Lqua018347.1
Basic Information
- Insect
- Lithosia quadra
- Gene Symbol
- -
- Assembly
- GCA_963576445.1
- Location
- OY754895.1:3351634-3354153[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.1 3e+03 -1.1 0.0 22 33 285 297 282 301 0.79 2 5 2.3e-09 2.3e-06 28.1 0.2 1 45 316 362 316 363 0.94 3 5 2.4e-06 0.0024 18.4 0.1 2 44 370 416 369 418 0.95 4 5 1.3e-09 1.3e-06 28.9 0.0 1 43 422 464 422 466 0.97 5 5 7.6e-05 0.075 13.7 0.0 3 45 474 518 472 519 0.94
Sequence Information
- Coding Sequence
- ATGGCCTGGCAAGCGCAAATAGTATACGATAGTGACActgacaatgatgatgatgagaacgAGATAAGACAGCTCGATGCAGTGCTAGAGGAAGCTGATATTGAAATTTGTGATACCGGTGTACCCAAATCTCCGAGATGGGGCTACTCCAGTCCTTCTCTGGCCTCGCCGCGTCCCGGAGTTTCGTCGTACTCTTCCTTTGTATTAGAAAACTCGGCTCCATCACAAGCTACTGCGATCAATTCAGTTGAAAATTCAGGTTGGTGTAACTCGGATTCTCCCTCACAGACTACATCTTCAACACACACCGCGAATCTATCGCTTTCTAACCCAAAACTACAGGAACTATGTGATTTAGACTCTTTATTGGCCCTTAACAAAATGTACGAAGAAAAATTACGAAGTCTAGAAAGGATATTAGGAGTACGTCTAAAAGAATGCCGCGCTAAACTTGAAGAGATCCAAAAGAGTAGTTTATGTCCTGATAAAATTGAAATCTTTCGTTACATCAATTGTGGCAGGCCTTACTTCAGAGACCAACACAACTCTCCTGCACCGGATAATGAAGACACTATCATGGCAAAAGCTCAGATGTATGATTTCTCTTTAGTTACATCCGTACCAGGATGGACAGTTAGAGATAAAAGTCATTTTACCAATGTGATGACACAAGTATCACTGGATGTTAGAAAAGAAGATTTTAACAATGAAATTAGGAAGTTAAAAAATTCCACTCCACGTAACAAAAAGAAGCAGATGGAAAAGGAAATCAGCAAGCTTAAAAAACAACGGGATAGCTTGAGTTTAAAAATGCCCTTTGCTCAGTTAGCCCTTCCTTTAGATCAGGAATATGACTGGGACTCCTTGGCTAACAAGTTGAACAAAAGACATACACCCCATGAATACAGGTGCCTCTGGAAGTTATACTTTCATCCTTCAATAAACAAAACTAATTGGAATAACGCTGAACACAACACTTTACAGCGACTTGCTATTGAACACCATTATCAAGATTGGGATGACATCGCTAAAAAACTTGACACAGGTAGAACTGGCTATCAATGCTTTGTATATTATCGAACGAATATGACTAATAGTTGTATAGGAAAAAAATGGACTCATGAGGAAGTTACATATCTAAGGAgattgattgattattttaGGGAAGATGTTTATATTCCATGGGGGAAAATTGCTGCAGCAATGGAAAACAGAACTAAAATTCAAATCTACAATAAATATTTGCGTCTTATTGAACAAAGAAAAGGCAGGTTTTTACCTGAAGAGGACTCTGTTATCCTTAACTGTGTGCTAAGATTTGGACCTAACTTTAAGAGAATCACTGAGTATCTTAGTCATAGGTCCATGGTTCAAATACGTGCAAGATATCAAGTGCTCAATAAAATGAGGATTTCAACTGTCTGGTCAGCTGAAGATGACAAGAAACTTGTAGAGATTATGAGTAACCAGGACTCAAATATGACTTTTTCAGCggcaacaaaatattttcccGGAAAAAACAGAATAAATATAAGGTCCAGATATATGACTTTGATAAAATGGATGAAAAGACATCCTAACTCAGATCTTGAATATGCACCAAGACGGGGTGCACGACGTCTGAATCATGGCAAAGCTAGTGAAAACTTGAATCAAgctattgaaaatttaaaaaatattttgaatactgAAGTTTCTGTGAAAAGAGAAAGCAAGAAAATCACTATAGAATCAGATGAACTCAATCTTGATGATGCTTTAGGTGCGATTGTTGTTAATCAATTGGTTAAACATTTCGATCAAAAGAAAGCTGCCGAGTATGCTGTATTGCCGTCTTGCGAAATTGTAATGTCTAGTAAAGAATTGGATATAACAAACTTGCTAAAGTGTCTCATATTTATGAATTCACGATTAAATGAGcacttgtataaaaaatctcaTTATAGAACTGAACACCCCCAAATAAGTGAGGTGAATGACGTTTGTTTAGTAAGGGTAAAGTCTTATTCTAGGAAGAGTACAGTGAAAAtgattaatatgaaaaataGCCCTGATATATGGGGGAATAATGCTTTAAATTCACGAACCCATGTCTTTCCCCCTCACTATTCAACTCTTACAGGGTGCAAAGCTTTGATGTCGCATGTAAGCTCTTAtagtatgtattttaattctaTCAACCTACATATTCTTGTACGAAGGAATTTTCTGTTAAAGAACCTCATGGAGCAGCTACTGGAACGCTTCTATGTATTGTTTCTTTGGCCTATGTTACTCTCTAATGAAGACCCTAATGAAATGAACGGTCAAAAATTAAGTAGAAGTGTTTCAGTATTCATCAGGCCACGTGAACTACCACCAACTCCAgaagttacaataaaatttaataattggaGAAAGTATAGTAATTGTGGTAATTCTGAAGTAATAGATTTGGCTGAGGAACAAGGAAGAGTGGAAGAAATCACTGTACCCAACGTTTTGACTAATAACAATGAGATCTCATCATGGAAATGGTGA
- Protein Sequence
- MAWQAQIVYDSDTDNDDDENEIRQLDAVLEEADIEICDTGVPKSPRWGYSSPSLASPRPGVSSYSSFVLENSAPSQATAINSVENSGWCNSDSPSQTTSSTHTANLSLSNPKLQELCDLDSLLALNKMYEEKLRSLERILGVRLKECRAKLEEIQKSSLCPDKIEIFRYINCGRPYFRDQHNSPAPDNEDTIMAKAQMYDFSLVTSVPGWTVRDKSHFTNVMTQVSLDVRKEDFNNEIRKLKNSTPRNKKKQMEKEISKLKKQRDSLSLKMPFAQLALPLDQEYDWDSLANKLNKRHTPHEYRCLWKLYFHPSINKTNWNNAEHNTLQRLAIEHHYQDWDDIAKKLDTGRTGYQCFVYYRTNMTNSCIGKKWTHEEVTYLRRLIDYFREDVYIPWGKIAAAMENRTKIQIYNKYLRLIEQRKGRFLPEEDSVILNCVLRFGPNFKRITEYLSHRSMVQIRARYQVLNKMRISTVWSAEDDKKLVEIMSNQDSNMTFSAATKYFPGKNRINIRSRYMTLIKWMKRHPNSDLEYAPRRGARRLNHGKASENLNQAIENLKNILNTEVSVKRESKKITIESDELNLDDALGAIVVNQLVKHFDQKKAAEYAVLPSCEIVMSSKELDITNLLKCLIFMNSRLNEHLYKKSHYRTEHPQISEVNDVCLVRVKSYSRKSTVKMINMKNSPDIWGNNALNSRTHVFPPHYSTLTGCKALMSHVSSYSMYFNSINLHILVRRNFLLKNLMEQLLERFYVLFLWPMLLSNEDPNEMNGQKLSRSVSVFIRPRELPPTPEVTIKFNNWRKYSNCGNSEVIDLAEEQGRVEEITVPNVLTNNNEISSWKW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00404860;
- 90% Identity
- -
- 80% Identity
- -