Llea012794.1
Basic Information
- Insect
- Lithophane leautieri
- Gene Symbol
- -
- Assembly
- GCA_949152455.1
- Location
- OX424470.1:3834649-3838690[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-10 1.6e-07 31.6 0.0 1 38 3 40 3 47 0.90
Sequence Information
- Coding Sequence
- ATGTGGACGGAAGAAAATTTACGCGGGGCAATGGCGGCCGTTGTCCGGGATAACATGACACAGCGCGCTGCAGCAGATCTATATGGCATTCCTAGGCAAACACTAGCTGATCACCTATCAAAGGGAAGCATCGTAAAACGAATGGGTCGACATTCTATTATGAATGAAGCTCATGAAGCTTTCCTCGTGAACAGGATAATGAAACTTACTAATAGTGACGACTTAGTGCAGTGCGTGCCCACGAAAAAGGGACACCAAATCTTGTTTAAAGGTTACACTTACGTTTTTAAAAGTAGGTTGCAGTGTGGAGCTGAGCAGTGGATTTGCTCGTCCCGACAGAAAACTGGTTGCATATCTGTTATTAATATGCAAACATACGGCGTCGAAGTGGTCAGGGATTTCCACAACCACAAGAAACCAATGTTCTCTGATTAG
- Protein Sequence
- MWTEENLRGAMAAVVRDNMTQRAAADLYGIPRQTLADHLSKGSIVKRMGRHSIMNEAHEAFLVNRIMKLTNSDDLVQCVPTKKGHQILFKGYTYVFKSRLQCGAEQWICSSRQKTGCISVINMQTYGVEVVRDFHNHKKPMFSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01093962;
- 90% Identity
- iTF_01093962;
- 80% Identity
- -