Basic Information

Gene Symbol
kn
Assembly
GCA_949152455.1
Location
OX424469.1:11957041-11969512[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-144 1.5e-140 470.0 0.0 178 387 8 225 4 229 0.98
2 2 1.1e-08 8.3e-05 21.8 1.3 420 468 234 284 226 329 0.83

Sequence Information

Coding Sequence
aTGAAACTGTTGGAAGACATATTGAGTTTCGACAAGTTTTTCTTAAAGTTCTTCCTGAAATGCAACCAGAACTGTTTGAAGAATGCAGGGAACCCTAGAGATATGAGAAGGTTTCAGGTGGTAATATCAACTCAAGTGATGGTCGACGGTCCTCTCCTAGCGATATCAGACAATATGTTTGTCCACAATAACAGCAAGCATGGCCGGAGGGCAAAGCGGCTAGACCCTAGTGAAGGTTTGTATCCTCCTCTGCCAGTAGCCACACCATGCATCAAGGCGATATCACCGAGCGAAGGCTGGACGTCTGGAGGGTCGACAGTAATCATAGTAGGGGACAACTTCTTCGACGGACTACAAGTTGTATTTGGAACCATGTTGGTCTGGAGTGAGTTAATAACATCGCACGCGATAAGAGTGCAGACCCCTCCGCGACACATACCGGGCGTTGTAGAGGTAACGCTTTCCTACAAGAGCAAGCAGTTCTGTAAGGGCGCGCCAGGGAgatttgtttatgtttCAGCCTTGAATGAGCCAACGATAGATTACGGCTTTCAGAGGCTACAGAAACTTATACCAAGACATCCCGGGGACCCGGAAAAATTACCtaagGAAATAATTCTAAAACGAGCGGCGGACTTGGCGGAAGCACTGTACTCGATGCCTCGCAACAACCAACTGGGGCTGGGCGCTCCTAGATCGCCCCCTGCTAGCATGCCATTCAACTCGTATACAGGACAACTAGCTGTTAGCGTGCAGGATACTGCGGCCTCGCAGTGGACTGAAGAGGAGTACGCGCGCAGTGGCGGTTCGGTATCGCCGCGGTACTGCTCTGCCGCGTCGACGCCGCATGCCGCGCCCGCAGCCTACCCACATCCACAACACTATCCTGCTCCGCCGACCTCACTCTTCAATACCACGTCTCTGTCTCTAGGACCGTACCATCCGGCGAACATGAATGGACACTTATCATCTGACCGTCACTATAACGCGTATAACACGAAAGATAGCGGACATTACAGTGAAAGAAATGGGAATTCTAAAAGCCTGGCCGACTGTCCGGTAAACATTCATACAAAATGCACTGGCAGCGATATGAAAGGGGCTCAGAATAAAGAGAGAATGGGCGGCCTAGTATCATCTCCGTTCAGTGTCAACCCGTTCTCGCTACCAACTTGCAGCGCTCAACAATATGCTCAGACGGCCCCGCTTGCTTCCAAATAG
Protein Sequence
MKLLEDILSFDKFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPAAYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHLSSDRHYNAYNTKDSGHYSERNGNSKSLADCPVNIHTKCTGSDMKGAQNKERMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_00176893;
80% Identity
-