembly: GCA_963576445.1
Location: OY754901.1:5302466-5329846[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.63 42 5.4 0.7 2 19 489 506 488 510 0.88

2 18 0.011 0.76 10.8 0.2 1 23 520 543 520 543 0.95

3 18 0.067 4.5 8.4 1.9 1 21 668 688 668 689 0.95

4 18 0.045 3 8.9 3.8 2 23 750 771 749 771 0.95

5 18 7.7 5.2e+02 1.9 1.5 1 23 783 807 783 807 0.86

6 18 0.00017 0.011 16.6 0.3 2 23 814 837 813 837 0.97

7 18 0.089 6 8.0 0.2 1 23 843 865 843 865 0.93

8 18 0.0043 0.29 12.2 2.9 1 23 871 893 871 893 0.98

9 18 0.38 25 6.0 0.1 2 20 904 922 904 924 0.90

10 18 0.073 4.9 8.3 0.2 1 23 1003 1025 1003 1025 0.96

11 18 2.6 1.8e+02 3.4 7.2 1 23 1032 1054 1032 1054 0.95

12 18 0.0018 0.12 13.4 1.8 1 23 1096 1119 1096 1119 0.95

13 18 0.00035 0.023 15.6 1.3 1 23 1126 1149 1126 1149 0.98

14 18 0.017 1.2 10.3 0.2 2 23 1171 1193 1170 1193 0.96

15 18 0.0075 0.5 11.4 1.5 3 23 1220 1241 1219 1241 0.95

16 18 0.00039 0.026 15.5 1.2 1 23 1271 1293 1271 1293 0.96

17 18 0.00016 0.01 16.7 0.1 1 23 1299 1321 1299 1321 0.97

18 18 0.00049 0.033 15.1 0.7 3 23 1329 1350 1327 1350 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.63	42	5.4	0.7	2	19	489	506	488	510	0.88
2	18	0.011	0.76	10.8	0.2	1	23	520	543	520	543	0.95
3	18	0.067	4.5	8.4	1.9	1	21	668	688	668	689	0.95
4	18	0.045	3	8.9	3.8	2	23	750	771	749	771	0.95
5	18	7.7	5.2e+02	1.9	1.5	1	23	783	807	783	807	0.86
6	18	0.00017	0.011	16.6	0.3	2	23	814	837	813	837	0.97
7	18	0.089	6	8.0	0.2	1	23	843	865	843	865	0.93
8	18	0.0043	0.29	12.2	2.9	1	23	871	893	871	893	0.98
9	18	0.38	25	6.0	0.1	2	20	904	922	904	924	0.90
10	18	0.073	4.9	8.3	0.2	1	23	1003	1025	1003	1025	0.96
11	18	2.6	1.8e+02	3.4	7.2	1	23	1032	1054	1032	1054	0.95
12	18	0.0018	0.12	13.4	1.8	1	23	1096	1119	1096	1119	0.95
13	18	0.00035	0.023	15.6	1.3	1	23	1126	1149	1126	1149	0.98
14	18	0.017	1.2	10.3	0.2	2	23	1171	1193	1170	1193	0.96
15	18	0.0075	0.5	11.4	1.5	3	23	1220	1241	1219	1241	0.95
16	18	0.00039	0.026	15.5	1.2	1	23	1271	1293	1271	1293	0.96
17	18	0.00016	0.01	16.7	0.1	1	23	1299	1321	1299	1321	0.97
18	18	0.00049	0.033	15.1	0.7	3	23	1329	1350	1327	1350	0.95

Sequence Information

Coding Sequence: ATGTCTGAGCCCACGCCTCCAGTGATCATATGGATGGAGAACGCGACCGGAGAGGATGTAGCGCTAAAAATTGACCCAGAGGACAACTTTCAGACATTCCTCGACAAAGCTAaATCACTATTAGGTTTCGAAGTAGACTTAAATTCCATAACCAAGAATCAACCAGTATCGTTAACTGAAAACGTATACCAGTTCCTAATGAACGCAGAACAGAGTATACAGCCAGAAGGCTTGTCCCAAACGTTGGACCCAATGTTGGGCACTAATGAAGGCGCTGACGCCAACGACTTGGTATACATATTGGACGATGGCACTCAAATCAGGGCATCGCAAATACATTTCGATAATGATGACCCTTTAATCGATTTAACAGCTGAAAAGATACCTTTTGTGAAATATGCTGACGTTACCGATGATATAGACATTGAAAATTTCACTATAGAGGAAACTAAAAAGATTAATATCGTTGAAAGTCCTGTATCAAGATGGTCGAGCAAAAATTCCAGTCCAAAGTGCAGTTTCGTAAATTCTTTACCGTTCAAACTTGTATGTAACAACACTTCTGGATTCGAAGCGCAATTCACTAAATACTTAGAAGCAAATACAGCCAAAACTTACGCGACTTTGAACCCTGTGACTATAAGAAATAAGTCTCCAAAAAGCTTAAtcaaagataattttaaaaactacgaTACCTATCAAAGAAACGACAGTCTTTCGTACACTAGAGAGGACATTCTGAACATGTTTAAAGATTCTCCTATGACGTCATTACCCTATGATCAAGGCTATAGCGAAAGAAGGCATGTTAGGAAAACTGATCCTTCAAGACTGGTACATAAGAATTGGAATAAACCAATGTCTTATGTAGATATAGATGGTGTTCTAATTGGTGAAAGCGAGAgtcaaatatgttttatttgtgGGAAACACGTTGATAATAACGTAGATAAGCTATATCTCTTCGATAATGAAGACCAGAGGGTCCACAGATGCTCACCCCAAAAGAAAATGTCGACGCAACTCAAAATTATATGCGAATCTTGTCTTAACGAGAATTTCAGACCTTGTAGAATGAAAAGTGCTAACCAATTTTTGAATCCAGATGAATTTCTCGTTATAAGAAACAATCAGCAGTATATATTTCAGAAGATTAAGAATTTCAGTTTCACACGTTTTGCTAAGAAGGATACGAAAGATATAAAACAGGATAAGGAAGAATTCGTTAACGTTGAAATCGGTTCTGATGGGGAAATCATCACTAAGCCGATAGACAATGACCTAAGGGACGATGATGTCATCATAGTGAAAGATGATAAAAAGGAGAGTTGTTCGAGTGATGTAGAAATAATTGAGCCGGAACCAGAGATAGATAATTACATAGACAATTTGGAAGAAGCTGATGAAGAGGTAAAAGAGTTTTTAGGGAAATATAGTTGTGACACTAACGAAATTGCTGAACTTAAGTGCAGGTTCTGTGAAAAAGTCTTCGTCGACTTGAGTGAAGCGATGGAGCACTGTGAGGCTCATAAGCATGATTTAGAAGATGGTGAAGTCTTCCCCTGCCCGCTGTGTAATTATGGTTATCCCCATTTAAAATGGCTAAAGGGTCATCTAAAAGCGGCTCACGACAGAAACTCAACTACCGAAGGAGAGAATTTGAAAGAAGAAATCAAAGACGAACCAGATCCAAAGTCCTCTAAAGCGAACTCGCCTATAGCAAACCGGACTCGCAGTTCGAATAGAAAAAGTGACGAAGAAAGGAAAGAAAACGAGGCGTCAGATGAAATAAAGACAGAATCGAACCCCATACCGAGCCAGCAAGAGCCACCCCTCTTAAAAATGGAGGTGAAGCAAGAGGCACTGGACAGCAGTGAGGATGAGATCTGGATAGTGCAGACCGCTGACATGGAGAGCAGCCAGGACCTGGAGAAACTGCTGGTTGGTACCAATAAGGGTACAGATGAAGGGCAGCCAACTGAAGCAGAGAAGAGAAGAGATTTCAAGTGCTTTAATTGCAGTCAAGTATACCCAACTGCTGAGAGCTTATCATCACATCGGTGTAAACGGAGAGGCAGGAAGCGGAAAGTCAAGGATGACAACCTGATATGTATACCTACGGAAGCGGACTTTTTGAAGAGGGCCCAAGGACGTCCCAGACCCAATACAACGGAAGACAATGATTTACTTGTAATTCGTACTCGCAAACGCCGCAACAAGCAAGTGACCTGGAACCCTCAAATAGTGACCTGCCACAACTGTAACGAGTCCTTTACGTCCAAAGTACGCCTGAAGTTCCACATGCAATTCCATGAAAGCACAAACACGATGTTATCAGATGGAAGGTACTTGTGCACGGAGTGTACTGGAACTAACTTCTCCACGGAGACGGAACTCTTCGACCATGTGCACTTCCAGCATGATAAGCAGAAGAGGTGGCAGTGTCCTGTAGAGGGGTGCGGGAAGACCTTCTTCTTGAGGGCAACACTTACGAAACACAGTCGTACACACACAGACACGCGGAGGTATGTGTGTGTGACTTGTGGCAAACGGTTTCTGGATAAACAGACCTTGGATGAGCATGGAGTCACCCATCTCCAGATCAAGCCGTTCCAGTGCCACATCTGCCTCAAGCAGCTGACGCGGCGCTCGCGCCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCGCGCCTCGTGCGCGTGTGCGCCGTCTGCCAGCGTGCCTTCCGGGACGCGCAGCACGCGCAGGAACATGCATCAAAATCTACAGAGTGTATAGAGGCGTTCGCGAATGAGCTGAAGGAGGAGACCGAAGAGATGACGGTACAGCTGTCGCCCACCAGCGGCCTCGTGCGGCACACCGTGCAGATAATTGAGTCCCCAAAGCTATCAAAACCGATCAAACGCCAGGTGACCAACGAAGTGGGAGAGCCGTTACTGTCTCAGCTGGCTGATGAAGCGAGGGCCTTGATAAGAGTCGTGGAGATTGAGAAGGCGTTTAGGTGTGAATACTGCGAAGACGTATTCTACTTGGAGTCCGGTTTGAATAACCATCGTGTGATACACAAGGGGGTGAAGAACCCCTTCACTTGTCATATATGTAAAGTCAGCTTCGCTACGTACTCCAGATGTACAACCCACAAAACGACACACGGCTTTTACAAGCGTTCCCTAGCTGACGCCAAGAAGCAAGCTGATGGGTCGGCCCAGAAGGACACAGGACCGACATCCGCCACCGGTATACTTGGATATGGGGACTTTCCTGTCGTCAAACATTTCTTGTGCGAGGATTGCGGCCGGTCATACCTCCACTGGACATACCTCCAAGTCCACCGCCGTATGAAACACGCCAACGAGAATTTCCTGTACAAGTGCAATCAGTGTGAAATGACTTTCCCTAATAGTTGGAGTTTGTCTTACCATCGGAAGAAAGTGCACGGTAAAACTGGACCTGATGACCCCGGTACAAGCAATAAGACCCCCAGGGAAGATTACAGGATACCATGTCGAGATTGCGAGGAAGTTCTCCCGAACAAAACAGCGTTGTATAAACACAGGAAAAAAGAACACAGCGATGGTAATATGTCTGCCACGCGGACGAATAACTCTCAGgGTACATTCAGCGGCGAGGGGCGGAAATCAAACGCATGCGCACACTGTCCAGCCACATTCACACATGCACCGGACCTACATAAACATGTCAAAGAAGTACACAAAGTGGAGGCGGAATCATCGTGCGGTTCGTGTAGCAGCAAGTCTTTCGGTGCGGCCGGAGCGCATTCCGCGTGCGCGCGTCGTCCGCACGCCTGCCCCGTGTGCGGACACGCCTTCCGCACGCTGTCCATGCGCAACGAGCACCTGCGCGTGCACACCGGCGAGCGGCCCTTCCCCTGCGACGTGTGCGGGGTCGCCTTCCGCAGgTCGACAGCGATGCGCAACCATCGCCTTATCCACAGTGGAGTGCGAGCGTGGGCCTGCGGGCGATGTCCGAAGCGGTTCAGGATTCGATCCGATCTGCGCACGCACTTGCGGCTTAAACATCCCGCTACTTTACTCGTGTTTGAGATGGAAGGTCTCAATCCATCGCCTGATGAAGTAATGAAACACCTAGCGATGCACAATATCTCTCACGACAAAGTCATCGAAATCACTAAGATATCATTCGCTAAGGGCACGTCGAGTGTGATACCGAACAGTGGTCGCGCGCTGGCGACGTTGGGAGACGTTCCTCGCTCACACGTCATATGCAGTAAACCGCCGCCGCCGGTCAACTtgGATGAATTCCAGCCTGCACGCCGCGGGAGAGGCATAGCAAAGAATCCACGCCGTCCCAAGATATTGCAACGCGGCATGTGTTCACAGGACTCCTCTGCTTACCCACTAGCTGTCAACGTTGGAGGGGAGGAAATACCAGAGCTGAACCTTCAGCTGTTACTGCGGGATGGGGTCCTAGTCAACGGCAACCAGATGGTTCAACTTCAACTGGACGATCCCATGTTGCTGGAGTAA
Protein Sequence: MSEPTPPVIIWMENATGEDVALKIDPEDNFQTFLDKAKSLLGFEVDLNSITKNQPVSLTENVYQFLMNAEQSIQPEGLSQTLDPMLGTNEGADANDLVYILDDGTQIRASQIHFDNDDPLIDLTAEKIPFVKYADVTDDIDIENFTIEETKKINIVESPVSRWSSKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANTAKTYATLNPVTIRNKSPKSLIKDNFKNYDTYQRNDSLSYTREDILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKNWNKPMSYVDIDGVLIGESESQICFICGKHVDNNVDKLYLFDNEDQRVHRCSPQKKMSTQLKIICESCLNENFRPCRMKSANQFLNPDEFLVIRNNQQYIFQKIKNFSFTRFAKKDTKDIKQDKEEFVNVEIGSDGEIITKPIDNDLRDDDVIIVKDDKKESCSSDVEIIEPEPEIDNYIDNLEEADEEVKEFLGKYSCDTNEIAELKCRFCEKVFVDLSEAMEHCEAHKHDLEDGEVFPCPLCNYGYPHLKWLKGHLKAAHDRNSTTEGENLKEEIKDEPDPKSSKANSPIANRTRSSNRKSDEERKENEASDEIKTESNPIPSQQEPPLLKMEVKQEALDSSEDEIWIVQTADMESSQDLEKLLVGTNKGTDEGQPTEAEKRRDFKCFNCSQVYPTAESLSSHRCKRRGRKRKVKDDNLICIPTEADFLKRAQGRPRPNTTEDNDLLVIRTRKRRNKQVTWNPQIVTCHNCNESFTSKVRLKFHMQFHESTNTMLSDGRYLCTECTGTNFSTETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCQRAFRDAQHAQEHASKSTECIEAFANELKEETEEMTVQLSPTSGLVRHTVQIIESPKLSKPIKRQVTNEVGEPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNNHRVIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADGSAQKDTGPTSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCEMTFPNSWSLSYHRKKVHGKTGPDDPGTSNKTPREDYRIPCRDCEEVLPNKTALYKHRKKEHSDGNMSATRTNNSQGTFSGEGRKSNACAHCPATFTHAPDLHKHVKEVHKVEAESSCGSCSSKSFGAAGAHSACARRPHACPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHSGVRAWACGRCPKRFRIRSDLRTHLRLKHPATLLVFEMEGLNPSPDEVMKHLAMHNISHDKVIEITKISFAKGTSSVIPNSGRALATLGDVPRSHVICSKPPPPVNLDEFQPARRGRGIAKNPRRPKILQRGMCSQDSSAYPLAVNVGGEEIPELNLQLLLRDGVLVNGNQMVQLQLDDPMLLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01502366;
90% Identity: -
80% Identity: -