Lqua009429.1
Basic Information
- Insect
- Lithosia quadra
- Gene Symbol
- X-element\ORF2
- Assembly
- GCA_963576445.1
- Location
- OY754883.1:14289782-14305676[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-22 1.1e-17 64.3 0.2 29 83 173 227 159 250 0.83 2 2 0.22 5.5e+03 -2.4 0.3 55 63 464 472 449 485 0.72
Sequence Information
- Coding Sequence
- ATGTCGACGGAACAGACCACTCAAGCACCACCAGCGGCACAGTTGAAGATCAAAGACACGGCCGACAGTGGGGAGAGTAGCCTATCGAGCATCACAGTGGCTTCGCGGATTCCAGAATTCTGGGCAGACCAAACGCGACTCTGGTTTGTCCAGTTCGAGGCCGCCGTGGAAGGACAGCGCCTTAGTGAAACACGGAAATTACAGAGGTTAATCGGAGAGATGGAGCTGGGAGATCAGCGGCCATCACAACTGCTACGGCGGATGCGGGACCTAGCGGGCGGAAAAGTACCGGATGATACGCTGAGTATGATGTGGCAGGCACACCTGCCTACAGCAGTGAGAGCCATTCTCACCGTCACGGACGCCAAGGACTTGGATACGAGCGCAACTATCGCAGACAAAGTCCTGGAGAGTACGGGTACTTCAGCGCAGATATCGGAAATAAAGCCAGCGGACCCCGGGCGATCGTCAGAAACGGCAGAATTGCAAGAAATAAGAGCGGAAATAGCTCGAATAAACACGCGACTCCGGCCTAAAAGCGGCTCAATGCTCCTGTATAGCCGCAAGAAGGTCCGTTACCGGCGGGACGGCTACTGTTGGAAGAAGAGAAAGGACGGGAAGACCACCAGAGAAGACCATATGAAACTCAAAGTTCAAGGAACGGAGAGTGAGATTACTGCTGCAGTTTTCTCTAGCGTCTATAACATGGGGTTCtacaagaagggtattagaacgTTTTTACAAGGTCGACAACATGAGTTCGACGCCCCTCGTATTTCACACGtgcataggccaagACGAAAGGTCCATCGTATTACAGACACCATTAGTCGTACCTTGGAGTCCAAACAATTCTGCTCTGCAGTATTTCTAGATATCAGCCAAGCCTTCGACAGAGTGTGGCATGATGGGCTCCTGTTCAAAATCAAACAGCTGCTTCCCCATTCTTTTCTACCAATATTGAGATCATACCTCCACGAAAGATGCTTTGAGGTAAAATTTAATGGCGAGACTGCTCCCTTAAAAGAGATTCTCTCAGGGGTTCCCCAGGGTAGCATTTTGGGCCCTGTTCTGTACCTCCTGTATACTGCCGACCTACCAACACACAGTGATACAATAACTGCAACATACGCAGACGACACAGCCATACTATCGGTCCATAAAAACCCAGTAATTGCGTCAGAGAAACTACAGAGCCACATTTACAAAATAGAGGAATGGCTCAACAAATGGCGCATTAAGGCAAATCAAGGCAAATCTATTCATGTCACCTTCACCCTCAGAAAACCGACTTGCCCCAATATAAAACTATACAATGAAGACATTCCACAGGCTGAGGATGCTAAATATCTAGGAATGCATCTGGATCGACGGCTTACCTGGAGAAAACATATCTGGACCAAACGCAAGCAATTGGATACAAAGGTTAGAGCAATGTACTGGTTGATCGGGCGCAAGTCAAGTCTATCACCAGAGAGCAAAATTGCAATATATAAGACCATACTGAAACCGATATGGACTTACGGCATTCAGTTATGGGGAACTTCTAGTATTAGTAACATAGAAATACTTGAAAGATTCCAAAGCAAAACACTAAGAGCCATGCTAAATATACCCTACTATGTGAGCAACAAGTACATACACAAGGATCTAAACATCGGCACAGTCAAACAGGAGATCTCTAGGCACAGTGAGAGCTATCTAGCTAGAATATCGACACACGTTAATCCGCTGGCTTCAAAACTCCAGGGTACAGGAAGTGTATCACACGACCGATTGCGACGGCATGATGTCCCTACGCTAATTGCCAGATTTAATTAA
- Protein Sequence
- MSTEQTTQAPPAAQLKIKDTADSGESSLSSITVASRIPEFWADQTRLWFVQFEAAVEGQRLSETRKLQRLIGEMELGDQRPSQLLRRMRDLAGGKVPDDTLSMMWQAHLPTAVRAILTVTDAKDLDTSATIADKVLESTGTSAQISEIKPADPGRSSETAELQEIRAEIARINTRLRPKSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTESEITAAVFSSVYNMGFYKKGIRTFLQGRQHEFDAPRISHVHRPRRKVHRITDTISRTLESKQFCSAVFLDISQAFDRVWHDGLLFKIKQLLPHSFLPILRSYLHERCFEVKFNGETAPLKEILSGVPQGSILGPVLYLLYTADLPTHSDTITATYADDTAILSVHKNPVIASEKLQSHIYKIEEWLNKWRIKANQGKSIHVTFTLRKPTCPNIKLYNEDIPQAEDAKYLGMHLDRRLTWRKHIWTKRKQLDTKVRAMYWLIGRKSSLSPESKIAIYKTILKPIWTYGIQLWGTSSISNIEILERFQSKTLRAMLNIPYYVSNKYIHKDLNIGTVKQEISRHSESYLARISTHVNPLASKLQGTGSVSHDRLRRHDVPTLIARFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -