Basic Information

Insect: Lithophane leautieri
Gene Symbol: -
Assembly: GCA_949152455.1
Location: OX424476.1:13630919-13646666[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.002 0.16 13.2 2.6 3 23 242 262 240 262 0.97

2 11 0.15 11 7.3 9.4 1 23 268 290 268 290 0.95

3 11 4.4e-05 0.0034 18.4 5.8 1 23 296 318 296 318 0.98

4 11 0.00039 0.031 15.4 1.5 1 23 324 346 324 346 0.97

5 11 8.1e-06 0.00063 20.7 0.9 1 23 352 374 352 374 0.97

6 11 1.8e-06 0.00014 22.8 0.1 1 23 380 402 380 402 0.98

7 11 6.3e-05 0.0049 17.9 0.4 1 23 407 429 407 429 0.96

8 11 0.6 47 5.4 3.6 3 19 437 453 436 459 0.90

9 11 3.1e-05 0.0024 18.9 0.4 1 23 555 577 555 577 0.97

10 11 8.1e-05 0.0063 17.6 1.4 1 23 646 668 646 668 0.96

11 11 3.3e-05 0.0026 18.8 4.3 1 23 678 700 678 700 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.002	0.16	13.2	2.6	3	23	242	262	240	262	0.97
2	11	0.15	11	7.3	9.4	1	23	268	290	268	290	0.95
3	11	4.4e-05	0.0034	18.4	5.8	1	23	296	318	296	318	0.98
4	11	0.00039	0.031	15.4	1.5	1	23	324	346	324	346	0.97
5	11	8.1e-06	0.00063	20.7	0.9	1	23	352	374	352	374	0.97
6	11	1.8e-06	0.00014	22.8	0.1	1	23	380	402	380	402	0.98
7	11	6.3e-05	0.0049	17.9	0.4	1	23	407	429	407	429	0.96
8	11	0.6	47	5.4	3.6	3	19	437	453	436	459	0.90
9	11	3.1e-05	0.0024	18.9	0.4	1	23	555	577	555	577	0.97
10	11	8.1e-05	0.0063	17.6	1.4	1	23	646	668	646	668	0.96
11	11	3.3e-05	0.0026	18.8	4.3	1	23	678	700	678	700	0.97

Sequence Information

Coding Sequence: aTGTGTATGCCAACTCCTAACAATGTTTCGGGCTTCGGTTACTCGTGGGGCTTCACGAGTTCTGCGGACCTTACGAAGGGTGAGGTGGAAACACCGAGTAGTCTGAGCTATACTTTGGGAAATACGGTTTCCCCAGAAACGACACTGACTGTTATGTCCCACAAGACACCACAAGTGCAAGAAAAAGTGGGTGCAGTCACAGTAGCAGTCTCAAACGCAGGTGCACAACTGACGAGAGTGGTAACTACAGGCACACCGGTCTCTGGAAGACGGATGTTTGTAGTGAACGATGCCGCTGCGCATACGTTGAACAGGGTGTCGCAGCAGAATCAGACCACTACTATACATACGAACTTAGCAGCTAAGCCGTTTATGACACCAATAGGTCCCATCCAGTTAACGGCGGAAGAATGCAACGAGATTTTGATGAAGCGGGCTCTTCAGGCTCAAGGCATCGCGACCCCGGTCATAGACGCTTCGCAACTCAACCACACGTTACTAAACGGGGGCCTGAAGAGTCTAGCGGAGGCGACGGCTCAGCAGACGCAGGCGGAAACCATTCAGACGACTACAGTACATCAGCATCATTTGTTACATACAAAACAGGAGCCGGGGACTACGAATAATTCGCCCAAGACGGTATATTCGCAGACGGAGCTGATGAATACCAACTCGGTGATGACGACGGCACCGCCCGCCGCGGTGAAGGAGCGCCCTTACGGCTGCGACGAGTGTGGCAAGTCCTTCTTGCTCAAACATCATCTTACGACGCATGCGAGAGTTCATACAGGTGAGCGACCGCACGCGTGCGTTCACTGCGCCAAGACATTCGCGCACAAGCATTGCCTCAACACCCACCTCTTACTGCACACTTCTAACCGCCCGTACCGCTGCCCCGAATGCAAGAAAACCTTCACGCTCAAACACCACCTACTCACACACTCAcggGTACATAGTCGAGAGCGTCCCTTCGTATGTAACGAGTGCGGTCGCGGGTTCCCTCTGAAGCGACACCTGGTGACGCACAGCAAGTACCACGCGGGCGAGCGGCCCTACGTCTGTAGCGATTGTGGAGAGAGCTTCGCGCAGAAGGAGCACCTAGTGATGCACAGTCGTTTCCACGGCTCCCTCTCCCCCTACGTGTGTCCGGACTGCGGCGTGACGTTTGCACGCAAGTTCCAACTCGTGAACCACGGGCGAGTGCACGGGAGAGTGCCTCACGCGTGTCCCGTGTGCGGCAAGGAGTTCCTACAGAAGAGAACACTAGTCGCGCATATGAAAATACATACAGGGGAAGGTGCAGTTGCATGTTTAGAATGCGGCGAAGCCTTCAAATGCAAGTCAGAGTTGCAGCAACATTGCAAAATGACACGGCACTGTCTACAATCCACGCAGTCTcaacaacagcaacaacaacaacagcaacaacaacagcaacagcAGCAGCAACAACAACAGCAACAACAAGCGCAACAACAAGCACAACAACAGGCGCAACAACAAGCACAGCAACAAGCGCAGCAACAagcacaacaacaacagcaacaacaacaacaacagcaacaacaaGCAACTGTGATAAAACAAGATGATTTTAAACCACAAATTGTACAGGTTATTGGTGCCGACGGTCAAATAGTATCGGAGAAGACGACGCCGGGATATGCGTGTCCAGAGTGTGGTTCCTGTTTCAATACCAAGGAGGCGCTGTCCCTGCACGTGCGCCTGCACGCGGGCGACCGCACGTGCGTCACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCCCGGCCTCGTCGCCGCCGCGCACACGCAGCACAGTTTCATTATTCCAGATCAGCCTAATATACAGATAATTTCGTCGAACGCTAACAACGTTGGCCATGCGCAAGTTATAGCGGCGAATCATCAAATATCAGCTCCCAGACCGAAGGTTCACTTTTGTGGCGATTGTGGGAAAGGGTTCGCGGCTAAACATGGTTTATTGGCGCATCAAAGAAGACATCCTGACGGCAGCTGTACATTACGTACCCACGTATGCGATCAGTGTGGCAAGGCATTCTTCCAGAAGAACCACCTCATGCTGCATCAGAGACAACACATGGACCTGCCACCCCGAAGTGTAAGCAAATACCCTAACCTTTACGCCTCTGCCCCCGCCAAGGTAAGCAGAGATGTATGCAACATATACACGGTGGAAGGGACATCCTAA
Protein Sequence: MCMPTPNNVSGFGYSWGFTSSADLTKGEVETPSSLSYTLGNTVSPETTLTVMSHKTPQVQEKVGAVTVAVSNAGAQLTRVVTTGTPVSGRRMFVVNDAAAHTLNRVSQQNQTTTIHTNLAAKPFMTPIGPIQLTAEECNEILMKRALQAQGIATPVIDASQLNHTLLNGGLKSLAEATAQQTQAETIQTTTVHQHHLLHTKQEPGTTNNSPKTVYSQTELMNTNSVMTTAPPAAVKERPYGCDECGKSFLLKHHLTTHARVHTGERPHACVHCAKTFAHKHCLNTHLLLHTSNRPYRCPECKKTFTLKHHLLTHSRVHSRERPFVCNECGRGFPLKRHLVTHSKYHAGERPYVCSDCGESFAQKEHLVMHSRFHGSLSPYVCPDCGVTFARKFQLVNHGRVHGRVPHACPVCGKEFLQKRTLVAHMKIHTGEGAVACLECGEAFKCKSELQQHCKMTRHCLQSTQSQQQQQQQQQQQQQQQQQQQQQQQAQQQAQQQAQQQAQQQAQQQAQQQQQQQQQQQQQATVIKQDDFKPQIVQVIGADGQIVSEKTTPGYACPECGSCFNTKEALSLHVRLHAGDRTCVTDLCALTAALQPGLVAAAHTQHSFIIPDQPNIQIISSNANNVGHAQVIAANHQISAPRPKVHFCGDCGKGFAAKHGLLAHQRRHPDGSCTLRTHVCDQCGKAFFQKNHLMLHQRQHMDLPPRSVSKYPNLYASAPAKVSRDVCNIYTVEGTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01063076;
90% Identity: iTF_01527636;
80% Identity: -