Basic Information

Insect: Lithophane leautieri
Gene Symbol: -
Assembly: GCA_949152455.1
Location: OX424485.1:992251-994281[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0015 0.12 13.6 0.9 2 23 321 343 320 343 0.92

2 10 0.21 16 6.8 1.5 1 23 349 371 349 371 0.98

3 10 7.1 5.5e+02 2.0 4.1 1 23 377 400 377 400 0.95

4 10 0.0028 0.22 12.7 0.1 1 21 405 425 405 426 0.92

5 10 0.0016 0.13 13.5 1.5 2 23 444 465 443 465 0.97

6 10 3.7e-05 0.0029 18.7 1.4 3 23 474 494 473 494 0.97

7 10 0.00082 0.064 14.4 2.7 1 23 500 522 500 522 0.96

8 10 2.5e-05 0.002 19.2 5.6 1 23 528 550 528 550 0.98

9 10 3.6e-05 0.0028 18.7 1.4 2 23 557 578 556 578 0.96

10 10 1.2e-05 0.0009 20.3 1.1 1 23 584 607 584 607 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0015	0.12	13.6	0.9	2	23	321	343	320	343	0.92
2	10	0.21	16	6.8	1.5	1	23	349	371	349	371	0.98
3	10	7.1	5.5e+02	2.0	4.1	1	23	377	400	377	400	0.95
4	10	0.0028	0.22	12.7	0.1	1	21	405	425	405	426	0.92
5	10	0.0016	0.13	13.5	1.5	2	23	444	465	443	465	0.97
6	10	3.7e-05	0.0029	18.7	1.4	3	23	474	494	473	494	0.97
7	10	0.00082	0.064	14.4	2.7	1	23	500	522	500	522	0.96
8	10	2.5e-05	0.002	19.2	5.6	1	23	528	550	528	550	0.98
9	10	3.6e-05	0.0028	18.7	1.4	2	23	557	578	556	578	0.96
10	10	1.2e-05	0.0009	20.3	1.1	1	23	584	607	584	607	0.98

Sequence Information

Coding Sequence: ATGAATACTACAAAAAATGTGTATTGTCGCCTTTGCGCAGAGTTAAAACCACACAATGAACTCACAAACTTACAGACTGACGAAGAAACGTACCAGAAAGTCGTTAATAAACTGTCAAAACTCAACATAATGATGGATTTCCAGgagaatataaatatattacctAAGACTGTCTGCTTAATATGTGTAAAATCCTTAGAAGAAGCATTTGCTTTCGTAACTGCAGTTGAACAGGCGCAGGCATTTTTAAGTGACTTCTGTCAGGGTCAAACAAAAACTGTGAAAAGTGATTCTTATGGTGAAATCACCTTTTATGCACCATCAGATGTTAATAAAGAAGTTATTGATGTTAAAGTCGAAAGCAGTCAGGATCCAATGGACGTaaatgatgacaatgatgaagAATGTGATAATGAGGACAACTGTAATATTTACAACGCTGATGGAAACAATTTAGGTAGCGAAAAAGTTATTATTGAGAATAAGGATACTAGACAATATTCATATGTCATTGTTGAAGAAAACATTGGTATAAAAGATGAAACTGATGAATACACTGctgtaaataatgttaaaaatattgtagatCATTTTAGTAGTGACTGTACAGAGAATCAACACATCAATGTTAGAGGAAATGATTTGAATATCAAAGACACTAAAGTACCCTCTGCTTTGAAAGAAAAACttagaaaagattttttaataacagAACACTGTTCTGAACCAATCCCACCATTAGACAATTCAGTTTATTCTGCAGATAAcatatataaacaaaattatagtTCTGTGGGCACCAAAACTGATGGTTCTGATAATTGGAATATACATAAACCAACCCAAACTAAACTATTGGATACTACAGCATATTCAGaagattacataaataaacaaattaatagatTAAGCACTGTGCCCGTGCAATACCTAAGAATGACTTGGCTGGATTACGAATGGAAGTGTTCTCACTGTGGAACACTATTCTCAAATATTGAAGAGCTACAGAATCATTCAATGCTCTACCACAACATCTGCAACGCTTACCAATGCACagattgtaaaattaaaaagcaacgTCTCAATGCATTCATCAAGCATGTCAGATCACACAGGAAATACTTACATTATTCGTGTTACAAATGCTTTGAGAAATTCCCTAAAATGATGGAAACCATACATCATAAGAAGAAAATCCATGAGAACACTAAACATATTTGCTTGGGATGCAACACTCCTTTTTCAAGTAACACTGAATTAGAAGAACATGTCAAcaagtattataatattctatGGAGACAGAAAACATTTATTAACAGTGACAATTTAACTTGCAGTACATGCAATAAAGCCTGTgcaagcattactgctttgAGGAACCACTTAAACAGGCACAAAGAAAAGAAACGAGACCGTATCTGTGACAGATGTGGCAAATGTTTCGATAGTGAACCAAGTTTAAGAACTCACATGGATACACATATTGAAAAGATTTTATATCATTGTGAAATTTGTAAGACTACCTTCAAAACTGTTTACTCACTACGATACCATGCTAGCATACATTCTGGAATCAAACCGTTCACCTGTGATGTCTGCAGTAAATGTTTTAGAACGAAAAGCCAGATCACAAATCATATGAAATTTCACACAGACTATTTTCCAATTACTTGCTCAGTTTGTAACAAAAAGTTTCGTACAGACacttatttacaaaatcatATGCTTCAGCATACTGGAGAGAAACCATTTTCTTGTGACATTTGTCCGAGAGACTTTACAAACCTGGCTAATCGTAACAAACATATGAGACGTAGACATGGTATCGAGATGGCAAAGAAGAGACAGCCTATTATAAAACAGCAAGCGGCTGATGACTCCATTTCCTCTGACCTGGCTCCTGGAGAGGCTAAATTTGCAGATCTAgacaaaatgaatgaatggaaaaacaaaattatggaaCATCGAAAAAGTCAAAGGGcaaacaacaaaattaaaaaactgaagGTGATTAACAAGGAATGCaactaa
Protein Sequence: MNTTKNVYCRLCAELKPHNELTNLQTDEETYQKVVNKLSKLNIMMDFQENINILPKTVCLICVKSLEEAFAFVTAVEQAQAFLSDFCQGQTKTVKSDSYGEITFYAPSDVNKEVIDVKVESSQDPMDVNDDNDEECDNEDNCNIYNADGNNLGSEKVIIENKDTRQYSYVIVEENIGIKDETDEYTAVNNVKNIVDHFSSDCTENQHINVRGNDLNIKDTKVPSALKEKLRKDFLITEHCSEPIPPLDNSVYSADNIYKQNYSSVGTKTDGSDNWNIHKPTQTKLLDTTAYSEDYINKQINRLSTVPVQYLRMTWLDYEWKCSHCGTLFSNIEELQNHSMLYHNICNAYQCTDCKIKKQRLNAFIKHVRSHRKYLHYSCYKCFEKFPKMMETIHHKKKIHENTKHICLGCNTPFSSNTELEEHVNKYYNILWRQKTFINSDNLTCSTCNKACASITALRNHLNRHKEKKRDRICDRCGKCFDSEPSLRTHMDTHIEKILYHCEICKTTFKTVYSLRYHASIHSGIKPFTCDVCSKCFRTKSQITNHMKFHTDYFPITCSVCNKKFRTDTYLQNHMLQHTGEKPFSCDICPRDFTNLANRNKHMRRRHGIEMAKKRQPIIKQQAADDSISSDLAPGEAKFADLDKMNEWKNKIMEHRKSQRANNKIKKLKVINKECN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00037202;
90% Identity: iTF_00907348;
80% Identity: -