Basic Information

Insect: Lithophane leautieri
Gene Symbol: -
Assembly: GCA_949152455.1
Location: OX424484.1:4566557-4569640[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2.6e-05 0.002 19.2 2.9 1 23 307 329 307 329 0.97

2 11 0.00018 0.014 16.5 0.6 1 23 404 427 404 427 0.97

3 11 0.0042 0.33 12.2 2.9 1 23 431 453 431 453 0.98

4 11 0.42 33 5.9 0.8 2 23 475 497 474 497 0.86

5 11 0.0063 0.49 11.6 2.0 1 23 501 524 501 524 0.97

6 11 0.02 1.5 10.1 0.3 2 23 547 569 546 569 0.93

7 11 1.1e-05 0.00089 20.3 2.9 1 23 579 601 579 602 0.96

8 11 0.0059 0.46 11.7 1.1 2 23 618 639 617 639 0.96

9 11 0.0058 0.45 11.8 0.3 1 23 645 667 645 667 0.96

10 11 0.46 36 5.8 2.6 1 22 673 694 673 697 0.90

11 11 0.033 2.5 9.4 0.0 3 23 756 776 754 776 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2.6e-05	0.002	19.2	2.9	1	23	307	329	307	329	0.97
2	11	0.00018	0.014	16.5	0.6	1	23	404	427	404	427	0.97
3	11	0.0042	0.33	12.2	2.9	1	23	431	453	431	453	0.98
4	11	0.42	33	5.9	0.8	2	23	475	497	474	497	0.86
5	11	0.0063	0.49	11.6	2.0	1	23	501	524	501	524	0.97
6	11	0.02	1.5	10.1	0.3	2	23	547	569	546	569	0.93
7	11	1.1e-05	0.00089	20.3	2.9	1	23	579	601	579	602	0.96
8	11	0.0059	0.46	11.7	1.1	2	23	618	639	617	639	0.96
9	11	0.0058	0.45	11.8	0.3	1	23	645	667	645	667	0.96
10	11	0.46	36	5.8	2.6	1	22	673	694	673	697	0.90
11	11	0.033	2.5	9.4	0.0	3	23	756	776	754	776	0.97

Sequence Information

Coding Sequence: ATGGAATCAACAAGCTACCCGACACCATCAGAGATAGCTGACTTACAAACAGACACAATTATAAAAGAAGAAGATGACGTCAACCATCAGGACCATGAAAACACAGAAGACATGGCACTTTATATCAAATCAGAAAACATGGATGATATAGGCACACAAGAACATAATGATGACCCTTTCAGTAATGTACAATTAGAAGTGAAACAGGAAACAATATCCAAATCTATAGAAAAAGAAGATTCTGACTCTCAAAATGAAGACTGTATGTCGAAAATGGACGATTATGATCAAGAATCCAAACACGATTTAGAACATTTCGCAACAGTTCCTAAATCTGAAATGGATTGTGATGAAAAGTCGGAAGTTAAAGAAGAAAGAGTGTTGGGAGATGAGTCTTTGGTGACATATGATTATCCCAATTTTGATGATGATGTTGGCAGTATGGATAGCAATGAGGCGGCCGCGTTGACTCATGTGGAAGCGTGTTTGCAGGATGATATGAACATAAAGTGCGAAGATGATGATGTTGAGCACCATCATAAAGGAGAATACGACAAAATGAATATCAAAGAGGAATCAGAAGTCACAGTAACAGAAACACACTTAATATCAAACAAAGTTATCAACACGACATCCACAATCACAAACCCACACGACGGTCTTATCGAATCTAAAACAACAAAGACTTTAGTGATGGAAATACTTCCCATTCCATTGACCCAAACAAATATGACATTCTCGAAAATAGGAAATCCAGAAGAAATTTTACCAACTACTTACGATAATGCCGCTAACTATATGGACTGCCAAGAGTCTTTCCAACTAAATTCTATTACTGGGAATGTTTTATCCCTCGAACAAGAAGCTTACGGCTTACTCAAAGCTAAAGGAAAAAAGAAAGATGTAGGAGAAACTCTCCATACATGCCCAAAATGCCCCAAAACTTACAGACAGAAGAATTATATGAAAAGGCATTTAGCTGTCCATGATGCTATTGAAAAACGCGCTCAAGGTCACATTAGAAGCCAGATAACTAAGAAAGAGAATAAAAACAAGAAGTTGAAAGCTGAACTTGAGAGTCAGGCtgttaaaaaagaagaaaagctTAAGAAAGAAGGTTATGAATGTACTTGTGGGCAATTGTTTCAAAGACGGAGTCGAATGGAGACCTGTTTGAGGTCCCACAATCTGTTTTGCGACACAAATACTTACCCCTGCGTATCTTGCAATAAACAGTTTAAAGATAAAGAAGAATTAGCTCTCCATCGCAAAAGATTACACAGGAAGAGATTTCCCTGTAAATTCTGTCCTACAGACTATCACACCAGAAAAGAACTCTTCAAACATCTACAAGTCCATCAAAAAGTCCAATTAATGGAGTACAAAGTCATTTCAGAAGTTGTCAAAGGGAAGCAGAAGCTCAAATGCTTCATGTGCCCAAAAAGTTACATTGAGATATCAGACCTAAAGTGTCATGTCATGGATGATCACAAAGAACCGTATAGTTGTCCGAGATGCAAGCGAACATTCTCGAAAATCATCGATTTTGGAAACCACACGAAGACTTTCCACCCGGAAGTCGAAGGACAATCCGTCTTAGATGTTCTAGAAGCCTTCTCGAAATTAGTGAAAGCTTGGAAGTGTGAGGAATGCGGCCTACAGTTTCATGAAGCAGATAAACTAGCCATGCATCAAATCGAAAAGCATAGCCCGGATTTGAAAGCTGAGATGCAGTTTCAGTGCACGGATTGTCGAAGAGTTTTCATCAGTCAGAAAGGACTTACGTCCCATAGACGGATACATCATAGTACCGAAAGCGTAGAGGAGTCTGAACCAGTTGAACAAGGAGTCATGTGTTTAGAATGTCGAAAGATCTGCAAGGATATGAACGCATTAATCTCCCATATGCGGTACCATTCACCAGATCGAAAATACCCTTGTAAATTCTGCGATTTTCGCTTCGCTACGCCCGAAAAGCGGAAAGCGCACGCCGAAATCCACACAGGCGATATGAAATACGTCTGCTTCATCTGTGAATACCAATGCAGTTCAGAAAATCGACTAAAACAACACAAATTATCGCCTAAACATGTTAATATGAAAGAGTTTTTGTTGACTGGAAAGCCGTTGGTACAGGAAGCTGAATCTTCTTCTAAACAGGAGAAAATAAAAGAGACTTTGAAAAAGAAAGAGTGGCAGGTCAAGGAGAAGAAGAAAAAAGAGAAATCGCGAAGTGAGTCGCGTTCGGAGTGTAGTGAAGTGGCTTGTGACATTTGTGGGGACAAGTTCCCGAGTGAGAGTGAGATGTTGGAACATAAACTGACTCACCCTTTCATAGAGTTCCCTAATGAAGATACACCtagtagaatattttttaagtaa
Protein Sequence: MESTSYPTPSEIADLQTDTIIKEEDDVNHQDHENTEDMALYIKSENMDDIGTQEHNDDPFSNVQLEVKQETISKSIEKEDSDSQNEDCMSKMDDYDQESKHDLEHFATVPKSEMDCDEKSEVKEERVLGDESLVTYDYPNFDDDVGSMDSNEAAALTHVEACLQDDMNIKCEDDDVEHHHKGEYDKMNIKEESEVTVTETHLISNKVINTTSTITNPHDGLIESKTTKTLVMEILPIPLTQTNMTFSKIGNPEEILPTTYDNAANYMDCQESFQLNSITGNVLSLEQEAYGLLKAKGKKKDVGETLHTCPKCPKTYRQKNYMKRHLAVHDAIEKRAQGHIRSQITKKENKNKKLKAELESQAVKKEEKLKKEGYECTCGQLFQRRSRMETCLRSHNLFCDTNTYPCVSCNKQFKDKEELALHRKRLHRKRFPCKFCPTDYHTRKELFKHLQVHQKVQLMEYKVISEVVKGKQKLKCFMCPKSYIEISDLKCHVMDDHKEPYSCPRCKRTFSKIIDFGNHTKTFHPEVEGQSVLDVLEAFSKLVKAWKCEECGLQFHEADKLAMHQIEKHSPDLKAEMQFQCTDCRRVFISQKGLTSHRRIHHSTESVEESEPVEQGVMCLECRKICKDMNALISHMRYHSPDRKYPCKFCDFRFATPEKRKAHAEIHTGDMKYVCFICEYQCSSENRLKQHKLSPKHVNMKEFLLTGKPLVQEAESSSKQEKIKETLKKKEWQVKEKKKKEKSRSESRSECSEVACDICGDKFPSESEMLEHKLTHPFIEFPNEDTPSRIFFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00810484;
90% Identity: iTF_01440450;
80% Identity: -