Basic Information

Insect: Lithophane ornitopus
Gene Symbol: -
Assembly: GCA_948473465.1
Location: OX419614.1:2045037-2061058[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0037 0.26 12.1 4.6 1 23 318 340 318 340 0.99

2 11 7.8e-05 0.0055 17.4 1.4 1 23 346 368 346 368 0.98

3 11 8.3e-05 0.0058 17.3 1.7 1 23 374 397 374 397 0.96

4 11 0.035 2.4 9.0 3.3 1 21 403 423 403 425 0.95

5 11 0.00081 0.057 14.2 3.8 1 23 431 453 431 453 0.99

6 11 1.7e-05 0.0012 19.5 5.3 1 23 459 481 459 481 0.98

7 11 0.0038 0.27 12.1 0.9 1 23 489 512 489 512 0.97

8 11 0.02 1.4 9.8 4.3 2 23 519 540 518 540 0.96

9 11 3.7e-05 0.0026 18.4 2.8 1 23 546 568 546 568 0.99

10 11 4.1e-06 0.00029 21.4 1.6 1 23 574 597 574 597 0.96

11 11 0.00015 0.011 16.5 4.4 1 23 611 633 611 633 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0037	0.26	12.1	4.6	1	23	318	340	318	340	0.99
2	11	7.8e-05	0.0055	17.4	1.4	1	23	346	368	346	368	0.98
3	11	8.3e-05	0.0058	17.3	1.7	1	23	374	397	374	397	0.96
4	11	0.035	2.4	9.0	3.3	1	21	403	423	403	425	0.95
5	11	0.00081	0.057	14.2	3.8	1	23	431	453	431	453	0.99
6	11	1.7e-05	0.0012	19.5	5.3	1	23	459	481	459	481	0.98
7	11	0.0038	0.27	12.1	0.9	1	23	489	512	489	512	0.97
8	11	0.02	1.4	9.8	4.3	2	23	519	540	518	540	0.96
9	11	3.7e-05	0.0026	18.4	2.8	1	23	546	568	546	568	0.99
10	11	4.1e-06	0.00029	21.4	1.6	1	23	574	597	574	597	0.96
11	11	0.00015	0.011	16.5	4.4	1	23	611	633	611	633	0.96

Sequence Information

Coding Sequence: ATGCATAGGCCTTTTCTGTCTGTAGTAGAAGAGACCTTTGCCGAGCATTGGAAAATGACTGGGGAGATAATTGAAGAAACTCTAGAGAAACCACCTTCCCATGATAAGCCCATTCAGATAAAAGAGAATATCTTGGTCACTCCGAAGAAGAAAATAATTCAGGAAAAGGAGGTAAGCCAAGAGTGCCTTTCCATTCAAGTGAAAGAAGTTCAAGAAAAGGAGGTAAGCCAGGAGCGCCTGGCTAGTCAAGATTGCGCAGAGAAAGATAACCCAAAAGAAAATAAGAAGAGCTTGACAGAAAAACCAACCATGCCACCTCCAGATAAAAAGGAGAAGAGCAAGCAAGCGCTCATTCAAACATACTTGAACCAAGAAGCAGTCATTGCTGTGTCAGATTTGACAACTGATGTCATTGAAAAGAGCGTTCAGTGCAATCATGAGGATAGTAATTTTCTTCACTTGTGGAGTGGGTTGTTAAATTATTTTTTAAATTCTGAAGTCAATGCTGCAACGGATGAAAAAGGCTTGCCCTCGGGAATGGTTGAGTACTACGTAGACGAAGATGGCAAGTACTACTACCAGTCAGCAGTGGAAGGACAGGCCTTGGTCATGAATAATTCTGAAGACAACCAAGACAATGAGGTGGCTGCTGAAGGTTCGGACCCGATACTGACCGATCAGGAGGAAACTTACCAAACGGTCACGTTGGTCCCTTCTGAGACCAACGGGGAGGTTAGCTACGTGCTGGTAGTACAGGACGAGACCAAGGGGGTCGTCAACATCGATCTCAAGGTGGACCAGTCCGAAGCGGAGGACAAAGGCAACGATGACGTGTACAACTTCGAAGATGAGGAGGCCGGCGAGGAAGAGGAGGAAGAGGAAGAGGAGGTGACCGAGGGCAGGCCCATCAAGACCGTGCAGAAGCGAAGCCTCGCGCACATGCGGCCAAACTACACCTGCAACTTTTGCGCCTACACCAGTCATCGAAGGTACCTCCTGCTGCGCCACATGAGGTCGCACTCTGAGGACCGTCCGCACAAGTGTAGCGTGTGCGAGCGAGGCTTCAAGACCATGGCCTCGCTGCAGAACCACGTCAACATGCACAACGGCATCAAGCCGCACGTCTGCAAGTACTGCAACAGCCCCTTCACCACCTCGGGCGAGCTGGTCCGCCACGTGCGCTACAAGCACACGCACGAGAAGCCGCATAAGTGCACGGAATGCGACTACGCGTCTGTCGAGCTGTCCAAGCTGCGCCGCCATGTCCGCTGCCACACCGGCGAGAGACCCTACCAGTGCCAGCACTGCACGTACGCATCCCCGGACACGTTCAAGCTGAAGCGCCACTTGCGCACGCACACGGGCGAGAAGCCCTACAAGTGCGAACACTGCAACATGTGCTTTACGCAGTCCAACTCACTGAAGGCTCACCGGCTCATACACAACGTATCCGAGAAGCCGGTGTACTCGTGCGAGCTCTGCCCGGCCAAGTGTGGCCGTAAGACGGATCTGCGCATCCACGTGCAGAAGCTACACACTTCCGACAAGCCGTTAAAGTGCCGCCGCTGTGGCAAGTCCTTCCCCGACCGCTACTCCTGCAAGGTGCACAACAAGACCCACGAGGGAGAGAAGTGCTACAAGTGCGACCTGTGTCCATACGCGTCGACCACGCAGCGCCATCTCAAGACGCACATGCTCAAGCACACCGATGAGAAGCCGTTCGTCTGCGACCTGTGCGATCAGTCGTTCAGGCAAAAGCAGCTGCTCCGTCGCCACCAGAACCTGTACCACAACCCCAACTACGTGCCGAAGCCGCCGAAGGAGAAGACTCACTCTTGTCACTCTTGTCAGCGCATGTTCGCGCACAAGGGCAACCTCATCCGCCACTTGGCCGTGCACGACCCCGAGTCGGGACACCACGAGCGTGCGCTCGCCCTCAAGATCGGCCGCCAGAGGAAGGTGCGATTCGTCGATGGAGAGCCTATGAGGGACATTCGCGTCTTAGACTCTGCCGACGCGGAGAACATGATGAAGTTGGGTCTCACCAAGAATGATCTGAAGCGTGGCGAGCTGGTGACTGTGGGCGACGGCGACGGCCAGCAGTACGTGGTGCTGGAGGTCATTCAACTGGAGGACGGCACGGAGCAGCAAGTCGCCGTCGTGGCGCCAGAGTACAACATGGATGAGGATGAACCTGAAGAGGACGAGGAAGAAGAGGAAGAAGAAGAAGAAGAGGAGGACGAGGAAGAAGAAGGCGAGGACAGAAGCTTCATAGTGAAGGACTCTACTGTCACCTCCACGAGCATCAAACTTGAGAAAGAGGTCGACACATGCTTCGGATTCGATGAAGAAGAAGAGGATCCCGAAGATGAAAATTACACGGACAAAGTTGTTCTGAGTTTAGTTTAG
Protein Sequence: MHRPFLSVVEETFAEHWKMTGEIIEETLEKPPSHDKPIQIKENILVTPKKKIIQEKEVSQECLSIQVKEVQEKEVSQERLASQDCAEKDNPKENKKSLTEKPTMPPPDKKEKSKQALIQTYLNQEAVIAVSDLTTDVIEKSVQCNHEDSNFLHLWSGLLNYFLNSEVNAATDEKGLPSGMVEYYVDEDGKYYYQSAVEGQALVMNNSEDNQDNEVAAEGSDPILTDQEETYQTVTLVPSETNGEVSYVLVVQDETKGVVNIDLKVDQSEAEDKGNDDVYNFEDEEAGEEEEEEEEEVTEGRPIKTVQKRSLAHMRPNYTCNFCAYTSHRRYLLLRHMRSHSEDRPHKCSVCERGFKTMASLQNHVNMHNGIKPHVCKYCNSPFTTSGELVRHVRYKHTHEKPHKCTECDYASVELSKLRRHVRCHTGERPYQCQHCTYASPDTFKLKRHLRTHTGEKPYKCEHCNMCFTQSNSLKAHRLIHNVSEKPVYSCELCPAKCGRKTDLRIHVQKLHTSDKPLKCRRCGKSFPDRYSCKVHNKTHEGEKCYKCDLCPYASTTQRHLKTHMLKHTDEKPFVCDLCDQSFRQKQLLRRHQNLYHNPNYVPKPPKEKTHSCHSCQRMFAHKGNLIRHLAVHDPESGHHERALALKIGRQRKVRFVDGEPMRDIRVLDSADAENMMKLGLTKNDLKRGELVTVGDGDGQQYVVLEVIQLEDGTEQQVAVVAPEYNMDEDEPEEDEEEEEEEEEEEDEEEEGEDRSFIVKDSTVTSTSIKLEKEVDTCFGFDEEEEDPEDENYTDKVVLSLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00746064;
90% Identity: iTF_01441333;
80% Identity: -