Basic Information

Insect: Listrodromus nycthemerus
Gene Symbol: ZNF275
Assembly: GCA_963978505.1
Location: OZ021682.1:11916480-11920175[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00078 0.056 13.8 0.7 1 23 168 191 168 191 0.92

2 9 0.71 51 4.5 2.0 1 23 252 275 252 275 0.93

3 9 0.067 4.8 7.8 1.3 1 23 409 432 409 432 0.95

4 9 4.9e-08 3.5e-06 27.1 2.5 1 23 438 460 438 460 0.97

5 9 5e-05 0.0036 17.6 1.2 2 23 476 498 475 498 0.94

6 9 3.4e-05 0.0024 18.1 0.7 1 23 504 526 504 526 0.98

7 9 0.00064 0.046 14.1 2.6 1 23 532 554 532 554 0.98

8 9 0.00018 0.013 15.9 2.3 1 23 560 583 560 583 0.98

9 9 0.4 29 5.3 0.2 1 21 590 610 590 612 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00078	0.056	13.8	0.7	1	23	168	191	168	191	0.92
2	9	0.71	51	4.5	2.0	1	23	252	275	252	275	0.93
3	9	0.067	4.8	7.8	1.3	1	23	409	432	409	432	0.95
4	9	4.9e-08	3.5e-06	27.1	2.5	1	23	438	460	438	460	0.97
5	9	5e-05	0.0036	17.6	1.2	2	23	476	498	475	498	0.94
6	9	3.4e-05	0.0024	18.1	0.7	1	23	504	526	504	526	0.98
7	9	0.00064	0.046	14.1	2.6	1	23	532	554	532	554	0.98
8	9	0.00018	0.013	15.9	2.3	1	23	560	583	560	583	0.98
9	9	0.4	29	5.3	0.2	1	21	590	610	590	612	0.87

Sequence Information

Coding Sequence: ATGAGTGCTGATCCAGATACTGCAAACCCTTCATTACTGAGCTACGAGATAAACGGCACGCAGTTTATCGTACAGTCTTTAGGAAGCACACCGGAGAATTTTGTCAGTCTGAGCGAGCCTGAGGATGGCGAAGGCATTGTCAGATTTGTTGAGCAGATAGCGGATGACAAGGAAGACGTTGAGTCGATTCCGCTTGTGTGCCTGGATGGTCAGGTTTATGCCATTCGTAATGGAGCACTCCAGGCATTGGACATAAGTCAACTCGAGTATGAAAATGTGATAGGCTCAACTCAGGGAAAAGCCCTTGTTCTATCTGAAGATCCAGAAGAGGATGAGGCTGACTGTGTCGAAATAACGCGATACGTGTCTGATAGTGATGCATCGATAGCTCAGGaggacgagagcgaggaacTCGAAATCGTGCccgacgagaacgagcgactcttcgtcgtcgctAAGGACGACGTGAACGCTGACGACTTCGCTGAAGTGGTCACTGCATTCAAATGCAAAATATGCCCGTACACAACTCAAGACAGAGAACAACTGATCAAGCACTTTGAGAATGTGCACGCAAATCCCGCAACTAAGGCAAGTAAAATTATGTCCGACTCTGTTCGGAAGTCTGATCCGGTTCTGCAGAGCCCAaccaaaaattgttggaataCTTccagaattaattatttcaacaaGATTTTGATTCTGCAGGTGCAAGCCGATGAGACTGAAAACGCTGAGGAAGTCAAACTGATGTACATGTGCGGCGAATGCTCAAATTGCTTTCCATCTATGGAAGATTGCAGGGAACACATGATACAAGACCATCAATTGATGGATCGGGGAGGCGACAAGGGCGAAAATAAACCTACCGACGATGCGAGGAAGACCATGCAGCTGAATTTTAAGCCCAGCATTTTGGGTGCGCGGCGTCTAAAATCACCGACGTTAGATGAGAAAATCGTCGCTTCGAAACCTCAAAGCGCGCCTTgtaatcggaacaaaaaaaattcggaattgAACGATCGAAATGTCAAATGCACCTATCGGGGATGTTTTTACAAGTTCATGTCAGACATAAAGATGCAGCAACACGCTGTTTGCCATGTGGACGTGCCGTATCATGCGAATGTCTTTAAGTGCAACATATGCCGGGACGTTAAGTTTCCGAAGTGGAAACCCTGCAGTCTACATCTCTGGAAGAAACATCAGATCGACGTCGATCTTTTCTCTTGTAAGGTTTGTAAACTATACAAGAGCACGACGTTGGTGAAGTTGCTGACGCATATGAGGGTTCACAGTGACAATCGTGAATTCGAGTGCCCGGAGTGCGGCAAGTGTTTCAAGCAGTCGAGCCAGTTGCGAAATCATCGGGTCATGCATCTCGATCGCAAAGCGTCGGAAGTGCCGCGCTGGTACACATCGAAGACATGCGATCTCTGCGGCAAAACATACGCGGATTCCAAATGTCTGAAGAATCATATACAAGCTGTACACTCGAAGTTAAGGCCGTACGTTTGTAACGTGTGCGGTCACTCGAGCGCGAGAAAAGCAATGCTGCAGATGCATCTTCGACAGCACACGGGCGATAAACCTTTCAACTGCGAGCTCTGCGACTATAAGACTGGTGATCACAATTCCCTGCGCCGCCACATGATGAGACATACCGGTGTTAGGCCATACAAATGTCCGCACTGTCCGTACTCGGCAATACAGAGCAACAGCTATAAAAATCACCTTAGATCGAAGCATCCGCTTTTATCGGGTCTGTTCGTTTGCGAGCTGTGCCCGTTCAAGACGGTCAAAAACGAAAGTTATTTGCAACACGTTGGAGATCATCAGAAGGGGCTTATTAAAACCATCGCGCCGAAGAAAGatGGTGAAAACGTTGAAGTATTTCCTGGAAACATAGCAGCAGCACAGTTAATCTACAGCTGTCTCGGGGCGTATTCGAAAGTCGGAAAAACGATAGAAGCCAGTCTGATGTCGTCCTCGACATCGGCAGACGGTACTTCGCAAACTATCACAATTCAAATACCATCAAAGCACCTGGAAGGATCACTGCCGATAAGTGAAAGTGCAACGAAGAACAATTCGGCTATAGAACAAGAGGACGACGAAACTATGCATTGTTTTCTGAAAATACCGcgagaagaggaggaaaacATAGACACCGGTGGTATAACTATTCCTGCCGAACCGGAGGAAGAAAGTACCACTCAGATCGTCGTCGACTCTTGA
Protein Sequence: MSADPDTANPSLLSYEINGTQFIVQSLGSTPENFVSLSEPEDGEGIVRFVEQIADDKEDVESIPLVCLDGQVYAIRNGALQALDISQLEYENVIGSTQGKALVLSEDPEEDEADCVEITRYVSDSDASIAQEDESEELEIVPDENERLFVVAKDDVNADDFAEVVTAFKCKICPYTTQDREQLIKHFENVHANPATKASKIMSDSVRKSDPVLQSPTKNCWNTSRINYFNKILILQVQADETENAEEVKLMYMCGECSNCFPSMEDCREHMIQDHQLMDRGGDKGENKPTDDARKTMQLNFKPSILGARRLKSPTLDEKIVASKPQSAPCNRNKKNSELNDRNVKCTYRGCFYKFMSDIKMQQHAVCHVDVPYHANVFKCNICRDVKFPKWKPCSLHLWKKHQIDVDLFSCKVCKLYKSTTLVKLLTHMRVHSDNREFECPECGKCFKQSSQLRNHRVMHLDRKASEVPRWYTSKTCDLCGKTYADSKCLKNHIQAVHSKLRPYVCNVCGHSSARKAMLQMHLRQHTGDKPFNCELCDYKTGDHNSLRRHMMRHTGVRPYKCPHCPYSAIQSNSYKNHLRSKHPLLSGLFVCELCPFKTVKNESYLQHVGDHQKGLIKTIAPKKDGENVEVFPGNIAAAQLIYSCLGAYSKVGKTIEASLMSSSTSADGTSQTITIQIPSKHLEGSLPISESATKNNSAIEQEDDETMHCFLKIPREEEENIDTGGITIPAEPEEESTTQIVVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01364929;
90% Identity: iTF_01364929;
80% Identity: -