Basic Information

Insect: Lithophane leautieri
Gene Symbol: -
Assembly: GCA_949152455.1
Location: OX424481.1:9560028-9561188[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00014 0.011 16.8 1.9 1 23 152 176 152 176 0.92

2 7 3.4 2.7e+02 3.0 0.2 2 23 182 202 181 202 0.90

3 7 0.00015 0.011 16.8 0.2 2 23 209 229 208 229 0.96

4 7 0.00022 0.017 16.2 1.3 1 23 235 257 235 257 0.99

5 7 6.1e-05 0.0048 18.0 1.7 1 23 263 285 263 285 0.98

6 7 0.00037 0.029 15.5 1.1 1 23 291 314 291 314 0.97

7 7 0.0065 0.51 11.6 0.5 3 23 322 343 320 343 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00014	0.011	16.8	1.9	1	23	152	176	152	176	0.92
2	7	3.4	2.7e+02	3.0	0.2	2	23	182	202	181	202	0.90
3	7	0.00015	0.011	16.8	0.2	2	23	209	229	208	229	0.96
4	7	0.00022	0.017	16.2	1.3	1	23	235	257	235	257	0.99
5	7	6.1e-05	0.0048	18.0	1.7	1	23	263	285	263	285	0.98
6	7	0.00037	0.029	15.5	1.1	1	23	291	314	291	314	0.97
7	7	0.0065	0.51	11.6	0.5	3	23	322	343	320	343	0.95

Sequence Information

Coding Sequence: ATGTCAGGTTCTTACTTTATGCTGCAATTACTGAAAATCGACCACCTACGTAGCATAGAGGTTAAAAAGCACCAGAGAAAATTGCCAAAACAAAGTACTACAACTCGTCAAGACAGTGAAATGAAAACAATCGGGACTactaacaataaatgtaggctTTGTTTAGAAGAAGGTAACAAACCAATTTACAATTCCGAAAGTAATTTTAACATTGCAGAAGCGATATGCACTTTTGCAGATatacaattaaatgaaaatgatgaCTATCCTAAGCACTTGTGTACGAAATGCTATAATTTTCTTCAGAATGCAGTAACATTTAGGAAATCAGCCCAGGACACTGATAAACAACTTCGTCAGACCCCAGCTCGGGATTCTAGAGGAGAATCAGATGCAGGGAATGATCCTGACGATAATAACGGCGACACTGAAGAAGTTGTCCAAAAAGGCAAATACACTTGTAAACTGTGCAGCCTCAATTTCAAAACATCTAAAGACTTAATTGCCCACAAAAGATCGAGAACTCACAAGAAGGTTCGTGTTCGATGCCCCGTGTGCTACAGATTGTTAACAGCTCAATTATACCAGAAGCATGTAGCCAGACATCAATCAGCATCTCACCTTGTTTGTGACATATGCGGGAAACTTTACCGCAAAGATAATTTGGTAAGGCACTTACAGCTTCACAGCTTCGACCTACCATTCAAATGCCAGATGTGTCCATACCGAGGACGCTTCATGGAATCACTAAAAATCCATATGAGAACACACACTGGTGACAAACCTTTTTCATGTGATAAGTGTGAGTTACGGTTTTTAACAAGAAGCAACCTGAACCGACATCTGTTAACCCATAAGAAGGAAAGACCGTTCAAGTGTCTTGAATGCGGAAGAGGTTTTTACACTAAGAGGGATATGGATGTACATTTCAAAACTGATCATGCTGGACTGAGGGAGTTTGGGTGCAAGATGTGTGGCAATAAGTATGGTACTCGGAAGGCATTAATGAGGCATGAACTGAGAGTTCATAAGAGGGATAAGATGGCGAAAGGGCGGATGCCATTGTACCTTCAAGCTGGGTATCAGAAACAAGATGAAGTCATGTCTAGCGTGCTGGTTGCTGTCAAACTGTTGTCAGATACAGCTACAATCCTCAgttaa
Protein Sequence: MSGSYFMLQLLKIDHLRSIEVKKHQRKLPKQSTTTRQDSEMKTIGTTNNKCRLCLEEGNKPIYNSESNFNIAEAICTFADIQLNENDDYPKHLCTKCYNFLQNAVTFRKSAQDTDKQLRQTPARDSRGESDAGNDPDDNNGDTEEVVQKGKYTCKLCSLNFKTSKDLIAHKRSRTHKKVRVRCPVCYRLLTAQLYQKHVARHQSASHLVCDICGKLYRKDNLVRHLQLHSFDLPFKCQMCPYRGRFMESLKIHMRTHTGDKPFSCDKCELRFLTRSNLNRHLLTHKKERPFKCLECGRGFYTKRDMDVHFKTDHAGLREFGCKMCGNKYGTRKALMRHELRVHKRDKMAKGRMPLYLQAGYQKQDEVMSSVLVAVKLLSDTATILS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00831679;
90% Identity: iTF_00907433;
80% Identity: -