Basic Information

Gene Symbol
Arid5b
Assembly
GCA_947363905.1
Location
OX376214.1:1380969-1394617[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-13 2.3e-10 41.2 0.0 3 89 237 310 235 310 0.90

Sequence Information

Coding Sequence
ATGATGATGATGCTTATTGGTGATGTTCTTCAAGAAGGTCAGGATGAAGTACTGGCCATCAACGATAAGGTAGTCCTGCGCGCAGACGACTTGCTCTCCTGGATGTGCGTGGGCACCGAGTGGCGGTGGGGGCTGCGGGCAGTGTGGCGCGGCGCCTGCGCCCCTCCCGCCGACCTGCCTCGCCACGCGCCGCTCACGCATACCAAACTGGACTTCAGTGATGTTGATTCTGAGAAGAGTTCTATTGTGGTGGACGCAGACGCTCCAGGCGTGGTAGTCTTCTCCTACCCGAGGTACTGCCGCTACAGGGCGCTGATAGCCAGACTCGAAGGCATACAAGCGTCTTGGTTGCGAGACTCCTTGGTCGCAGCGCTAGGAGGTTACGCGGCCCCTACTAGTAACACCAGGATACTGTACTGTAAGGAAACATTCGAGTACCCCGAGCTGGAGGGGCACGAGTTCGTGTGCAACCACCTGGCGCCGCGCCTCAAGGGTCGCCCGCGCGGGCGCCGGCGCCGCGCGCACACGCCCGACCGCGCGCACGAGCGGAACAGCGACCGGTCGGACTCCGACGACCCGCCCGCCACCGGGCCCGCGCACAGCAGTGACCCGCCGACCCCCCGCCGCCTGTCCCTCCGCAACGGCGCCCCCCCTCCCAGCGACGACGACGAGGAGGAGTACAAGCGAATAGAACAGACCCCCGAGGACAGAGCCTTCCTGCAGACGTTGAAGATGTTCTACAAGAGCAGGAGCGAGCCCTTCAAGAGTGGACACACTCTGAAGCACTTATCGCTCCGCGCGCTGTACCTGTCCGTGCTGTCGCGCGGCGGGTACGAGGCCGTGTGTCGCCACAAGCTGTGGCGCGCGCTCGCCCGCGACCAGCCCGCGCGCACCCGGCGGCACTATGAGAGATTCCTCCTCCCCTTCGAGAACCACGAGCGACGCAACGGCTCCTCCCTCAAACTGAACGGCAAGCTGGACGCCGAGCCGCGCACCATCGCCACCATCGACGTCACCGACTCCCCGCGACGGGAAGACAACGTGCTGCGCACTCCCGAGCCCGAGCCCAAGCTCGACAACTACGACAAACTCGACAAACTCGACACTTTCGACAAAATCGGAATCGACAGCGAAACTGGAGAAATAACCACCAAAGATGAAATTATAGTCAAAAACGCTGAAGAGCTGAACAGAGAATTCTTAGACTCTCTACCGAAAGAGGAGAAAACGGTTAAGATTTCGGTGAAACCGGTTGAGAAGCTGATCGAACCGGTTAAGGTTTTTGAGGGCTTGGATGTGTCCAAGTTTGAGGGACAGAAAGAGGAGGGGAGGGATTTTAGTCAAAATTATTTGAGTGATATGCAGAAATTTAGTTTGGGAGTGGATTCCGTATCGTCTCGTGCAACGCCTCTCAACGGTCACGCCGCACCTGCACCCACAGACCTTAAGTCGTCCCGGCCGCTGCCGGGCCGCAGCTCGCTGCGCGCGGTGCGCGTGAAGCCGGCGCGCCCGCACGCGCAGCGAGCGCCCGCCAGCACGCCCCCTCACCCGCTGCGCCCCGAGTCGCTCCCGGCGTCGCCTCCCGTCACGAACTTCGGCATCCACCACCCGCCGCCCGCGCCGCACGACGACGACATCGTCGAGGTCCCTTACAAGCCGAAAACCCCAGAAATTATCGACTTAGACGAGTACCCAGAGAGCCCCCAAGCAGTAAAAAAGAAGAAACTGGACATCCTAAAGGAACGAGGCCTCGAAGTGACCGCCCTGCCGGCCCCCTGGCAAGGCGTGGGCCCGCACATCATGGGCCCCCCCATGCTCCTCAACCCAGCAGTACAGCACCAGATCATGACGCAAGCACAGCTCTTCCAAATGTACAACATCATCCCACAGAACTATGCCAACGGAATACAGCCTCCAAAAGTCATCCAGGCATCTTCTATCTTCGGTAACACAGGGCCTGAGAAGACTGTCTATGGTAACCCCAAGGATCCCTTTATGCCACCTCCTCATGTTCTTCACGGAGTGCCCATGAAACCTTTGAAAACTGCCCCCCCTCCTACCATTCCTCAGGACATACTGGACCTGACCTGCAAGTCTTCGAGCCCCCCTCCGCAAAAACCAGCAGTCGAGATAGTGCGGGTACCCCCCTCCCCCTCCCCAACAGCACAGAATTTAACAAAGAATTACACTTTAGTCGACGGGAAAGCCGTCGTCGGATCGAATTTAGAAATAACGTTAGTCAATAAAGCTTCGAGTCCTGGTAAAAACCGGCCTCCACAGAAGAGGTCGAGCAATGGTAAGTTCATGTCGGCTAAAACTCCTACCCCGCCTAAGGAACCCTACCCTAAGTACGCTTCGCCTACCACTACCCAGAAAAAACCACCTATTAACATCCCCAACTACCAAATCAGAGAAGATTCTTCTCCTACCCAAAGCCAGGTTCTTCAAAACGCAATGAAAAACCAGAATCTAGCTCAAATAATGGATTTGCAAAAGAATTCAGTTCCTATGACGTCTTTTATGGACCCTTACGTGGCTCTATATAGCAGTTTGGCCGGTCAAATGGACCAGAGACAACTGGCAATGTACCGGGACCTGATGACCAATCAATTTAGATACCCAGGACTTCTAAACCTTGGCGTAGCGACACCGACAACGAAAAATTAG
Protein Sequence
MMMMLIGDVLQEGQDEVLAINDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPADLPRHAPLTHTKLDFSDVDSEKSSIVVDADAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTSNTRILYCKETFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAHTPDRAHERNSDRSDSDDPPATGPAHSSDPPTPRRLSLRNGAPPPSDDDEEEYKRIEQTPEDRAFLQTLKMFYKSRSEPFKSGHTLKHLSLRALYLSVLSRGGYEAVCRHKLWRALARDQPARTRRHYERFLLPFENHERRNGSSLKLNGKLDAEPRTIATIDVTDSPRREDNVLRTPEPEPKLDNYDKLDKLDTFDKIGIDSETGEITTKDEIIVKNAEELNREFLDSLPKEEKTVKISVKPVEKLIEPVKVFEGLDVSKFEGQKEEGRDFSQNYLSDMQKFSLGVDSVSSRATPLNGHAAPAPTDLKSSRPLPGRSSLRAVRVKPARPHAQRAPASTPPHPLRPESLPASPPVTNFGIHHPPPAPHDDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPAPWQGVGPHIMGPPMLLNPAVQHQIMTQAQLFQMYNIIPQNYANGIQPPKVIQASSIFGNTGPEKTVYGNPKDPFMPPPHVLHGVPMKPLKTAPPPTIPQDILDLTCKSSSPPPQKPAVEIVRVPPSPSPTAQNLTKNYTLVDGKAVVGSNLEITLVNKASSPGKNRPPQKRSSNGKFMSAKTPTPPKEPYPKYASPTTTQKKPPINIPNYQIREDSSPTQSQVLQNAMKNQNLAQIMDLQKNSVPMTSFMDPYVALYSSLAGQMDQRQLAMYRDLMTNQFRYPGLLNLGVATPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00374957;
90% Identity
iTF_00905897;
80% Identity
-