Basic Information

Insect: Lithophane semibrunnea
Gene Symbol: -
Assembly: GCA_947363905.1
Location: OX376214.1:6073195-6091416[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.39 29 5.9 0.8 1 23 236 258 236 258 0.94

2 31 0.0052 0.39 11.7 0.4 2 23 330 352 329 352 0.94

3 31 0.0074 0.55 11.3 1.7 2 23 358 380 357 380 0.94

4 31 0.014 1 10.4 0.8 1 23 385 408 385 408 0.96

5 31 0.35 26 6.0 0.1 2 23 411 433 410 433 0.94

6 31 0.094 7 7.8 2.2 2 21 440 459 439 460 0.93

7 31 0.014 1 10.4 0.3 1 23 519 542 519 542 0.91

8 31 0.049 3.7 8.7 0.2 3 23 571 592 569 592 0.92

9 31 0.023 1.7 9.7 0.4 2 23 615 638 614 638 0.95

10 31 0.001 0.077 13.9 0.6 3 20 645 662 643 666 0.90

11 31 0.72 53 5.0 0.3 1 23 671 694 671 694 0.96

12 31 0.00019 0.014 16.3 0.2 2 23 700 722 700 722 0.96

13 31 0.00013 0.0094 16.8 4.8 1 23 726 749 726 749 0.97

14 31 0.0048 0.36 11.8 0.9 2 23 756 777 755 777 0.96

15 31 0.18 13 6.9 1.2 1 23 783 806 783 806 0.91

16 31 0.009 0.67 11.0 0.0 1 21 857 877 857 878 0.93

17 31 0.0034 0.25 12.3 3.2 1 23 913 935 913 935 0.96

18 31 0.045 3.4 8.8 0.1 3 23 964 985 964 985 0.96

19 31 0.0059 0.44 11.6 0.8 1 23 1005 1028 1005 1028 0.96

20 31 4.7e-05 0.0035 18.2 0.5 1 23 1033 1056 1033 1056 0.96

21 31 0.0014 0.11 13.5 1.0 1 23 1061 1084 1061 1084 0.96

22 31 0.00095 0.07 14.1 1.1 3 23 1088 1109 1087 1109 0.95

23 31 0.014 1 10.4 1.4 2 21 1117 1136 1116 1137 0.94

24 31 0.011 0.86 10.7 3.3 1 23 1192 1215 1192 1215 0.94

25 31 1.1 81 4.4 0.0 2 23 1288 1311 1287 1311 0.94

26 31 2.2e-05 0.0017 19.2 0.1 3 23 1318 1339 1317 1339 0.94

27 31 0.0039 0.29 12.1 2.8 2 23 1344 1366 1343 1366 0.94

28 31 0.012 0.93 10.5 5.1 1 23 1371 1394 1371 1394 0.96

29 31 2.7e-05 0.002 18.9 5.0 1 23 1398 1421 1398 1421 0.97

30 31 0.00032 0.024 15.6 0.3 2 23 1428 1449 1427 1449 0.96

31 31 1.1e-05 0.00084 20.1 0.6 1 23 1455 1477 1455 1477 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.39	29	5.9	0.8	1	23	236	258	236	258	0.94
2	31	0.0052	0.39	11.7	0.4	2	23	330	352	329	352	0.94
3	31	0.0074	0.55	11.3	1.7	2	23	358	380	357	380	0.94
4	31	0.014	1	10.4	0.8	1	23	385	408	385	408	0.96
5	31	0.35	26	6.0	0.1	2	23	411	433	410	433	0.94
6	31	0.094	7	7.8	2.2	2	21	440	459	439	460	0.93
7	31	0.014	1	10.4	0.3	1	23	519	542	519	542	0.91
8	31	0.049	3.7	8.7	0.2	3	23	571	592	569	592	0.92
9	31	0.023	1.7	9.7	0.4	2	23	615	638	614	638	0.95
10	31	0.001	0.077	13.9	0.6	3	20	645	662	643	666	0.90
11	31	0.72	53	5.0	0.3	1	23	671	694	671	694	0.96
12	31	0.00019	0.014	16.3	0.2	2	23	700	722	700	722	0.96
13	31	0.00013	0.0094	16.8	4.8	1	23	726	749	726	749	0.97
14	31	0.0048	0.36	11.8	0.9	2	23	756	777	755	777	0.96
15	31	0.18	13	6.9	1.2	1	23	783	806	783	806	0.91
16	31	0.009	0.67	11.0	0.0	1	21	857	877	857	878	0.93
17	31	0.0034	0.25	12.3	3.2	1	23	913	935	913	935	0.96
18	31	0.045	3.4	8.8	0.1	3	23	964	985	964	985	0.96
19	31	0.0059	0.44	11.6	0.8	1	23	1005	1028	1005	1028	0.96
20	31	4.7e-05	0.0035	18.2	0.5	1	23	1033	1056	1033	1056	0.96
21	31	0.0014	0.11	13.5	1.0	1	23	1061	1084	1061	1084	0.96
22	31	0.00095	0.07	14.1	1.1	3	23	1088	1109	1087	1109	0.95
23	31	0.014	1	10.4	1.4	2	21	1117	1136	1116	1137	0.94
24	31	0.011	0.86	10.7	3.3	1	23	1192	1215	1192	1215	0.94
25	31	1.1	81	4.4	0.0	2	23	1288	1311	1287	1311	0.94
26	31	2.2e-05	0.0017	19.2	0.1	3	23	1318	1339	1317	1339	0.94
27	31	0.0039	0.29	12.1	2.8	2	23	1344	1366	1343	1366	0.94
28	31	0.012	0.93	10.5	5.1	1	23	1371	1394	1371	1394	0.96
29	31	2.7e-05	0.002	18.9	5.0	1	23	1398	1421	1398	1421	0.97
30	31	0.00032	0.024	15.6	0.3	2	23	1428	1449	1427	1449	0.96
31	31	1.1e-05	0.00084	20.1	0.6	1	23	1455	1477	1455	1477	0.98

Sequence Information

Coding Sequence: ATGATGGAGTTCGACGAGATTGTGGTGAAGGAGAGCCCCGGGCTTTGCCGGTGCTGTCTCTCCGAAGGATGCTACAAGGATTTGGGCACCGAATATACCTGGATGAATGAGACTGAGGTTTATGCTGATATGCTGCTCGAGTGTTTCGATATTAGCATAACCCAACACAATGAAGGTCCAAATGGCCCAAACCGGCTCATCTGTGAGGTCTGCATCACTCGGTTGCGGGATGCTTGCAACTTCAAGAAACAAGTCATGGACTCGGAGAAGAAATTCATTGATATGATGGGCAGGGGAGAATTTAGACCTAAGATGCTTATCTACCAGGCACACCTGAAGTGTGAGGGTCCAGCTGCGGTGGAGGAGCCTGATGATGCAGATGTTGAATATCTTGAAGATGATCTTGATTTTGGTGATGTCGATCTGAAAGATGAATTAATACAGCCTTCAGTATCAGACGTCACGGTAGCCGCGCTGCCGATCAAAGGCAAGCGCGGTCGTCCTCGCAAGAACACACCAATGAAGCCAGATAAAAGGGCCAAAGTGGCTAAGGTCGACGATAAGGCCAAGTCGTCGAAAGCTGTTGCTAAAGGTAAAAAACCGAGGAAATACAAGGGCACAGAGTCTTCCTCGATGAGAAGACGACGGAACCTACAAATTATATTCAACAATACATCCATTATTCCGTTTAAATGGCGTGGGAAGTATCTGTGTTTCTATTGCAGTAAAGATATTGCTGAATATACAGACTTAAGGAAACATACGAAAGCACACGGCAGCTGTTCCATAAAAGACCATTCTCTCAAAGTCCTAAAAGGAGGACAGAACATGGAAATTAAAGTAGACATTTCATTCATAAATTGCGAAGTTTGTGCTGAAACATTACCCTCTTTCGATGAAATAGTCGCTCATTTGTTTGACAAACATGAACTTGAGTACGATAAAGGAGTAGAAATGGCTATAGAAGAGTATAAACTTGCTGATCTCAGTTGCACCGGATGCGATGAAAAGTTCACGTATTTCGGCTACCTAGTATCTCATGTCAATAATACCCACCCGAAAAACTGCCTCATTTGCGATAATTGCAACCAAAAATTCAATAAACGGAGAGATCTGTTTTCTCACGTGAAAAATTACCATCGAGAAGGAGGTTACCAATGCGAAATGTGCCCTCAAATCTTCAACTCATTGAATATTTTGAGAAAACACCGAAATAACAGGCATTTGACTCGATGCAACATTTGCAATTTAAAACTGCCGTCAGCTGCTTTGAGACAAAAACATATCGACATAGAACATCCGGATGACGGATCTTTGCAATGCGATACCTGCTTCAAAGAGTTCCACACGAAACAAGGCCTAAAAATGCATTCAAGAAAATGTAAAGGAGAAGAAATTTTCGGAATCGCCATTAAAGAAGAAAATATTGCCATGGACTTAGATCTAAACTACGAGGATCAAGCCAAAAAACCATGCGTCAAACAAATCAGAGAAAATATAGTTATAGTAATCAACATGTCCACAGCAATACCTTTTAATTTTTATAAGAATAAGTTCAACTGCTTTTACTGCTCCAAAGATTTTGCTGATTCCGATTTGATGAGGGAACACGCGGTTATGGAACACCCGGTGTGCGATGTTAAAGAAAAGTGTATTAGGAAATGTAGGGAGTCCGTAGCTTGCGTCAAAATCGATATTTCTTCACTCGCTTGCAAAGTCTGCTTCGAGTCATTGACTGATTTGGATCATTTAATCGATCACCTTATCGCGAAACACGATGCGAAATACGACAAATCGATAACAACGTGTTTACAACCCTACAGGCTGATTAAAGACAACATGGTCTGTCCACATTGTCCCGGCGAAGTATTCCGCTTCTTCGGAACGCTTCTAAAACATATGAACATCAAACATACCAACAACAATATCATTTGCGTTTACTGCGGCCAAACGTTCCGTAGGGATCAGAACTTACGAGTTCACATTTGGCGTCACCATAGAGCTGGGCGGTTCAAATGCACCATTTGTGCAGCTGAGTGCAATATACCATCTCGTCTGTACATGCACATGGCCCGGGCACACGGCGTTAAAGCTGCTAAATGTCCCAAATGCCCCGAATCGTTCGCTACACAATATGATAGGCAGAAACATTTGATCATCGCCCACAATACTGGCCACAAATGCTCATATTGTGGAAAACTCTTTACGAGAAACTCGTTTATGAGTAACCATATAAGAAGGACGCATATGAAAGAGAAGAGTATAGAATGTTCAGTATGTTATACGAAGTTCTTTAACACTGTTCTGTTAAAAAGGCATATGGTAAAACATAGCGGGCAAAAGAAATATAGCTGTGACGTATGCGGGGAGAGGTTCTACTGGCGCAAGACTATGAAAACGCATAAAGATAGGCTGCATAGTAAACAGCTTTATCCTGCACCCATACTATGCCAAGTCACCTTGCAGGATTTGAACGACTTGATTGACCATTTAAGCAAAGAACATAAGGTGAAATGTGACTTTTCTGTCGAGAGTAATCTGCAGCCGTTCAAACTGATTAAAGACAACTACCCTTGTCCCATTTGCGGGGAAGTCTACCGATATTTTGGCGTTTTACTCAAGCACGTCAATGGCCTACCAGGGCCGTACGAAGGCTGTACCTCTGAGAGACGACGGAAAAACTTGAAAATACTGTTCAACAACACTACCATCATGCCATTTAAATGGCGGGGCAAATACCTTTGCTTTTACTGCGGAAAAAACTATACAGAATACACAGAATTTAGAAAGCATACAAAATCTCATGGACTTTGCACTACTAAAGATTACTCTCTTAAACTTATCAAAGGAAATAACATCGAAATTAAAATCGACGTCTCAGAAATCGGTTGTGATATCTGCAATGAACCCTTCAGCAGATTCGAAGAAATAATCGATCATTTGATCAGTAAACACAATATGGAATACAACAAAAATATCGATATACCGTTCCAGGAATATCGATTAGTCGATTTTCGATGTTTATATTGCGAAGAACAATTTTCTTATTTCGGATATTTGGTTAAACATGTTAATAACGTTCACCCGCAGAACTGTTTTATTTGTGATGATTGTGGAGTTACTTTCAATAAGAAGAGGGACTTGTCTATTCATTTAAGGAATTACCACAGACAGGGAGGATACCCCTGCGATTTGTGCTTGAAGAACTTCGAAACTCGCCTTACGTTGCGGAGGCATCAAAATAACATGCATTTTAGGCACTGTAAGAGCTGCGGCTTGCGTTTCGCGTCCCTTTCTCTCTTACAAAAACATGTACAAGTTGATCACCCCCAGAATGAGAGTAATATGAAGTGCAGTTACTGCTCCAAAGAGTTCCACACCTCTTTAGGCTTAAAACAGCATATAAGCAAATGTAAAGTCAAAATAATTTCTCAAGTGGAACCCCCCCACACTACTTTCCTAAACGACAGTAACATAGAACCTAAAAAAAAACAAAATATACTACAAATAAGACAGAATATACAGTGCGTACTCAACATGTCGACCGCTGTGCCTTTCAAATTCTTTTCCAAATACTCCTGCTTTTATTGCTCAAAGAAATTCGTAGAATTTGACGAGTTACGACACCATACCAGTCTTGAACATCCTGTATGCGACTTGAAGTCCAAATGCATGAAGAAATGCAAAGGAGAACGGATAGCTGTCAAAATTGACATATCTGGATTAGCTTGTAAAATATGTTGCCTCCCTATGCCTAATTTAGAAGATTTAATCAACCATTTAATAAACGAACACAAGGCGAACTATGATACGTCAATTTCGGGCTGTTTAGAGCCTTTCCGAGTTATAAAAGACAATATGCCATGTCCTATATGCCCGGATACCGTCTTCCGATACTTTGGCATTTTGCTTCGACATATGAATTCCGAACACAGTAATAACAACCGAATCTGTGACTTCTGCGGTCGAAGCTTTCGTAACGCGGCGAATCTTAACGTGCATATAACATACGCACACACAGGTTCATGCGAATGTGATATATGCGGAGTCAAATACAAGAACCAATGGTGCTTGGCGCGACATAGAGCGAGGACACACGATGCGAAGGACCACAAATGTCCAAAATGCCCCGAGCAGTTCCAATCACAATACCATAAACAAAAACATTTAATAAAAATGCATAATGTTGGCCATAAATGTAGTTACTGCGGGAAAATGTTTACTAGAAACTCCTTCATGAAAGACCATGTTCGAAGGACACATTTAAAAGAAAAAAACATTCCTTGCTCCATTTGTAATGAGAAGTTCTTCGATAATTATCTTTTGAGGATGCATATGGTCAAACATGAGGGGGACAGGAAATTTAGTTGTACTGTTTGTGGAAAGGCTTTCTTGAGACGAAGTAATTTGAGCTCGCATATGGAGATGCATAAAAAGTATGGGCATGTGCAGTTGCAGATTTAA
Protein Sequence: MMEFDEIVVKESPGLCRCCLSEGCYKDLGTEYTWMNETEVYADMLLECFDISITQHNEGPNGPNRLICEVCITRLRDACNFKKQVMDSEKKFIDMMGRGEFRPKMLIYQAHLKCEGPAAVEEPDDADVEYLEDDLDFGDVDLKDELIQPSVSDVTVAALPIKGKRGRPRKNTPMKPDKRAKVAKVDDKAKSSKAVAKGKKPRKYKGTESSSMRRRRNLQIIFNNTSIIPFKWRGKYLCFYCSKDIAEYTDLRKHTKAHGSCSIKDHSLKVLKGGQNMEIKVDISFINCEVCAETLPSFDEIVAHLFDKHELEYDKGVEMAIEEYKLADLSCTGCDEKFTYFGYLVSHVNNTHPKNCLICDNCNQKFNKRRDLFSHVKNYHREGGYQCEMCPQIFNSLNILRKHRNNRHLTRCNICNLKLPSAALRQKHIDIEHPDDGSLQCDTCFKEFHTKQGLKMHSRKCKGEEIFGIAIKEENIAMDLDLNYEDQAKKPCVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFADSDLMREHAVMEHPVCDVKEKCIRKCRESVACVKIDISSLACKVCFESLTDLDHLIDHLIAKHDAKYDKSITTCLQPYRLIKDNMVCPHCPGEVFRFFGTLLKHMNIKHTNNNIICVYCGQTFRRDQNLRVHIWRHHRAGRFKCTICAAECNIPSRLYMHMARAHGVKAAKCPKCPESFATQYDRQKHLIIAHNTGHKCSYCGKLFTRNSFMSNHIRRTHMKEKSIECSVCYTKFFNTVLLKRHMVKHSGQKKYSCDVCGERFYWRKTMKTHKDRLHSKQLYPAPILCQVTLQDLNDLIDHLSKEHKVKCDFSVESNLQPFKLIKDNYPCPICGEVYRYFGVLLKHVNGLPGPYEGCTSERRRKNLKILFNNTTIMPFKWRGKYLCFYCGKNYTEYTEFRKHTKSHGLCTTKDYSLKLIKGNNIEIKIDVSEIGCDICNEPFSRFEEIIDHLISKHNMEYNKNIDIPFQEYRLVDFRCLYCEEQFSYFGYLVKHVNNVHPQNCFICDDCGVTFNKKRDLSIHLRNYHRQGGYPCDLCLKNFETRLTLRRHQNNMHFRHCKSCGLRFASLSLLQKHVQVDHPQNESNMKCSYCSKEFHTSLGLKQHISKCKVKIISQVEPPHTTFLNDSNIEPKKKQNILQIRQNIQCVLNMSTAVPFKFFSKYSCFYCSKKFVEFDELRHHTSLEHPVCDLKSKCMKKCKGERIAVKIDISGLACKICCLPMPNLEDLINHLINEHKANYDTSISGCLEPFRVIKDNMPCPICPDTVFRYFGILLRHMNSEHSNNNRICDFCGRSFRNAANLNVHITYAHTGSCECDICGVKYKNQWCLARHRARTHDAKDHKCPKCPEQFQSQYHKQKHLIKMHNVGHKCSYCGKMFTRNSFMKDHVRRTHLKEKNIPCSICNEKFFDNYLLRMHMVKHEGDRKFSCTVCGKAFLRRSNLSSHMEMHKKYGHVQLQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -