Llea014041.1
Basic Information
- Insect
- Lithophane leautieri
- Gene Symbol
- -
- Assembly
- GCA_949152455.1
- Location
- OX424471.1:12787475-12787948[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-08 1.1e-05 25.7 0.1 14 39 28 52 22 56 0.89 2 2 0.34 1.9e+02 2.6 0.0 21 38 108 125 107 129 0.84
Sequence Information
- Coding Sequence
- ATGCCCAGACAACGTATCAAAACAACTTCAAGAGGCGGGTGTGATATAACTCAGTACGAAAATGCGTATGGAGAAGTCAAAAAAGGGACTTCTTTACGAAAAGCTGCAAAGATGTACGGAGTTCACCATTCTTCTCTTCTGCGATACAAGAAAACAGATGCAGCGATCGAAGAAGGTAACCAGGCTGATGTTAGTATGGGGTATGTAGCCCACAACCGAGTATTTACCCCTGACCAGGaatttaaactgtcaaaatatttGATCCGCTATGCGAATATTTACTTTGGTCTATCTGTCAAGGAAGTAAGAAAATTAGCATTCCAGCTCGCtgtcaaatataatttaaacacaCCTTCTATGTGGAACAAAAATCAGGTTGCTGGAGAAGAGTGGTTTCGCTCTTTTATGAGAAGAAATGTGGAATTGTCGGATGACAGCAGCTGCTGTTCAGCTTGTTTTTGTTCCTACAGATAA
- Protein Sequence
- MPRQRIKTTSRGGCDITQYENAYGEVKKGTSLRKAAKMYGVHHSSLLRYKKTDAAIEEGNQADVSMGYVAHNRVFTPDQEFKLSKYLIRYANIYFGLSVKEVRKLAFQLAVKYNLNTPSMWNKNQVAGEEWFRSFMRRNVELSDDSSCCSACFCSYR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00906073;
- 90% Identity
- iTF_01027245;
- 80% Identity
- -