Basic Information

Gene Symbol
arid5b_1
Assembly
GCA_948473465.1
Location
OX419643.1:387049-401157[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.5e-14 5.4e-11 43.0 0.0 3 89 231 303 229 303 0.91

Sequence Information

Coding Sequence
ATGAACGTAAACGAAGCAGAGGGAGACGAAGTACTGGCCATCAACGATAAGGTAGTCCTCCGCGCAGACGACTTGCTCTCCTGGATGTGCGTGGGCACCGAGTGGCGCTGGGGGCTGCGGGCCGTGTGGCGCGGCGCCTGCGCCCCTCCCGCCGACCTGCCTCGCCACGCGCCGCTCACGCATACGAAACTGGACTTCAGTGATGTTGATTCTGAGAAGAGTTCTATTGTGGTGGACGCAGAGGCTCCAGGAGTGGTAGTCTTCTCCTACCCGAGGTACTGCCGCTACAGGGCGCTGATAGCCAGGCTCGAAGGCATACAGGCGTCTTGGTTGCGAGACTCCTTGGTCGCAGCGCTAGGAGGGTACGCGGCCCCTACTAGTAACACCAGGATACTGTACTGTAAGGACACATTCGAGTACCCCGAGCTGGAGGGGCACGAGTTCGTGTGCAACCACCTGGCGCCGCGCCTCAAGGGCCGCCCGCGCGGGCGCCGGCGCCGCGCGCACACGCCCGACCGCGCGCACGAGCGCCACAGCGACCGCTCCGACTCCGACGAGCCGCCCGCCACCGGGCCCGCGCACAGCACTGACCCGCGGACGCCCCGCCGCCTATCCCTCCGTAACGGCGCCCCCCCTCCCAGCGACGACGAGGAGGAGAAGTTCATGCGAATAGACCAGACTCCCGAGGACAGAGCCTTCCTGCAGACGCTGAAGATGTTCTACAAGAGCAGGAGCGAGCCCTTCAGCGGACACACTCTGAAGCACCTGTCTCTGCGCGCGCTGTACCTGTCGGTGGCGGCGCGCGGCGGGTACGAGGCGGTGTGTCGGCACAAGCTGTGGCGCGCGCTCGCCCGCGACGCGCCCGCGCGTCTGCGCCGGCACTATGAGAGATTCCTCCTCCCGTTCGAGAACCACGAGCGCCGCACCGGCTGCTCCCTCAAGCTGAACGGCAAGCTGGACGCCGAGCCGCGCACCATCGCCACCATCGACGTCACCGACTCCCCGCGCCGGGACGACACTCCCGAGCCCAGGCTCGACGGCTACGACAAACTTGACAAACTCGACAAACTCGACACTTTCGACAAAATCGGAATCGACAGCGAAACCGGAGAAATAACCACCAAAGATGAAATTATAGTCAAAAACGCTGAAGAGCTGAACAGAGAATTCTTAGACTCGCTACCGAAAGAGGAGAAAACGGTTAAGATATCGGTTAAACCGGTCGAGAAGCTCATCGAACCGGTGAAGGTTTTTGAGGGCTTGGATGTGTCCAAGTTTGAGGGACAGAAAGAGGAGGGGGGGGATTTTAGTCAAAACTTTTTGAGTGATATGCAGAAATTTAGTTTGGAAGCGGAGTCCCTATCGTCTCGTGCAACGCCTCTCAACGGCCACGCCACACCCGCACCCACAGACCTTAAGTCGTCCCGGCCGCTGGGCCGCAGCTCGCTGCGCGCGGTGCGCGTGAAGCCCGCGCGGCCGCACGCGCAGCCCGCGAGGCCGCACGAGCAGCCCGCGCGGCCGCACGCGCAGCCCGCGCGGCCGCACGAGCAGCCCGCGCGGCCGCACGCACAACCCGCTCGGCCGCACGAGCAGCGAGCGCCGGAAGGCACAACCCCTCACCCGCTGCGCCCCGAGCCGGTCCCGCGGTCGCCGCCCGTCACGAACTTCGGCATACACCGGCCGCCGCGCGCCGCGCACGACGACGACATCGTGGAGGTCCCATATAAGCCAAAAACCCCAGAAATAATCGACTTAGACGAGTACCCAGAGAGCCCTCAAGCGGTAAAAAAGAAGAAACTGGACATCCTAAAGGAACGAGGCCTCGAAGTGACCGCCCTGCCGGCGCCCTGGCAGGGCGTGGGCCCTCACATCATGGGCCCCCCCATGCTCCTCAACCCAGCAGTGCAGCACCAGATCATGACGCAAGCGCAACTCTTCCAAATGTACAACATCATCCCACAGAACTATGCCAACGGAATACAGCCTCCGAAAGTGATCCAGGCGTCTTCTATCTTCGGTAACACAGGGCCTGAAAAGACTGTCTATGGCAACCCCAAGGACCCCTTCATGCCACCTCCTCATGTTCTTCACGGAGTGCCAGTCAAACCTTTGAAAACTGCCCCCCCTCCTACCATCCCTCAGGACATACTAGACCTGACCTGCAAATCTTCGAGCCCCCCTCCGCAGAAACCAGCAGTCGAGATAGTAAGGGTACCTCCCTCCCCCTCTCCAACAGCACAGAATTTAACAAAGAATTACACTTTAGTCGACGGGAAAGCCGTCGTCGGATCGAATTTAGAAATAACATTAGTCAATAAAGCTTCGAGTCCGGGCAAAAACCGGCCCCCACAGAAGAGGTCGAGTAATGGTAAGTTCATGTCAGCTAAAACTCCTACCCCGCCTAAGGAACCCTACCCTAAGTACACTTCGCCTACCACGACCCAGAAAAAACCACCTATTAACATCCCCAACTACCAAATCAGAGAAGACTCCTCTCCTACCCAAAGCCAGGTTTTGCAAAACGCAATGAAAAACCAGAATCTAGCTCAAATAATGGATTTGCAAAAGAACTCAGTTCCTATGACGTCTTTCATGGACCCTTACGTGGCTCTATACAGCAGTTTGGCCGGTCAAATGGACCAGAGACAACTGGCTATGTACCGAGACCTGATGACCAATCAATTTAGATACCCAGGACTTCTAAACCTTGGCGTAGCGACACCGACAACGAAAAATTAG
Protein Sequence
MNVNEAEGDEVLAINDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPADLPRHAPLTHTKLDFSDVDSEKSSIVVDAEAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTSNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAHTPDRAHERHSDRSDSDEPPATGPAHSTDPRTPRRLSLRNGAPPPSDDEEEKFMRIDQTPEDRAFLQTLKMFYKSRSEPFSGHTLKHLSLRALYLSVAARGGYEAVCRHKLWRALARDAPARLRRHYERFLLPFENHERRTGCSLKLNGKLDAEPRTIATIDVTDSPRRDDTPEPRLDGYDKLDKLDKLDTFDKIGIDSETGEITTKDEIIVKNAEELNREFLDSLPKEEKTVKISVKPVEKLIEPVKVFEGLDVSKFEGQKEEGGDFSQNFLSDMQKFSLEAESLSSRATPLNGHATPAPTDLKSSRPLGRSSLRAVRVKPARPHAQPARPHEQPARPHAQPARPHEQPARPHAQPARPHEQRAPEGTTPHPLRPEPVPRSPPVTNFGIHRPPRAAHDDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPAPWQGVGPHIMGPPMLLNPAVQHQIMTQAQLFQMYNIIPQNYANGIQPPKVIQASSIFGNTGPEKTVYGNPKDPFMPPPHVLHGVPVKPLKTAPPPTIPQDILDLTCKSSSPPPQKPAVEIVRVPPSPSPTAQNLTKNYTLVDGKAVVGSNLEITLVNKASSPGKNRPPQKRSSNGKFMSAKTPTPPKEPYPKYTSPTTTQKKPPINIPNYQIREDSSPTQSQVLQNAMKNQNLAQIMDLQKNSVPMTSFMDPYVALYSSLAGQMDQRQLAMYRDLMTNQFRYPGLLNLGVATPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00374957;
90% Identity
iTF_00905897;
80% Identity
-