Basic Information

Insect: Lithophane ornitopus
Gene Symbol: clz9_1
Assembly: GCA_948473465.1
Location: OX419628.1:13230891-13233623[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.1e-11 2.9e-08 33.6 0.0 1 40 15 55 15 59 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.1e-11	2.9e-08	33.6	0.0	1	40	15	55	15	59	0.94

Sequence Information

Coding Sequence: ATGCCGCGAAAATATATAAGAAAAACTGATAGAAGCAGTTATGATAATgataaattaagtgaggctgtcaatgcagtaaaaaatggaacaatatctgcatacgctgcatcaaaactttataatataccaagaacaacaattgttaaccgtgtatacgaccgcaaaggtttaaaatccaaaactttaggcaggtgtactgcattgcctacggatgtggaagaaacacttgcggaaaatctccatgtcatggaaaagtcagggtttgggttaacgcgcaaggaagtgattgaattagttggccaatacgtggttgagaataatattaaaactccgtttagagatgggatccctggagaggactggtttcttgcttttaagaatagacatggcctttccgttaaaaaaccccaggccgttgaacatgcacgtaaagctgcatgcagacctttcgtgatctacagttactttgatttattagaggaaactatcaatgaactgggcttatgtgataaaccatcgcatatttggaatctcgacgaaaccagcttcagcaaggacccaagtaaatcaaatgttgtcggtcgtcgaggctatacgtctacaagaaccatcgcctctccagggaaaacgaatacaactgtgcttttagcatgcagtgccgctggtgacaaagctccgccgctaattatatatacaggcaaaaatatctggaacgaatgggtttctaaagatgggtttcctggaacagtttatgctgcgacagaaaaaggttggatggaagcgacagtattcgaaaactttttcgaaaaagtttttttgccaaccgttgaaaataaacgccctattctcttgctttacgatggtcattctactcatgtgggaattattattatacaaaaggcacgagaaaacaacataacgattttaaaaatcccaccgcatacgagtcatttattgcagcctctggatctagaggtaaataaatcgttcaaagacaaatgggacatagcgttggtcaaatggcaaagattgaaagtcggcaaggttttacccaaaaaagagttttcaacgattcttggtcaagtgtggactcagatagattctcaagtatgtcaagcaggctttcgtaaagcagggatatacccaATAAATAAAAATGTCATAGCTGAAGAGAAATTTGATCCAGTTCAGTTAGCAGAATGGAAGAATGAACAGCTACAAAAATCACAAAATCAGCTTGTTAAACAAATATCCCCCAAAAAGTTGAGTGAAATCGCACTGACTGTTTTAAATGAAACATTTATAATACAGCAGGAAGTTCCTCAGTGTAATTTAATAGAAGCGTCACCAAAGTACGTTTTACACAGCGAAGAAAAAGCTGCTCCATTGCTAAATATTGAAAATGTTCAACAGCGTCCTAAAGTCCAAATTCTTGACAATCAGCGTGTATATACCAATGTCACATTTGAAGAGTTGCTTCTGAAAATGATTAAACCTGGAAAACCATCTTTGACAACCAAAAGAACAAAAATAGCGCCAGGAGCAGAGGTCATCACTCATGATCTTGTGTACGAAAGATATCAAATAAAGGAAGCAGAAAAAAAAAAAAAGTTGAAAAAACGAGAAGAAAACAAAGCAAGTAAAGAAAAAAAGAAACCAACGGAAAAAAGAGCGAGCACAAATAATAAGACAGGAGCAGAAAAAAAGAACGGGGAGGAAAGGTGTGAGAACGGAGGTGATTATAAGCAGACTGATGTACAGGTTTCTGGAGTGGATATGTCATTACCAGGTCCATCAGGTCTTAACAAAAAGAGGAAAATTAAAAGTGAGTCAAAAAAGAGTAAAACCATAAATTCTACAAAAAAAATAATTCGACGAAATAAAAAGCTCAGAAAAATATCATCATCCTCATCTACCAGCATATCTGATTGCATGAGCGTGCATGAGGATTCTGATATTATAGATTTGACCGATGAAGAATATGATATAACAAGAGATTTATACAGTAACGAATTTTTACAAAATTATGAACCCTATAGTGAACAAGAGGATGAAATCTTTATCTTAGATAAGAAAAGCAATGTGGTGAAGAAAGTTGGTAAGAATTTGGACAAGCGAAGCAAGGAGACAGTGAATTTTAGAGAGGAATCAGATGAAACTAATATGGTAGCAGGGGAATTTAACGGCGAATGGGATGGGCTGACAGAAGTGGAAAACGAAGAGTATTGTGCATCTAATGAACAAGTAGTTACTGAGGGGAACAAGGTGGTACATGAAGTCAGTGGAATATCGGATGAGAGAAACGATGTGCTGGAAAAAGTTTGTGATAGTTCGGATGACAGATATCAGGCGGCAAAGGAAGTTGGTGAGAGATCGCATCAAAGGAACAATAATACTATGGCAAAAGCAGGTAATGACAAATGGGATATGAAGAATATAGAAGAGAAAGAGAATTATAAAATAAATGACAATGTCTTGATTCGATACTTTATCAGGAAAAGGTGGGTGTATTATGTAGGTTACATAGAAAATATACTTTCTGGAAGCGATACTAGTTATGATATAATGTTTTACAAAACTTACAAAAAGCCACTGAAATTCAAACTCGCTAAACAAGTAGATCGTGATACTGTTTTAGAATACTCTGTAGTCAAGAAAGTTCGCCTGTCTCAAAATCCTAGTAATTCCAAAGAATTTATTTTAGATGAAGAAGATCATTCATATTTTTCATAA
Protein Sequence: MPRKYIRKTDRSSYDNDKLSEAVNAVKNGTISAYAASKLYNIPRTTIVNRVYDRKGLKSKTLGRCTALPTDVEETLAENLHVMEKSGFGLTRKEVIELVGQYVVENNIKTPFRDGIPGEDWFLAFKNRHGLSVKKPQAVEHARKAACRPFVIYSYFDLLEETINELGLCDKPSHIWNLDETSFSKDPSKSNVVGRRGYTSTRTIASPGKTNTTVLLACSAAGDKAPPLIIYTGKNIWNEWVSKDGFPGTVYAATEKGWMEATVFENFFEKVFLPTVENKRPILLLYDGHSTHVGIIIIQKARENNITILKIPPHTSHLLQPLDLEVNKSFKDKWDIALVKWQRLKVGKVLPKKEFSTILGQVWTQIDSQVCQAGFRKAGIYPINKNVIAEEKFDPVQLAEWKNEQLQKSQNQLVKQISPKKLSEIALTVLNETFIIQQEVPQCNLIEASPKYVLHSEEKAAPLLNIENVQQRPKVQILDNQRVYTNVTFEELLLKMIKPGKPSLTTKRTKIAPGAEVITHDLVYERYQIKEAEKKKKLKKREENKASKEKKKPTEKRASTNNKTGAEKKNGEERCENGGDYKQTDVQVSGVDMSLPGPSGLNKKRKIKSESKKSKTINSTKKIIRRNKKLRKISSSSSTSISDCMSVHEDSDIIDLTDEEYDITRDLYSNEFLQNYEPYSEQEDEIFILDKKSNVVKKVGKNLDKRSKETVNFREESDETNMVAGEFNGEWDGLTEVENEEYCASNEQVVTEGNKVVHEVSGISDERNDVLEKVCDSSDDRYQAAKEVGERSHQRNNNTMAKAGNDKWDMKNIEEKENYKINDNVLIRYFIRKRWVYYVGYIENILSGSDTSYDIMFYKTYKKPLKFKLAKQVDRDTVLEYSVVKKVRLSQNPSNSKEFILDEEDHSYFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01156263;
90% Identity: iTF_00147274;
80% Identity: -