Llea011059.1
Basic Information
- Insect
- Lithophane leautieri
- Gene Symbol
- -
- Assembly
- GCA_949152455.1
- Location
- OX424468.1:10280574-10282430[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-10 3.6e-07 30.5 0.0 4 40 21 57 18 61 0.92
Sequence Information
- Coding Sequence
- ATGCCTCGAACATATAAAAAACTCCTTGGAAgcagaaattataaaaactacGCAGAGTCCAAACTAGAAGACGCAGTGCAGGCAATTGCTAATGGAAGTGTATCTATTCGGGGAGCCGCAGAACAGTTTGATATTCCGTATGGACCACTATACAACAGGTATCATggaaaacatattaaaaaaccaGGTGCTCAGCCTGTTTTCTCTGAAGCACAAGAGAAAGCAATACTTCAGGCTGCAGCTAAATGTGCAGATTTTGGTTTTCCGTTGAGTCTTTTAGATTTAAGAATGATCGCCGAATCTTTTTTAGACAGAATGGGCCGTACAGTGGCAAAATTCCCAAATAATGTACCAGGCGTAGATTGGGCATACTCTGTGCTAAAGCGCCACAAAGAAAATTATAGCCAACGTGTTGCAGCTAACATAAAGCGGGCACGAGCGCAGGTTTCTAGAGAAACTATAAAAGAATACTTTCAAAATTTAGAGCCTACTATAAAAGACGTGCCGAGTagcaacatttttaattatgatgAGTCCAATTTAAGTGACGACCCTGGTAAAAAGCGATACATTTATCGAAGAGGGATAAAGTACCCTGAAAAAATAACGAACTTTTCTAAAAGTTCCACAAGTGTCATGATGTGTGGGTCTGCAGATGGAGTACTTTTACCGCCTTACGTCATTTATAAAAGCACCCATCTATACAACACTTGGAAAGAAAATGGACCTCGTGGGCCGCCTTGTTGTGATGAACCATGTTGCTCCCGCGGTACCAGATATAACAGAACTGCAAGCGGCTGGTTCGATTCTGTTACATTTCGCGATTGGTTTATGACATGTTTTTTGCCACATGCAAAAAGACTGAATGGACGCAAAGTTATGATTGGCGATAATTTGTCATCGCATTTGGATGATGACGTTTTACGCACATGTGAAGAAAATAACATCTCCTTCGTCTGCCTGGTGCCAAATTCAACGCATCTACTCGTACTTCAGCCGCTAGATGTTGCTTTCTTTCGGCCCATGAAGGAAGCCTGGCGTTTTGTACTAACTAAATGGAAATTCGAGAATACGAGACTGACCACCATTCCAAAGGATGCTTTTCCAAATCTTCTTAATAAGGCACTAATAAGAATGAATGAAACTAAACCGAAACAGCCTCAACACTCTTCAACGCCATCACTAAATATAACATCTGCAATTAAACGAAATCTAACCAAGTCTTTTGATGTCACTGACATATTTCCATTTAATCCGGATCAAGTTTTTAAGCGCTTGCCACCTGATGACAATAACGTTGTCGAACAATCTGAAAGTGTTCTCACAGAATTATTAAAAGATCAGAGATTTGGAGGACCATCACATAGcattagaaagaaaaagagaCTCGATGTGGATCCTGGTAAAAGTATTTCGGCAGACAAAGATGAATGCAGTACATCTCAGGAAAATTTAGGAATTGAAAGACGAAGGAAAccaaccaataaaaaatatagggaTATACTGTCCAGTGAGAAAGAGGACAGTGACACCATCATAAACTCGTCTCCTTTGCCAAGAGAAGAGGAAGATAATGAATTGGCTGAGGAGCGATATTTACTAGCCAAGTTTTATTCTGGTCGTGGTAAAAAAACATATCGTTATGTTTGTCGCATCATCCAAATTACACCCTTAGTTGTGGTTGGGTTAAAATCtgtccaaaataaaaaaacatttaagctGATTCCAGATGACATATCTGATATAGAAATTTCAAACGTTGTGGCATATTTGCCTAAACCTATTATAAAGACTGATGCAAAAGGGGACGAACTGTTTGTGTTTCCTTACGAAGTTAATATCTGTGAACTCAATTAG
- Protein Sequence
- MPRTYKKLLGSRNYKNYAESKLEDAVQAIANGSVSIRGAAEQFDIPYGPLYNRYHGKHIKKPGAQPVFSEAQEKAILQAAAKCADFGFPLSLLDLRMIAESFLDRMGRTVAKFPNNVPGVDWAYSVLKRHKENYSQRVAANIKRARAQVSRETIKEYFQNLEPTIKDVPSSNIFNYDESNLSDDPGKKRYIYRRGIKYPEKITNFSKSSTSVMMCGSADGVLLPPYVIYKSTHLYNTWKENGPRGPPCCDEPCCSRGTRYNRTASGWFDSVTFRDWFMTCFLPHAKRLNGRKVMIGDNLSSHLDDDVLRTCEENNISFVCLVPNSTHLLVLQPLDVAFFRPMKEAWRFVLTKWKFENTRLTTIPKDAFPNLLNKALIRMNETKPKQPQHSSTPSLNITSAIKRNLTKSFDVTDIFPFNPDQVFKRLPPDDNNVVEQSESVLTELLKDQRFGGPSHSIRKKKRLDVDPGKSISADKDECSTSQENLGIERRRKPTNKKYRDILSSEKEDSDTIINSSPLPREEEDNELAEERYLLAKFYSGRGKKTYRYVCRIIQITPLVVVGLKSVQNKKTFKLIPDDISDIEISNVVAYLPKPIIKTDAKGDELFVFPYEVNICELN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01260033; iTF_00667305; iTF_00049836; iTF_01246775; iTF_00049830; iTF_01246765; iTF_01246749; iTF_01246750; iTF_01246751;
- 90% Identity
- iTF_00049830;
- 80% Identity
- -