Basic Information

Insect: Lithosia quadra
Gene Symbol: ZNF296
Assembly: GCA_963576445.1
Location: OY754897.1:7586540-7606578[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.24 16 6.7 0.2 3 23 112 132 110 132 0.96

2 14 0.0021 0.14 13.1 2.8 1 23 282 304 282 304 0.99

3 14 2.2e-05 0.0015 19.4 0.5 1 23 310 333 310 333 0.97

4 14 0.0031 0.21 12.6 2.4 1 23 338 361 338 361 0.94

5 14 0.00014 0.0093 16.9 0.9 3 23 526 546 525 546 0.98

6 14 2.7e-05 0.0018 19.1 1.4 1 23 552 574 552 574 0.98

7 14 1.8 1.2e+02 3.9 0.5 1 23 662 684 662 684 0.95

8 14 0.16 11 7.2 5.1 1 23 690 712 690 712 0.95

9 14 0.00077 0.052 14.5 0.9 1 23 718 740 718 740 0.98

10 14 0.00064 0.043 14.8 2.1 1 23 749 771 749 771 0.98

11 14 0.00069 0.047 14.7 3.0 3 23 819 839 818 839 0.97

12 14 0.017 1.1 10.3 5.3 1 23 856 878 856 878 0.96

13 14 1.7e-06 0.00012 22.8 1.0 1 23 884 906 884 906 0.98

14 14 1.9e-07 1.3e-05 25.8 3.1 1 23 912 935 912 935 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.24	16	6.7	0.2	3	23	112	132	110	132	0.96
2	14	0.0021	0.14	13.1	2.8	1	23	282	304	282	304	0.99
3	14	2.2e-05	0.0015	19.4	0.5	1	23	310	333	310	333	0.97
4	14	0.0031	0.21	12.6	2.4	1	23	338	361	338	361	0.94
5	14	0.00014	0.0093	16.9	0.9	3	23	526	546	525	546	0.98
6	14	2.7e-05	0.0018	19.1	1.4	1	23	552	574	552	574	0.98
7	14	1.8	1.2e+02	3.9	0.5	1	23	662	684	662	684	0.95
8	14	0.16	11	7.2	5.1	1	23	690	712	690	712	0.95
9	14	0.00077	0.052	14.5	0.9	1	23	718	740	718	740	0.98
10	14	0.00064	0.043	14.8	2.1	1	23	749	771	749	771	0.98
11	14	0.00069	0.047	14.7	3.0	3	23	819	839	818	839	0.97
12	14	0.017	1.1	10.3	5.3	1	23	856	878	856	878	0.96
13	14	1.7e-06	0.00012	22.8	1.0	1	23	884	906	884	906	0.98
14	14	1.9e-07	1.3e-05	25.8	3.1	1	23	912	935	912	935	0.98

Sequence Information

Coding Sequence: ATGAATCATAGTATGGATTTGGACCCTCTCAGTACTTACGAGTACCCCTCATTCGATAGTTACCATTCTATAAACACCCTTCAGCAATTTCCTTACCAACATGTCAAGCAAGAACAATCGTACTATCACCAAACGATTCAGAACAGTACAGAATATATCAACAATATACCACAAATCATCCCGGAAAGTCAACCTGTACCAGAAACAGCTAAAGTAGAAACCACACCTGATCAAAATGAAGTCAACTCTAGCACTAAAAAGAAGAAAGATAAAAAGAACGGAAAGAATTTTTGTTCGGAGAAGATTAATGATCAATCTTATCCATTTTATGGTTGTTCGGTATGTAATATTAGCTACACAGCATTACATGAGCTGGACCAACATGTGACTGTACACAAAAATAGAATGACGAGTTACAGATTAAGGTTAAGGAATCAATATAAgaagaaacaaattaaaaaagaaaagaaaaaattgaaaaagatGAAGAAAATTAAGCAGGAAATGGACCACGATGTAGAAATTAAACCTGAAGACGGTTATATAGGGAGCGAGATAGCTACTGACTATGTCAACGGTGAAAATGGAACGAGTGCAGAAACAGATGTCAATGGTGACAACGGAACAAGTATAGGAATGGATTTCAACAACGATAATGGAATAAGTATAGTAAAGAATGCCCAAAGTGATAACAGGCAGAGTATAGGTTTGGAGAACAAAGAAATTGAATcaaataattctaataataacTTAACAAATGGTAAATGTATGGAGACTAACGAAGAAAATTGTATGAATGATAAAGATATGAATGAAGCTGAATTGAATAATCTTGAGAAAATTTACAAATGTTTTGCGTGTCAGAAACAGTTCACGTTGAGTTATTACTTGAAGTTGCACGTTAGATCTCACACAGatgaAAAGCCTTACACATGCAATGTGTGCGGCCAATCATTTATAACGGCGAGCAAACTCGGGAGGCACAACAAGCGGATACACCTCGCAACGAGGTTCCAGTGTCGGATATGTTTTAAGATATTTTCTAGATTCGAGTTATTAACAAGTCACTTTGATAAGAGTCACCCGGAGGACAAATTGGAAGGAGAGCCTTATGATTACAACGCCATTCTGCCATACCTGAAGGAGCTAGAGGAACAGCTCAAGGAACAGACGGAGGTGAAAGACCAGAAGAAGGAAGACGTGTGGTTGGACTGCGGAGCGCCGGCGCCCCCCGCAGCCGACGACGTCAAGGAAGAGaaccaAGGCGAAGAACAAAACTTTACATCTAAGATGGACGTATGTCTAGAAGAGGTTAAGGTGCCTTGTCTAGAGGTAGACGTCAAGGTGAAGCAGGAGACAGAGgatggggagggggaggggggcagCAAGACTGTGGATGTCGAGCTGCCGGGAGACGACTTcaggaatgatgatgatgatgttaagGACTTCAAGGATGATAGCTTCTCGGACGAGGACTACTTCCCGTCCAACACGTGGGCGGCGACGCCGAAGTGCGAGCCGTCCCCGCCGCCGTCCCCGCGGCGCCGCAAGGCCCCGGCGGCGGGGCGGGCGTGCGGCGTGTGCCACAAGACGATCAGCTCGGCGTCCTACATGCGCGTACACATGCGCACGCACACGGGCGAGCGCCCCTTCAAGTGCTACACGTGCGGCCGCGGGTTCATCACCAGCAGCAAGATGAACCGACACGTGCTCACCCATGGGCTCGACGCCAAGCAAGAAGATATCAAGCAGGAGAACGCAGAAGTGAAAGAAGAAGATGACATTCCCACAGAGGAAGAGACCACCAATTCTactaagaagaaaaagaaggtaAAGCGCAAGCTAGCAGAGAAGGGAGAAGAGAAAGTCAGGAAGAAACACCAGAAGAGACCGCACTCGTGTGAATATTGTAACCAGAAGTTCCTACACCTAAACATGTTGGAGGTCCACAAGAAGTGCCACGAGGGCGAAGCGCTAGTGTTCCGCTGTCACTTCTGCTTAGAGGAGGCCATCGACGAGACGACCCTCAAGGAGCACGAGGCCTCGCACGGAGGGCCCAAGCCCTACCTTTGTACTATCTGCAGGAAAACCTACAAGAAGCGAGAGACTATGGTGTACCACCGCAAGCACCACCAGCCCGAGAAGGAGTACATCTGCGACATCTGCTCCAAGCGGTTCAACGCGGCCTGCAAGCTGGCCAAGCACCTAGCCACGCACCGCCGGGACCAGTTCGTGCTGCGCTACGAGTGCCCCGTCTGCGCGCACATGTTCAACACCAAGTACCACGTGCAGATGCACCTGGCCACGCACCAGAAGGAGGGCCTGATCCTGGAGTCGAACCGCAACGAGGTGTTGGCGATGGTGCTGCAAAACGCGCTGAAGATCCCCAAGCAGTCCGACGCAGCCTCCAACCTCACAGACATCACGCCCTCCGATGAAAGGTACAGAATTTGCAAGATCTGCGGTGAGACATTCCATCACTTCTACTACCTCGAGGAGCACCTCAAAAGCCACGGCTCCAAAATAGCCATCGACGACACCGCCAAGGccgaagaaaaaaaatatatctgcgAAATCTGTCACAAGGGTTTCAAACTACACTATTATTTAAAGTTACACAGCTTCACACACTCAAAAGAGAAGCCCTTCATGTGCCAGCAGTGTGGAAAGGGCTTTATAACAAAGGGCAAGTTGAAAAGACATTTAGAGACTCATTCCGGTTTGAAAAAATACCAATGTCATATATGTTATAAGTTTTTCACTCGACCAAGCTATCTAAGAATTCATATTAGAACAATTCACGGTACTCAGGATTATAACTATAGGTTTGATAAATCGTGTATGTCGCTTACGGCCATTTCTGCGCTTACGCAGATGTCCGACAGTCAGACTAGCGTTTAA
Protein Sequence: MNHSMDLDPLSTYEYPSFDSYHSINTLQQFPYQHVKQEQSYYHQTIQNSTEYINNIPQIIPESQPVPETAKVETTPDQNEVNSSTKKKKDKKNGKNFCSEKINDQSYPFYGCSVCNISYTALHELDQHVTVHKNRMTSYRLRLRNQYKKKQIKKEKKKLKKMKKIKQEMDHDVEIKPEDGYIGSEIATDYVNGENGTSAETDVNGDNGTSIGMDFNNDNGISIVKNAQSDNRQSIGLENKEIESNNSNNNLTNGKCMETNEENCMNDKDMNEAELNNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCNVCGQSFITASKLGRHNKRIHLATRFQCRICFKIFSRFELLTSHFDKSHPEDKLEGEPYDYNAILPYLKELEEQLKEQTEVKDQKKEDVWLDCGAPAPPAADDVKEENQGEEQNFTSKMDVCLEEVKVPCLEVDVKVKQETEDGEGEGGSKTVDVELPGDDFRNDDDDVKDFKDDSFSDEDYFPSNTWAATPKCEPSPPPSPRRRKAPAAGRACGVCHKTISSASYMRVHMRTHTGERPFKCYTCGRGFITSSKMNRHVLTHGLDAKQEDIKQENAEVKEEDDIPTEEETTNSTKKKKKVKRKLAEKGEEKVRKKHQKRPHSCEYCNQKFLHLNMLEVHKKCHEGEALVFRCHFCLEEAIDETTLKEHEASHGGPKPYLCTICRKTYKKRETMVYHRKHHQPEKEYICDICSKRFNAACKLAKHLATHRRDQFVLRYECPVCAHMFNTKYHVQMHLATHQKEGLILESNRNEVLAMVLQNALKIPKQSDAASNLTDITPSDERYRICKICGETFHHFYYLEEHLKSHGSKIAIDDTAKAEEKKYICEICHKGFKLHYYLKLHSFTHSKEKPFMCQQCGKGFITKGKLKRHLETHSGLKKYQCHICYKFFTRPSYLRIHIRTIHGTQDYNYRFDKSCMSLTAISALTQMSDSQTSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00636764;
90% Identity: -
80% Identity: -