Lsem022191.2
Basic Information
- Insect
- Lithophane semibrunnea
- Gene Symbol
- osa
- Assembly
- GCA_947363905.1
- Location
- OX376207.1:5909768-5919994[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-26 1e-22 80.8 0.0 2 89 7 91 6 91 0.94 2 2 2.5 5.7e+03 -1.8 0.0 43 63 314 333 312 351 0.71
Sequence Information
- Coding Sequence
- atggacgacgcgcccgagcggcgcggctgggtggagcgcctgctggccttcatggacgagcgccgcacgcccatcgccgcctgccccaccatctccaagcagccgctggacctgtaccgcctgtacctgctcgtgcgcgaccgcggcggcttcgtcgaggtgacgaagaataagacgtggaaggacattgcggggttgctgggtatcggtgcgtcgtcgtctgcggcgtacacgcttcgcaagcactacacgaagaacttgctagcgtatgagtgccactttgaccgcggtggcattgacccacaaccgatcatcaaccaagttgaagcatccaccaagaaaaagagcggcaaaTCCAATAGTACGTCCAGTACAGCAGGGTCGTCGAATTCGCAAGAGTCGTTCCCCGCGGGCGCGGGCGCGGGCGGCGCGCCCATGGACGGGTACGCGGCGCAGTACGCCGGGTACCCGCCGCAACCCAACCACTCGCAAGGCGGCGGGCCGGGCGGCGACAACCTTGCCGCCTCCAACCCCTTCGACGAGCCGCCGGGGCCCAGGAGACCCCCAGGTTACCAACAAGGTTACGGGTACGAATACGGATCTCCTTACCAGCCGAATAGGCCTGTTTATCCTCCTTATGGTCCCGATGGTGACAGAGGGTACCGAGGCGGGTCCGTGGGGTCCGTGGGCGGGCCGGGCGGGCCGGGCGCGGGCGGCGAGTACCAGCAGTACGGCGCCTACGCCGGCGCCTACCGCGGCGCCGCGCCCACGCCCGCCACGCCGCCGCCCGCGCAGCCTTACCCCGACTACTACCGCCCGCCGCACCCGCAGCACCCGCAGCACCCGCACCCGCCGCACCCGCAGCACCCGCAACACCCGCAGCATCCGCAGCACCCGCCGCATCCGCCCATCTCGCCGCAACAGCCGCCGCATGAGATGTCGGGCGGCGCGCAGTCCGTCAGTAACTTATTGAACTCGCAGCTCGCGCGGCAGCTGGTGGCGCCGCTGTCGCCCACGCCCAGGCCCTACGTACGGACGCCCCGTTTGTACCACGCACTCAACACCGCTTCCCATCGATTGGCGATACGGTCTCATTCTCACCCGCACGGACTGCTCACGCGAGCCCCACAACACGATTCTCGTTTGCACACGATTTTAAATTACTATCGTGTGTAA
- Protein Sequence
- MDDAPERRGWVERLLAFMDERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKSNSTSSTAGSSNSQESFPAGAGAGGAPMDGYAAQYAGYPPQPNHSQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYQPNRPVYPPYGPDGDRGYRGGSVGSVGGPGGPGAGGEYQQYGAYAGAYRGAAPTPATPPPAQPYPDYYRPPHPQHPQHPHPPHPQHPQHPQHPQHPPHPPISPQQPPHEMSGGAQSVSNLLNSQLARQLVAPLSPTPRPYVRTPRLYHALNTASHRLAIRSHSHPHGLLTRAPQHDSRLHTILNYYRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01192402;
- 90% Identity
- iTF_01192402;
- 80% Identity
- -