Basic Information

Insect: Lithophane ornitopus
Gene Symbol: -
Assembly: GCA_948473465.1
Location: OX419642.1:2352176-2364016[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.25 17 6.4 2.5 1 23 385 407 385 407 0.95

2 9 2.1e-06 0.00014 22.3 0.9 1 23 454 477 454 477 0.97

3 9 5.2e-05 0.0036 17.9 0.3 2 23 483 504 483 504 0.97

4 9 1.3e-05 0.00092 19.8 3.4 1 23 512 534 512 534 0.97

5 9 2.9e-06 0.00021 21.9 1.4 1 23 539 561 539 561 0.96

6 9 2.5e-06 0.00017 22.1 1.4 1 23 570 592 570 592 0.99

7 9 4e-07 2.8e-05 24.6 1.0 1 23 598 621 598 621 0.98

8 9 0.21 15 6.6 0.9 1 14 627 640 627 650 0.79

9 9 4.1 2.9e+02 2.5 4.3 1 23 658 681 658 681 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.25	17	6.4	2.5	1	23	385	407	385	407	0.95
2	9	2.1e-06	0.00014	22.3	0.9	1	23	454	477	454	477	0.97
3	9	5.2e-05	0.0036	17.9	0.3	2	23	483	504	483	504	0.97
4	9	1.3e-05	0.00092	19.8	3.4	1	23	512	534	512	534	0.97
5	9	2.9e-06	0.00021	21.9	1.4	1	23	539	561	539	561	0.96
6	9	2.5e-06	0.00017	22.1	1.4	1	23	570	592	570	592	0.99
7	9	4e-07	2.8e-05	24.6	1.0	1	23	598	621	598	621	0.98
8	9	0.21	15	6.6	0.9	1	14	627	640	627	650	0.79
9	9	4.1	2.9e+02	2.5	4.3	1	23	658	681	658	681	0.94

Sequence Information

Coding Sequence: ATGTTGCACAACACAGGGCTTTATGGCCCGAACGAGGCGCCGATTAACATGGGAACGCCCGTTAATATGACACCAATGAGTGGTCATATGAATATCACTCATAACATTAATAATTTGAGCAAAATTGCCCACCAAGGCATTCCATCACCTAGCGGGCATTACAACCTACCGGACTATGCACATTACAACCACTCTCCAATAGGTATGCCGACGCAAATGAGTCAGTTTCCCAACTATCAACATCTGGGTTTCCAACATTCTTATATGAATCAAAATGCGAATAATATGAACGATTTACCATTCCCAAACGGTATGTTTCCTATGAATTTAAATATACAGAACGAGCATAACGCTAATATGATGAATTATGCTTATGATAAGAGAGTTATTGAGTCAGCGAGGCAGGAAAACTTTAAAGAGCAGAATATGCGAAAAATGCCTTTGAACATACCTCAAATACCAAATAAACTGTACAACAAACAAATTGGCGGGAACAACGACTTCATACACAGTAATATGTATGAAGAAACCCAACATAATATAGATTTAAGCATGAAAACTCAAGAAAAATTACAAATAAACAGTACAAGAAGGAAAAACATTGAAAATACGGTCAAATTAATTGAAGATATTCTTATTCACTCATCAAATAAACCTAAAGAAGTACCTGAAATGATTCCCATAGTACCAAACACCACAAACACTGACATTCCATCAGACATGACAGTTGAAAAAGTAACAAAACCATCGACAAATACCCTCGACTCTAATACGGACCCATTGGCACAATCTCCACCCGACTTAACTCTCAACAAATCAAATAAGGACAATGTTAAACCAAATCTAACAGAAAATGACAGTAGAGATAAACAAAAATCAGAAAATGACTTGTCATCAGACGATGAAGAATTAAAACCTACAGGAATCACACAACACTTCATAAGGGAAGATGCGGAAGTGACGACCGACAATAGTATTGTTATTAAGGTTGAGAAAGCAAGTTGGGCAGACTCTGAATGCTTCACTCCGTTCTTGAAAGACTGTCATGGGTTTGAGAGGGACGAACATATGAATTATAGAATTATTGAAGGTGACTGTAGCATTGCTGAAGCGGTTACTTCTTATAAAAATGACATAAAACCAGAAGGAGTATTCGAATGTCCGCACTGCGCTCTCCTCTTTAAACACCCAAAAAGATTTATAATACACAATAAATGGCATACATTCGGCCTAACGAACATTAAAAGAATGGAGATCGCAAAAGTAAGAGAACAAAAGAGGTTTGAAAGAAAAGAGGCAAAGATTATAGAGCGAATGAACTCTAAAGAGGTTACGGACATTAAGGTGGACGGAAAGGTGTTTCCGTGTAAGGATTGTGATAAAGTGTTCAGTGCTAAAGGGAGCTTGAAAAATCATAGGCAAAGAACACATCCAACCCGCATAAGAGAGTGCAAAATCTGTCACAAAGTAATATCTAGCTGGACGGCTCTTCGAGCGCACTTAGCGACTCACTCAGCGGATTCGGGGCTCGGCTACCAGTGTAGCGACTGCCCTAAGAGGTTCAAGTACTCGCACTCGCTGGCTAAGCACTCTGACACTCACTTGGAAAAAGTCCACGCCTGCACGGATTGCCCTAAGAAATTCGGGTCACAGGCTCTCCTGAAGATGCATATGAAGACTCACGAACGAATGTTGCGTGGCGCCACCTACCGGTGTACTTACTGCGGGAAAGGATTTTTTGAGTCGTATAGTTTACAGGTACACGAAAGGACACATCGAAACGAGAGACCATATACATGTGACATCTGTAACACTAGCTTCGGAACTAACTCTAGTCTCAAAAGACATTTGAAAGTGTCCCACAACACAGCGAAGCCCCATCAGTGTACTGTATGTCGGCGCAACTTCTCAACGGAATCCATCAGGGACAGGCACGAGCTCAGGCTCCACGGAAACCCTGAAGACTTCAAGTTTCCTTGCAAACAGTGTTCTTGCAAATATTTAAAACTAAAAGATCTTCAAAAACACGTCTACAAAATGCATCCCAAAGGCAAGAGGAAGAAAAAGGTGCAAGTAAGCGATTCGGAATAG
Protein Sequence: MLHNTGLYGPNEAPINMGTPVNMTPMSGHMNITHNINNLSKIAHQGIPSPSGHYNLPDYAHYNHSPIGMPTQMSQFPNYQHLGFQHSYMNQNANNMNDLPFPNGMFPMNLNIQNEHNANMMNYAYDKRVIESARQENFKEQNMRKMPLNIPQIPNKLYNKQIGGNNDFIHSNMYEETQHNIDLSMKTQEKLQINSTRRKNIENTVKLIEDILIHSSNKPKEVPEMIPIVPNTTNTDIPSDMTVEKVTKPSTNTLDSNTDPLAQSPPDLTLNKSNKDNVKPNLTENDSRDKQKSENDLSSDDEELKPTGITQHFIREDAEVTTDNSIVIKVEKASWADSECFTPFLKDCHGFERDEHMNYRIIEGDCSIAEAVTSYKNDIKPEGVFECPHCALLFKHPKRFIIHNKWHTFGLTNIKRMEIAKVREQKRFERKEAKIIERMNSKEVTDIKVDGKVFPCKDCDKVFSAKGSLKNHRQRTHPTRIRECKICHKVISSWTALRAHLATHSADSGLGYQCSDCPKRFKYSHSLAKHSDTHLEKVHACTDCPKKFGSQALLKMHMKTHERMLRGATYRCTYCGKGFFESYSLQVHERTHRNERPYTCDICNTSFGTNSSLKRHLKVSHNTAKPHQCTVCRRNFSTESIRDRHELRLHGNPEDFKFPCKQCSCKYLKLKDLQKHVYKMHPKGKRKKKVQVSDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00071769;
90% Identity: iTF_00746099;
80% Identity: -