Lorn016432.1
Basic Information
- Insect
- Lithophane ornitopus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_948473465.1
- Location
- OX419636.1:11360915-11371193[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-14 5.7e-11 42.2 0.0 1 37 77 114 77 118 0.92 2 2 1e-18 7.4e-16 57.9 0.0 1 43 287 330 287 332 0.95
Sequence Information
- Coding Sequence
- ATGTGTTTAAGTTATGAAATGTTATATTATGCGTGGAGGCTACCGGAGGTGGGCGAGAAGGCGCCGGCGTCTTCGTCCCCCAACCTCGCGGAACAGCCGCTGGACCTCAGCGCCAAGTCTACCTCCAGCACCAGTGGAACTCCACCTCCTGACTCCAAGCATTTGGATAATAGATTGAAGCGAGCGGTTCTAGAGGGCGCCAGCAACAGTTCTGGTCGTCGCGCATATACTGAAGAGGAACTCCAGTCAGCCGTCCGTGACATCCAGTCGGGCCGGCTGGGCACCCGCCGAGCCGCCCTCATCTACGGCATCCCGCGCTCCACGCTGCGCAACAAACTCAACAAGTTTGGCACCGTCGTCGACCACGTTGACTCCGACAACGACAGCGATGCCGACCGCGCCGACTCGCCCCCCTCCGTCATCCTCAAAATACCCACTTTCCCCCCGCCAGACGACAAAAGCCCATCCCCCGCTGGACAACACCAGGCCCCCATCGCGCCAATAACACCGATGCTCCCCACGGGTCAATCCTCACTCAAGGGACCCTCACAGCTGCTGCTCCCGCCCTCCGTGTTCGCCGACCCTCCCTCAACACAACACCTCTTCACGTCCCTCAGTGACGTTATCGCTAAAAGCATCAGCCAGAAGTTCCAGCAACCCTTAGATAGGCCGCACCACCAGCCCAGTGAACTTATGTACGCGCGAGGCCCTGACCGACACGTGTCTGTCATCAAGACTCCGCCTGATAACCAGCGCTACCCGACGCCTGGCAACTCTAAGCAAATGCCCAACAACAACGGCCAGCCGGCCACCGGCGGCAAGGGCACGCGACCCAAACGTGGCAAGTACCGGAATTACGACCGAGACAGTCTTGTGGAGGCGGTGAAGGCCGTTCAGCGCGGAGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCAACACTCGAGTACAAGGTCAAGGAGCGCCACCTCATGCGGCCGCGGAAGCGAGAGCCCAAGCCGCCGCAGGACGCCAGCAAACCGCAGCCACCAAAGCCGCCGCCGCCGAAGCCGCCGACGAAGCCGTTCTCCAACGGACTCAATGGGCCAGAAGCTCCGGGTTACCCTCCCGGCTACCCGTTCTGGCCTGGCAGTGGGTTCCCACCGCCACCCGCTCCCGACTTGTACGCCTCGCACATGATGCGACGACTGCGTGAAGAGGCGCCCCCGCCCGCCAACGGCTCGTTCCTGGAGGGCATCATCAGGTCGAGCCTAGAGCGGCCCGCGCTGCTGCAGCGGCTAGCGGCGCCGCCAGGCGGCGAGGCGCGCCGGCCGCCGCTGCCAGACGGCGACGAACCGCCGGCGCGCCGCGCGCGGCTGGACAGCTCGGACCAGGCGCTGGCGGCGGAGATGCGCGAGGCGGTGCAGCGACTGCGCGCCGACAAGCTGCGACCGCGCAACGGCACGCCCACGCCGCCGCCCGCGCCGCCGGCCGAGCCGCCGCCGCCGCCGGCCGCGCCGCCGGACCGCGCCTAG
- Protein Sequence
- MCLSYEMLYYAWRLPEVGEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDSKHLDNRLKRAVLEGASNSSGRRAYTEEELQSAVRDIQSGRLGTRRAALIYGIPRSTLRNKLNKFGTVVDHVDSDNDSDADRADSPPSVILKIPTFPPPDDKSPSPAGQHQAPIAPITPMLPTGQSSLKGPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHHQPSELMYARGPDRHVSVIKTPPDNQRYPTPGNSKQMPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDASKPQPPKPPPPKPPTKPFSNGLNGPEAPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPPGGEARRPPLPDGDEPPARRARLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPPAEPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_00122280;
- 80% Identity
- -