Basic Information

Insect: Listrodromus nycthemerus
Gene Symbol: ECU06_1150
Assembly: GCA_963978505.1
Location: OZ021682.1:731490-737502[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 3.8 2.8e+02 2.2 1.9 2 23 340 361 339 361 0.95

2 27 3.1e-05 0.0023 18.2 0.8 1 23 371 393 371 393 0.99

3 27 3.3e-06 0.00024 21.3 1.1 1 23 399 422 399 422 0.95

4 27 1.4e-05 0.00099 19.4 0.6 1 23 428 450 428 450 0.98

5 27 0.00077 0.055 13.9 4.3 1 23 456 478 456 478 0.96

6 27 0.0044 0.32 11.5 2.9 1 23 484 506 484 506 0.96

7 27 0.00098 0.071 13.5 1.4 1 23 512 534 512 534 0.98

8 27 9.6e-05 0.0069 16.7 0.4 2 20 611 629 610 631 0.93

9 27 0.044 3.2 8.3 5.3 1 23 692 714 692 715 0.93

10 27 0.00066 0.047 14.1 1.3 1 23 748 770 748 770 0.98

11 27 2.2e-05 0.0016 18.7 1.6 1 23 776 799 776 799 0.97

12 27 5.5e-06 0.00039 20.6 0.4 1 23 805 827 805 827 0.98

13 27 5.4e-07 3.9e-05 23.8 0.6 1 23 833 855 833 855 0.98

14 27 0.00028 0.02 15.3 0.5 1 23 861 883 861 883 0.98

15 27 3.2e-05 0.0023 18.2 1.0 1 23 889 911 889 911 0.96

16 27 4.3e-05 0.0031 17.8 1.7 1 23 978 1000 978 1000 0.99

17 27 5.6e-05 0.004 17.4 3.5 1 23 1006 1029 1006 1029 0.96

18 27 0.16 12 6.6 0.2 1 23 1035 1057 1035 1057 0.97

19 27 9.4e-06 0.00068 19.9 2.9 1 23 1063 1085 1063 1085 0.97

20 27 8.5e-06 0.00061 20.0 1.9 1 23 1091 1113 1091 1113 0.97

21 27 2.4e-05 0.0017 18.6 2.3 1 23 1265 1287 1265 1287 0.98

22 27 0.0035 0.25 11.8 6.1 1 23 1293 1316 1293 1316 0.96

23 27 0.00015 0.011 16.1 1.1 1 23 1322 1345 1322 1345 0.97

24 27 2.6e-06 0.00019 21.6 1.3 1 23 1351 1373 1351 1373 0.98

25 27 0.013 0.94 10.0 2.1 1 23 1379 1401 1379 1401 0.94

26 27 1.4e-05 0.001 19.3 3.7 1 23 1407 1429 1407 1429 0.98

27 27 0.00019 0.014 15.8 1.1 1 23 1435 1458 1435 1458 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	3.8	2.8e+02	2.2	1.9	2	23	340	361	339	361	0.95
2	27	3.1e-05	0.0023	18.2	0.8	1	23	371	393	371	393	0.99
3	27	3.3e-06	0.00024	21.3	1.1	1	23	399	422	399	422	0.95
4	27	1.4e-05	0.00099	19.4	0.6	1	23	428	450	428	450	0.98
5	27	0.00077	0.055	13.9	4.3	1	23	456	478	456	478	0.96
6	27	0.0044	0.32	11.5	2.9	1	23	484	506	484	506	0.96
7	27	0.00098	0.071	13.5	1.4	1	23	512	534	512	534	0.98
8	27	9.6e-05	0.0069	16.7	0.4	2	20	611	629	610	631	0.93
9	27	0.044	3.2	8.3	5.3	1	23	692	714	692	715	0.93
10	27	0.00066	0.047	14.1	1.3	1	23	748	770	748	770	0.98
11	27	2.2e-05	0.0016	18.7	1.6	1	23	776	799	776	799	0.97
12	27	5.5e-06	0.00039	20.6	0.4	1	23	805	827	805	827	0.98
13	27	5.4e-07	3.9e-05	23.8	0.6	1	23	833	855	833	855	0.98
14	27	0.00028	0.02	15.3	0.5	1	23	861	883	861	883	0.98
15	27	3.2e-05	0.0023	18.2	1.0	1	23	889	911	889	911	0.96
16	27	4.3e-05	0.0031	17.8	1.7	1	23	978	1000	978	1000	0.99
17	27	5.6e-05	0.004	17.4	3.5	1	23	1006	1029	1006	1029	0.96
18	27	0.16	12	6.6	0.2	1	23	1035	1057	1035	1057	0.97
19	27	9.4e-06	0.00068	19.9	2.9	1	23	1063	1085	1063	1085	0.97
20	27	8.5e-06	0.00061	20.0	1.9	1	23	1091	1113	1091	1113	0.97
21	27	2.4e-05	0.0017	18.6	2.3	1	23	1265	1287	1265	1287	0.98
22	27	0.0035	0.25	11.8	6.1	1	23	1293	1316	1293	1316	0.96
23	27	0.00015	0.011	16.1	1.1	1	23	1322	1345	1322	1345	0.97
24	27	2.6e-06	0.00019	21.6	1.3	1	23	1351	1373	1351	1373	0.98
25	27	0.013	0.94	10.0	2.1	1	23	1379	1401	1379	1401	0.94
26	27	1.4e-05	0.001	19.3	3.7	1	23	1407	1429	1407	1429	0.98
27	27	0.00019	0.014	15.8	1.1	1	23	1435	1458	1435	1458	0.96

Sequence Information

Coding Sequence: ATGGAGACAGGAAAACCTGCAACGTTTGAACTATCCGAGAAAACACTGTTGCGCGGCACATTGAATTGCGAAAATGTGGACGACGACgcgaaccaaaaaaattcagatagcATTGAGACATCCACGGAAAATCGTGAATATCCGGAGTCAAAGGAGAAGCGCTCTGTTTGGTCTGAGATCTGCAGAGTATGCGCCAATCAAAATGTTCATGTCGTCCCTATATTCGAGGGCGAAGGGTTCGAACACGATTTGTGcacgaaaattcacaaataccTTCCAATtcagGTGTCGAAAGATGACACTTTGCCGGTACAGCTCTGCTACCAGTGCGCAGCTACGATACTGGCATGGCACGAGCTACTTGAAGGTTGTACAGAAGCAGAGAAAAGACTCATCCAGATGCAATCCAAGCTCAAAGACAATAAACAAATGCATTTGGAGCATACAGAAATTCCCACTTCTAACAGGCTGACAGGAATGATTATTGCGAACGAAGAGCTCATTGACGATCCGGAGCAAATTGCAACTCACAGAGAGGAACAGATGTGctcaatggaaaaattgcaAGACCCAAGTGAGACCATCGAGCACGCTTCTAGTCAGAAAAGCGAAGAGAGGTCCGGCAAATCGAAGAAGCCGTTTAAGCTATTCCTTGACACGCAAAGTAGATATCTGAAGTCGAGAAGAAACGTTAAGATCGAAGGTAAAGACGAGAAACGTGCGATGAGAGACAGTTCGGACCCAATGTGGAGGGATGTTTTGTACACGAGCATCGAGCATCAGTTGCCGAGCTTGGGGTTGTTGGAACATGCGAACGAGGATCTGGACCGCTGCGGCAATGAAGcatcgacgaaaatcgaagaaaGTGAGCCCATTTTGCCGTTAAAAATCGACACCACCCACGGAGAAATGCTAGCAGTGCGCGAGGAAGACATCGTGAGGCGATCAGAATATCCGGTGTACGAAGAGTCGACGACCGCCGATGAGTCCGGTCCAGAGGAAAGAGACGGTCGAGTAAAATGCAACGTGTGCTGTcgcgaattttccgaaataaaCGATCTCCACGTTCACGCTAAGGAGCACAAAGATTCGCCGGATTCGCTAAAGATCTATCAATGCGTCGAGTGCGCCAAGAGTTTTCGTCTCAAGGACTCTTTCGTCCGTCACCTGCGAATTCATCGCGATGAGCGACCGTTCACTTGTCACGTTTGTGGCAAACAATTTCGCGACTCTGGTGGGCTGTCGAGGCATCTGAAAGACGTTCACGCGAAGTTGAAGAACTTCCCTTGCGACATATGCGGCAAAAGTTTCTCGTCGAAGGCAACGCGCGACGACCATCGACGAACGCACACAGGCGAGAGACCTTACGTTTGCGATACTTGCAACAAATCATTCAAATCCAAAGCTTGCCTCTACAGTCACAACAAGCTTCATACAAACGAATTTCCACATTCGTGCGCCTACTGTAGcaagaaatttcgtcgaaggCAAGAGATGCTCGTACACGCGACCACCCACACCGGCGAGAAGAATTATAGCTGCGACGTTTGCTACAAGCGCTTTCGCGTCAAAACCGAAGTTGTCAGGCATAAATTAACTCATTCCGACGAGAAACCTTTCGTCTGCGCAAAATCCGGTGCTGAGAGAAGATTCGAAACATTCTTCAGAAAACGGACGGAAGCGTTCGAGGGAAAGGGCTCGTTGAAACTCTCCTTCGTGCCAAGATCGAGCCGTCGAAGGCAGGTAAACTCGGctcttacaataaaaaatacgggAGCCAAGTCAACTTGGACGAACGATCTCAAAAAGGTcgttgaacagaaaaataccTCGTGCGACAGGTGTTCCAGGGTTTTCAAGAGAGAATCGAATCTGAAACGGCACGTAGCGAACTGCCGCGAGAAACCAGGAAAGAATAAGACGATCGGCACAAAACGCGAACCGATCCGGAAAGCGGCCAAGGACTTTGAGGAGGAAAACTTCGATGCTGGAGATTCGAAAGAATCGACGTCCCGCGACAAGTTCGACTCGTGGAACGTGGAAGATTCATCAATGAAGAAAAGATTGCCTATCCATCCGTGCGTGTACTGTGACTACACaacaaggaagaaaaaattattgaaaactcACACGAGCGAGCATCACTCGGAGATCTCGAAGATGAAAATCGGTCGGAAGCAGCGCAGCGTGGACAAGGATCTCGTTAATCGTTCGATGATGGAGGCGAACGGCCGTACGTACTACCACTGCAACGACTGTGGTAAAAATCTCTTCTCTCCTTACACTTTCCTCTGGCACGTGAGAATCCACACAGGGGAGCGACCTTTTACTTGTCACCTGTGTGGCAAACAGTTTCGCGTCAATCAGGGTCTGGCTCGTCACCTCCGCGAGACTCAcgccggtataaaaaaatttccctgcGATCTTTGCGGACGAATGTTCTCAACGAAAAGGAACGTCGAGGACCATCGGCGGATACACACGGGCGAGCGTCCGTTTGTTTGCAACGTGTGCGGCAAAGCCTTCAAGCAGAAAGCTTCGCTTTTCGTTCACAATCGAACTCACTCGGATTTCTTTCCTTTCAAGTGCAGTTACTGCGAGCAGGGCTTTCGCACGAGACCGCCGCTCGTCGTGCATATGACGAAACATACCGGCGAGAAGCCCCACGCCTGCGACATCTGCGACCGAGCTTTTCGCATAAAGTACGAACTGAAGCGTCATCGTTTGATACACTTCGACGAAAAACCCTGGCAGTGCACCGACTGCGGGCTGTTTCCGAAGATCAAGAAAACCGTGAGTACTGCTgcgagagaggaggaaaaagttAGTGATAGAGCAGCGGATTCGAAGCCCTTCCCGAGGGCCAAACGAACGTCGGAGCAACGTGAGGAATTGATTCGGTCGAGGATCGAATGCAATGGCGTTGCGCACTACAAGTGTCTGGACTGCGGAAAGATTCTGTCGACCTCGTACAACTTTCTGACTCATCGAAACAGGCACTCCGGCGACAAGCCCTTTACCTGCCACATGTGCGGCAAGAATTTCCGTCATGGTTCGGTCCTCAATAGGCATCTGCGTGACGTTCACACAGGTAGAAAGAATTTCCCTTGCGACCTCTGCGATCGGCGTTTGGCTTCGAGAATAGCTAGAGACGAGCATCGAAGAACTCACACGAACGAGAGACCTTACGTTTGCGAGACTTGCGGCAAGTCCTTCAGGCAGAGAGCGTCTCTCCATGTTCACAAGAGGTTTCACATGAAAAGCTACGACCACCGGTGCAAGATATGCGAGAGAGCTTTTCGAAGAAGGCAAGAACTCGAGAAACACTTGTTGATCCATACAGGACAGAAACCGCACGAGTGCGCCAAACTTCGCGACTCGCGAAGCTCTGCTTTCACGGACTTTCAGAAAGCCTACGTTAGCTTTTTCGGTTGCGCCAGTAATGATAATGTAACGAAGACCCAACCGGATCCCACCGTAGAGCACAAACACAACAAGACAGAACCTCGTCAATCTCCAGAAGAATCTTCGGAGAATACAGCTGCGATTTTCGAAAACGACAATAAAGAATCTGGCCTCACCGTTCGGCCTAACcgacgcaataaaaaattcgccaaaGTTGCAGTTGCCATGAAAACTTCTCGTAGACTCGTAGCAGTCACCGATCTTTGTGAACAATCCAGCGTCGCAGAATTGCCGAAAACGCGTTTGAGAACCAGtgggaaaataaagagaaatgaCGAAGAAAATCCGATCTCCAAGTCCAAGGTCAAGCGAAGCTTGAACGAACCGCACACGTGCGATTTGTGCGGCAAAAAGTTTCGTTTGCGGGACAGCCTGAAGACCCACGCGCGAATTCACACCGGTGAGAAACAATATACCTGCCACATATGCGGCAAACAATTTGCCCAAACGGGCTGTCTCTACTATCACCTCAAGCACGTTCACGCCGGTGTGAAGAATCATTCGTGCGATATATGCGGCAGATCCTTCGCTATGAAGACGACAATGGAAGATCATCGAAGGTCCATTCACACGGGCGAACGTCCGTTCGTCTGCGACTCGTGTGGCAAAACATTTAAAACTAAATCGTCACTCTATATTCACAGTAGAATACACACGGAAATGTATCCGCACGAGTGTAAATATTGCAAGAAGGTATTCAGATGGAGGCAACAATTGCTCGGACACTTGACCATTCACACGGGCGAGAAAAATCACAGCTGCGACGTGTGCGGCAAAGCCTTCGGTGTGAAAAATCATCTTACCAGACACAAACGCACACATTCAGCGGAGAAACCTTACGCCTGCCAACAATGTGGCATGAGCTTCGGTCAAAAACGCTATCTGACCACTCACGAACGTTTGAAGCACAGATGA
Protein Sequence: METGKPATFELSEKTLLRGTLNCENVDDDANQKNSDSIETSTENREYPESKEKRSVWSEICRVCANQNVHVVPIFEGEGFEHDLCTKIHKYLPIQVSKDDTLPVQLCYQCAATILAWHELLEGCTEAEKRLIQMQSKLKDNKQMHLEHTEIPTSNRLTGMIIANEELIDDPEQIATHREEQMCSMEKLQDPSETIEHASSQKSEERSGKSKKPFKLFLDTQSRYLKSRRNVKIEGKDEKRAMRDSSDPMWRDVLYTSIEHQLPSLGLLEHANEDLDRCGNEASTKIEESEPILPLKIDTTHGEMLAVREEDIVRRSEYPVYEESTTADESGPEERDGRVKCNVCCREFSEINDLHVHAKEHKDSPDSLKIYQCVECAKSFRLKDSFVRHLRIHRDERPFTCHVCGKQFRDSGGLSRHLKDVHAKLKNFPCDICGKSFSSKATRDDHRRTHTGERPYVCDTCNKSFKSKACLYSHNKLHTNEFPHSCAYCSKKFRRRQEMLVHATTHTGEKNYSCDVCYKRFRVKTEVVRHKLTHSDEKPFVCAKSGAERRFETFFRKRTEAFEGKGSLKLSFVPRSSRRRQVNSALTIKNTGAKSTWTNDLKKVVEQKNTSCDRCSRVFKRESNLKRHVANCREKPGKNKTIGTKREPIRKAAKDFEEENFDAGDSKESTSRDKFDSWNVEDSSMKKRLPIHPCVYCDYTTRKKKLLKTHTSEHHSEISKMKIGRKQRSVDKDLVNRSMMEANGRTYYHCNDCGKNLFSPYTFLWHVRIHTGERPFTCHLCGKQFRVNQGLARHLRETHAGIKKFPCDLCGRMFSTKRNVEDHRRIHTGERPFVCNVCGKAFKQKASLFVHNRTHSDFFPFKCSYCEQGFRTRPPLVVHMTKHTGEKPHACDICDRAFRIKYELKRHRLIHFDEKPWQCTDCGLFPKIKKTVSTAAREEEKVSDRAADSKPFPRAKRTSEQREELIRSRIECNGVAHYKCLDCGKILSTSYNFLTHRNRHSGDKPFTCHMCGKNFRHGSVLNRHLRDVHTGRKNFPCDLCDRRLASRIARDEHRRTHTNERPYVCETCGKSFRQRASLHVHKRFHMKSYDHRCKICERAFRRRQELEKHLLIHTGQKPHECAKLRDSRSSAFTDFQKAYVSFFGCASNDNVTKTQPDPTVEHKHNKTEPRQSPEESSENTAAIFENDNKESGLTVRPNRRNKKFAKVAVAMKTSRRLVAVTDLCEQSSVAELPKTRLRTSGKIKRNDEENPISKSKVKRSLNEPHTCDLCGKKFRLRDSLKTHARIHTGEKQYTCHICGKQFAQTGCLYYHLKHVHAGVKNHSCDICGRSFAMKTTMEDHRRSIHTGERPFVCDSCGKTFKTKSSLYIHSRIHTEMYPHECKYCKKVFRWRQQLLGHLTIHTGEKNHSCDVCGKAFGVKNHLTRHKRTHSAEKPYACQQCGMSFGQKRYLTTHERLKHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -