Lnyc002199.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Listrodromus nycthemerus
Gene Symbol
znf711
Assembly
GCA_963978505.1
Location
OZ021680.1:261201-267992[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 39 0.0019 0.14 12.6 3.3 1 23 137 159 137 159 0.98
2 39 1.2e-05 0.00088 19.5 3.7 1 23 165 188 165 188 0.97
3 39 0.13 9.5 6.8 4.8 1 23 195 218 195 218 0.94
4 39 4.4e-05 0.0032 17.8 1.3 1 23 224 246 224 246 0.98
5 39 0.0058 0.42 11.1 0.2 2 23 252 274 251 274 0.94
6 39 5.5e-05 0.004 17.5 1.2 1 23 281 303 281 303 0.98
7 39 2.1e-06 0.00015 22.0 0.2 1 23 307 329 307 329 0.98
8 39 0.46 33 5.1 0.6 3 23 336 356 335 356 0.91
9 39 4.6e-05 0.0033 17.7 2.0 1 23 362 385 362 385 0.97
10 39 0.00061 0.044 14.2 1.7 1 23 477 500 477 500 0.96
11 39 0.0002 0.015 15.7 3.8 1 23 506 528 506 528 0.98
12 39 0.013 0.97 9.9 7.4 1 23 537 560 537 560 0.94
13 39 0.0032 0.23 11.9 2.1 1 23 566 588 566 588 0.95
14 39 0.00023 0.016 15.5 1.8 1 23 593 616 593 616 0.96
15 39 0.011 0.76 10.3 0.6 1 23 622 644 622 644 0.98
16 39 7.1e-06 0.00051 20.3 0.8 1 23 648 670 648 670 0.97
17 39 0.00039 0.028 14.8 3.0 1 23 676 698 676 698 0.98
18 39 0.00012 0.0089 16.4 3.2 1 23 704 726 704 726 0.97
19 39 0.29 21 5.7 5.9 1 23 840 862 840 862 0.96
20 39 2 1.4e+02 3.1 3.3 1 23 894 917 894 917 0.91
21 39 0.43 31 5.2 2.9 1 23 943 966 943 966 0.97
22 39 0.014 1 9.9 6.0 2 23 1006 1027 1005 1027 0.97
23 39 0.015 1.1 9.8 2.5 1 23 1036 1059 1036 1059 0.98
24 39 0.045 3.3 8.3 1.7 1 23 1074 1097 1074 1097 0.95
25 39 0.00015 0.011 16.1 2.0 1 23 1103 1126 1103 1126 0.95
26 39 0.043 3.1 8.4 0.8 3 23 1133 1154 1131 1154 0.94
27 39 0.0056 0.4 11.2 0.4 1 23 1159 1182 1159 1182 0.97
28 39 7.2e-08 5.1e-06 26.5 0.4 2 23 1189 1210 1188 1210 0.97
29 39 4.2e-06 0.0003 21.0 0.5 1 23 1216 1238 1216 1238 0.97
30 39 1.3e-06 9.2e-05 22.6 0.1 1 23 1244 1266 1244 1266 0.98
31 39 7.7e-05 0.0055 17.0 2.1 1 23 1380 1403 1380 1403 0.97
32 39 0.0087 0.63 10.5 0.2 1 20 1409 1428 1409 1429 0.94
33 39 0.0009 0.065 13.6 1.1 2 23 1480 1501 1479 1501 0.96
34 39 0.035 2.5 8.6 5.8 1 21 1507 1527 1507 1530 0.94
35 39 0.0053 0.38 11.2 1.5 2 23 1536 1558 1535 1558 0.95
36 39 0.00027 0.019 15.3 0.9 1 23 1563 1586 1563 1586 0.97
37 39 3.4e-06 0.00025 21.3 1.0 1 23 1601 1623 1601 1623 0.98
38 39 0.00031 0.022 15.1 0.3 1 23 1629 1651 1629 1651 0.97
39 39 2.7e-05 0.002 18.4 0.0 1 23 1657 1679 1657 1679 0.98

Sequence Information

Coding Sequence
atgaagaaaagtgACGAGAAGAGAAGATCGACTACCGAACTGCCGGACCGGAAGAGCAACGTCGCTGCGCCGCCCTCGGAACTGCCGTCCAAGCTGAAATCCGTACGACCCAGACGGAAGGCAGACATCTCAATGGACGAGAAGGTACCtccgaaaaaaagacgatcgagccgaagaaaaatcgtcgggagATCGACGATGAGGAAATACCTCGAGTCCAGCACCGGATCGGAGGATTCCATGGATGAGAGTTCTCACGACTGTTGGTCGGTTTCCGATGAGGGGCCCTCGAAATCTGTAAAACTCGAAACactgaaaatttcgaagatgGACGAAAGTTCGCACGACTATTGGCAAGACTCCGACGACGATAATCGAaagtcggtggaaaaaaaaccggaaaaggGTTACAATTGTCCAACTTGTGAAACCCATTTTACCTTGCGCCGTGACTACAACAAGCATATGGCGAAGCACAACAATTTGAGGCCATATGAGTGTCACGAATGCAAGAAGAAATTCAAATACAATGTTGGCCTGAAAAAGCACATGGAATCTCAGCACAGCGAGAACGCCCCAAATTTCACCTGCGATATGTGCGAATTCACAACGAAACAGTCACATTATCTTCAGGAGCATTTCACGAGAAAACACACTGAGGAGTACAAGTACCAGTGCAGCATTTGTGGCAAAAATTTCAAGGCCGAACGAGACTACAAGACTCACATGAGTAACCACGAGACCGGTCCGCAGGTATGCGACATATGCGGTGTTTCTTATCCGAACAAGATATCCCTGTACTctcacaaaaattacaaacacaCCGACAAGATAAAACCGTTTGAGTGTACAGTGTGCCAGAAACGTTTGAGAACCGAGAAAAACTTGGAGAGTCATATGCAGCAGCACAATCAGACGTACGTGTGCGAGGAGTGTGGCATGAAGTTCGCCAGGCAAGCCGGACTGACGAAGCATCGCAAGGTTCACGGAGAGAAGACTATTCTGTGTCCTGTTTGCGGCAGGGCATTCGCCTGCATGACAACCCAGAGGGTACATATGGTCACCCACTCGGACGTGAGGCCGTACATATGCGACGTTTGCGGCTGCAGCTATACCCAGAGATCATCCCTCATGCTTCACTGGCGAAAGAAACACCCCGACGCGAGCCAACCACCACCGCCCGTTACCCTCAAAAATATCTCCGAGACGGATGAAGTTAAAGGTCTGCATTCCGAATTATCCTCGGTAGCGAAGTTTAAAATATCGAGGCACCCAAGATTGAAGAAAGAGTCTCTTCCACGGCGAGCAAAGCTCGAGATTCTAAAAACCACACCGGACAATGGAAAAAACGGTGAGACATTGGCCTCTGACAAAACTGAGGAAGATGTCGATCGGGACGCCTTGTACAAGAGACTCAACGATGGCAAGTACACCTGCGACATTTGTCAAACGAGTTTCCAGCAAAAGAGCAAGATACTGCGTCACATAACGAGCAAGCACAGTTTCCACCGACCCTACAAGTGTTCTCTGTGCTCGAAGGCATTCAAGTATAAGTGCGACCTCAAAGCCCACAAGCTGATCCACCAAACCTCTGACGCGTGCATGCTACACTGCTGTGACAAATGCGACTACacgacgaaaacgaaaaacaaccTCAAGTCCCATTACATAAGAAGGCACACCGACGATTACAGGTTTTCATGTGAACATTGTGGCAAACGTTTCAAGATGGAGTGGGACCTGAAGTTTCATCTCGGCACTCACGGCAACTCACAGCACATGTGCGATATATGCGGTAGATTTTATACGAGCGACTATTCGCTTTACAAGCATCGCAGGGTCGCCCATCTGAACGACTATAAATACCGGTGCTCGGTGTGCAACAAAAGACTGTTGACCCAGGTAAATTTGGATAGTCATATGCTCCAACACAATCAGACCTACGCGTGCAAGGAGTGCGGGAAGATGTTTGCTTCTAAGAGGTACCTCGCCACTCACACCACCACCCACACCGGTCTCAAACCCTACAACTGCGGTATCTGCGAGAAATCTTTCAGAACTTCGCACATGCGCAACACTCATCTTCTCACTCACTCGACTGAACGACCGCACATTTGTGATCTCTGCGGTCAGTCATTCAAGAGACGATATTACATGATAGAGCACAGAAGAAAACATCCGGACTCGCACCTAAGCTGCGCGGAGTTTGTCGGGCAGGGGTCGACGAGTGACGGCGTTGCTGTCGGACGTTATACAGCTGAAGATAATACCGCGCCTGTCGCGTTGTGTCAGCACGGTGGATCGAACGGCGAGCCTCGGTATTCCCTGGTGCCCGAGTTTCGTTACCAGCAAAGGATGGCGAAATTCGAGAACGGTGATCCTCTACAGCAGTCGTGCTTGGACATTAAGATCGAGATCGACGAAGATACCGCTGCAACATGTTCGCAGACGAATCGCGAGGCATCTCGTCGTACCGTTCACTCCCTGGCTCATCGCTACGAGGTCGCCGTCCAGTGGCACTGCTGTGACAAATGCACCGCTAAGTTCCCGCTTAAGACAATGCTAAAGCGTCACAAACTCTCGCACAATTACCGaagaaatgaaggaaaaatcgaagaatccTCAAAATTCCGGTCGCGAAGATCCAGGACGGAGAAACGTTGTGTAGCTCGATCGAGGTACATTTGTCACATCTGCGATTTCGGCTGTGACAAGCGTGGTGCAATGTCGTATCATTTGCAGTTCAAGCACGGCAGGAAAATTTTGGCCCGGAAAGAAAATCTGAAGCGCAACACTTTCGAGGCTGTCAGCGAGAGGAGCGAAGTTTTCAAATGCGACGTCTGCAGCTTCGAGTGCATGAAACGAGGCACACTTGTTTCGCACGTAAAGAGGAAGCATCCCCGAGCGATGAAGCTTGAAATCGTGAAGGGAGTCGAGCAGGATAATCACCAATGCGTCAAGCTGGATCCGACGCCGGGAAGAAATCGGAAGAAATCGTCGATGGCGGAGAGCTTGAAGTGCAACAGCTGCGGTTTCAAGTGTACGAATCGGAGCACCCTCTACTCGCACAAACGACGTCATCGAGCAAAGGAGGCCAGCGAGCTTTACTCGTGCAACGAGTGCGATTTCAAGACCGGAAAGAAAACGTCACTCTACTCGCACATAAAGCGCAAGCACAAACCACCGAGAGCCTCGAACGACACCGAACAGCCTGAACTATTCTCGTGCAGTCAGTGCGACTacaagaacaaaaacaaatacgaGCTCAAGGTCCACGTGGCACGAAAGCACACTGACGACTTCCAATTCTCGTGCGAGAATTGCAGCAAGAAATTCAAGGTCAAGGGCGATCTGACGAATCACGTTAGGTTCAGGCATCGCGAGCAGCCGGTAATCTGTGACGTTTGCGGCAAAACATGTCTAAACAGCAACTCGCTCTACGTTCATCAGAAATTCGCTCACTACAAGGCCAAGTATGAGTGCCAGGTGTGCAAACGGCGGATGGTCAGTCAGGAGAATCTCGATGAGCACATGCTGAGGCAGcacgagaaacgcgagaaCGTTGTCTGCGAGGAGTGCGGAAAAACTTTCTCGCGCAACAGCAGACTCAAGATCCACATGCGTATACACACCGGTGATAAACCGTACGACTGTAGCGTTTGCAACAAATCGTTTGCCAGAAGAACGGCACTGAAGCAACACCTTCTCATTCACACCGGCATGCGACCTTACGTCTGCGACATATGCGGCAAAGCCTTCACACAGAAACCCGGACTCATAAGCCATCGAAAGTCACATCCTGGCCCTCTGCCACCCCTTCCGCGAGTACTCATCGATCACATTCTCAACGACGTATTGAAACCCAATTTGATCCTTTGCCGCGATATTCAATTCACCTCGAGAAAGCTTCCGGTCCGACGTTCGCAGAGGTTGAAGGGTAGGAATTCGGAGGATTCTACGATATGTTCGAGGATAAAGGAAGAAATTACAGAGAACGAGAACGTTGATGCATCGAACGGTAATCCGTTCTTCCGCGTGGTAATAAAGAGAGAGGATGACGTAGTCTCGAGAGCCGACGAGGGCGAGGAACTCGTCCTTCTGAACGACGAAGGCGGCAAGGAGGAAGTCTACGGCGATTATTCATGCCAAAAGTGCAACATATGCTTCGCCACTCGGAACATGCTTACGATTCACATAAAGTCCGTACACGAAGCGATACAGTGCTTCAAGTGCAAGATATGTTCGAAGGTGTACAACAACGTGGGGGCTTTCCAGTTGCACGTGACGCCCGATCACGGGAGGGACAACGACCCTGTAAACAATTGTCTCGAAATCCTGACCCTCTATCGAGTCTCGCGCGGTACGTCCCTCGACACCcgcataaaaagaaaattcagcaCCCGAATAAAATCGTCCATAGCGGATAACCCGGAGATGTCGTGCAGTCTGTGCGACTATAAGACCAAGAACAAGACTTCGCTGGAGAAACACGTGGCGACGCACGTCGAGGAGCCCAACTTTTCGTGCgagaagtgcgaaaaaaaattcaaatttcgtcgaaatttaatttaccacaaaaaatgcattcatcGCGAGCTTTCGTGTATATGCGACGTTTGCGGGGAGACGTGCGCCAACAACAACACCCTTGACGCTCACAGAAAATCCATCCACTTCGAAGGCAAGTTCCAGTGCAAACTGTGCAATCGGTTGCTGAGAAGTCGGGAGAACCTCGAGGCGCACATGTCGCGGCAACACGCGCAGAGAAAACCGGCGAAGGCGAAACCTCTACCGAATAATTTCGTGTGCGAGGCATGTGGCAAAGTCTTCAGCAGAGTCGATCATTTGAAGAGGCACAACCGCGTGCACACCGGCGAAAAACCGTTCGAGTGCGCTATATGCAAGGTGAATTTCGCCAGAAAGAATTCTCTCACTCAGCACTTGTTACTTCACACCGGTGCTAAACTGTACGCCTGTGACATATGCGGCAAAGCTTTCGCTCAGAAACCCGGACTCTCCGGGCACAGAAGATCGCATCCCGGTCATCATCCACCTCTTCCGCCCGTACACGTCGGTCCCGTTATCGAAGACATTCTCAAAGAATGCGAAGGATAG
Protein Sequence
MKKSDEKRRSTTELPDRKSNVAAPPSELPSKLKSVRPRRKADISMDEKVPPKKRRSSRRKIVGRSTMRKYLESSTGSEDSMDESSHDCWSVSDEGPSKSVKLETLKISKMDESSHDYWQDSDDDNRKSVEKKPEKGYNCPTCETHFTLRRDYNKHMAKHNNLRPYECHECKKKFKYNVGLKKHMESQHSENAPNFTCDMCEFTTKQSHYLQEHFTRKHTEEYKYQCSICGKNFKAERDYKTHMSNHETGPQVCDICGVSYPNKISLYSHKNYKHTDKIKPFECTVCQKRLRTEKNLESHMQQHNQTYVCEECGMKFARQAGLTKHRKVHGEKTILCPVCGRAFACMTTQRVHMVTHSDVRPYICDVCGCSYTQRSSLMLHWRKKHPDASQPPPPVTLKNISETDEVKGLHSELSSVAKFKISRHPRLKKESLPRRAKLEILKTTPDNGKNGETLASDKTEEDVDRDALYKRLNDGKYTCDICQTSFQQKSKILRHITSKHSFHRPYKCSLCSKAFKYKCDLKAHKLIHQTSDACMLHCCDKCDYTTKTKNNLKSHYIRRHTDDYRFSCEHCGKRFKMEWDLKFHLGTHGNSQHMCDICGRFYTSDYSLYKHRRVAHLNDYKYRCSVCNKRLLTQVNLDSHMLQHNQTYACKECGKMFASKRYLATHTTTHTGLKPYNCGICEKSFRTSHMRNTHLLTHSTERPHICDLCGQSFKRRYYMIEHRRKHPDSHLSCAEFVGQGSTSDGVAVGRYTAEDNTAPVALCQHGGSNGEPRYSLVPEFRYQQRMAKFENGDPLQQSCLDIKIEIDEDTAATCSQTNREASRRTVHSLAHRYEVAVQWHCCDKCTAKFPLKTMLKRHKLSHNYRRNEGKIEESSKFRSRRSRTEKRCVARSRYICHICDFGCDKRGAMSYHLQFKHGRKILARKENLKRNTFEAVSERSEVFKCDVCSFECMKRGTLVSHVKRKHPRAMKLEIVKGVEQDNHQCVKLDPTPGRNRKKSSMAESLKCNSCGFKCTNRSTLYSHKRRHRAKEASELYSCNECDFKTGKKTSLYSHIKRKHKPPRASNDTEQPELFSCSQCDYKNKNKYELKVHVARKHTDDFQFSCENCSKKFKVKGDLTNHVRFRHREQPVICDVCGKTCLNSNSLYVHQKFAHYKAKYECQVCKRRMVSQENLDEHMLRQHEKRENVVCEECGKTFSRNSRLKIHMRIHTGDKPYDCSVCNKSFARRTALKQHLLIHTGMRPYVCDICGKAFTQKPGLISHRKSHPGPLPPLPRVLIDHILNDVLKPNLILCRDIQFTSRKLPVRRSQRLKGRNSEDSTICSRIKEEITENENVDASNGNPFFRVVIKREDDVVSRADEGEELVLLNDEGGKEEVYGDYSCQKCNICFATRNMLTIHIKSVHEAIQCFKCKICSKVYNNVGAFQLHVTPDHGRDNDPVNNCLEILTLYRVSRGTSLDTRIKRKFSTRIKSSIADNPEMSCSLCDYKTKNKTSLEKHVATHVEEPNFSCEKCEKKFKFRRNLIYHKKCIHRELSCICDVCGETCANNNTLDAHRKSIHFEGKFQCKLCNRLLRSRENLEAHMSRQHAQRKPAKAKPLPNNFVCEACGKVFSRVDHLKRHNRVHTGEKPFECAICKVNFARKNSLTQHLLLHTGAKLYACDICGKAFAQKPGLSGHRRSHPGHHPPLPPVHVGPVIEDILKECEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00059605;
90% Identity
-
80% Identity
-