Lnyc010903.1
Basic Information
- Insect
- Listrodromus nycthemerus
- Gene Symbol
- Trerf1
- Assembly
- GCA_963978505.1
- Location
- OZ021685.1:5242613-5255725[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.7e-09 5.4e-06 26.3 0.0 2 46 1292 1336 1291 1336 0.96
Sequence Information
- Coding Sequence
- ATGACGAGCAACATAGAAAGACGAAGAGAATGTCAGCGGCCGCGCGTTTACTATTCTTCGGAGTCTTTGATAGGAACTCCTGTCGTTGACGAGCGGAAGTCGTCGGAAATTTATGCTTTAGTGAAACTTTACGTAATTAAAcagcaacagcagcaacagcagcaacaacagcaacagcagcaacagctgCCGCAACACCAACAGCAGCCGCAACCACAACCACAACCACAACCACAACCACAACCACAACCACAACCACAACAAAAACCGCAACCGCAACCACAATCGCAACCACAACCACAACGACAGCAGGCtcatcagcaacagcaaccGCAACCCCAACTGCAgccgcaacagcaacagcagccagAACAGTATTCAGACCAGCAGTCAGAACAGCAGCCGGAACAGCAGCCGGAACAACAGCCAGAACAGCAGCCGGAACAGCAGCCGGAACAGCAACCGGAACAGCAGCCGGAGCAGCAGTCGGAACAGCAGCCGGAACAGCAGCCGCATCAGCAACAGCCACCCCAACACCAATCGCAATCGCAACCGCGAGAGCaactgcagcagcagcaacagcagcagcagcagcagcagcagcagcagcagcggcagcagcagcagcaacagcagcacccGCAGCAGCAAccacagcagcaacagcaacagcaacaacaacagcaggaGCAACACCAACAGCAGCagaaacagcaacagcaacaaccaCAGCAACAGCAAGAGGAACACCAAcaccaacagcaacagcaagaGCAACACCAACAGCAGTCGcatcagcaacaacaacagcaagaGCAACACCAACAGCAGCCGCATCAGCAACAACCACTGCAACCGCATCAGCAACAATCACTGCATccgcaacagcaacagcagccggCACCACAACCGCAACCGCAACTGCAACCGCCGCCGAGACAGCAACAGCAACCCCATCCGCGACAGCAACCGCAACTGCAACCGCAATCGCAATCGCGTCCGCATCCGCAGCAGCATCTGCAACAGCAACAGGAGCCACTACAGCAGCCTCAACAACAGTCGCAACCGCATCCACAACCACAATCGCAACCGCAACCGCAATCGCAACCACAACCACAACTTCAACCACAACCACAACCACAACCACAACCACAACCACAACCACAACCACACCCGCAACCGCAATCGCAATCGCAACCACAACCTCAACCTCAACCTCAAccgcaacagcaacagcagcccAAACCGCAACAActacagcaacagcagcagcatcaccATACAGCGCAGACCCAGCAGGCTCATCAGACGAACTCGCCTGGAAGCGGAAACGCGGGGAAGGGAAGCTCATCTCCTGCAAACTCGGCGTCACCGGCTGGTATCATCACCGCCGTCTCAAACAAGGCTCAAGCCGAGCCGAAACCGGTCGAGTGCAATCTATGTAGCCGAACATTCAAAAACATACCAGCTCTAAACGGACATATGAGATTGCATGGCGGCTACTTCAAGAAGGACGAGAACaagaagacggaaaaaaaggaaactccGGGACCTCCTCTTCAGACGGCTTCGGTTAACGTGAGGGCTCTGATCGAGGAAAAGATCATACAGAAAAGAACAACAGCGACGGAAGCGAACAACAGTAATCAGGCTCGAGCGAATGCAATATTGATGAATCAGTCTGACGGTTATACTCACGTTATCGGTAAAACAAGCTTCGCCGTTCCAGCGCCACCACTTCTCGCCGCTGGTGAAAAGATCCGGAGACTTTCGGACACGGAACACTTCCGGCAACCAAATGTCACGGTCAGCGGTCATGCCGCTGTCCAGAAACAACTGCAGGAGGCACAGACTCAGGCACAAGCGCAGGCCCTCGCTGATATGATTCTCAAGGGGACAACAAAAATGGCGGTGAAGAGAGCTACTTCCGATCCAGGTCAAAGGCTTCTTACTTATCAGACTTCGGTGACGTCGGCAgtgcaacaacaacaacccaGCCAAGCCCAGGTACCGTCGCAACCGGCAGTAACCGAGAGTTTCACGATGACCGGATATTCCGAGGATGGAGGCTATTTCAGTCCTAGCTTACAGGACGAAGTTTTCCAGCATGTAACCGCGGTACCGGACTCCGTGCTACTTCACGCGACCCAATTGGATTCCATTCAGttccaGACGTCGAGTCTTCTCCAGGAGCAAACGTCGGAGCCGTTGCAGGACATAACGCTCGAGGATCGTTTCACATCGCAACACACAGTGAATCCAGACCTTCAGGCTCTAGTGAATTCGCCGTTGCCCGATTCACTGGCGGAATTCAGTACATACGGTGCCCAGTATACCGAGAGTCCTCATACATTGCCGTCTCAGTCACCGTTGCCTTCGCCCCTCACGAGACACGACAGTCCCAGTTTTACCTATCCGACACCACCGGCGAGTCAGGAGGGTCTCTTAACGAGTACTCTGCCCTTGCTGAGTCCTCAGGAGGATCCAGACTCTGTTCGACCGGTCTCCTCACCGTTATCGGCAGCTTTCTATACGACAACTATGTCTTCAGCCGCCGCAGTGGAGGAAGCTCTGAGCGAAGTTCTCCCTTGTGAATCCGAAACGGATGCTGATCTCTACGGTCCAGGCTCGCCAAATCCAAACTCACCGTTGCCGAGTCCACTGTCGACAACACCGGCACCATCGCCTCTGTCCTCTCTGCCTCCTTCTTCAGTGTCTTCACCGGGCACCGGAACTTTCTCTTCCGGATTTCCGGTATCGCCTCATCACGCGCTACAAAATCACATGATGCCAAACTCCGAGGACCCACTTCTGTCATCGAGTCCGAAAGACTTCACGGGTGGTAGACGAAAGTTTGAATTTCAATCGTACAAATTGATAACGAGTCaaaatctcgtcgattttGGACTTGGCAATGGAAGCGTCACCGGTATCGTTCTCGACAACAACGGGGAGTACAAACTCATACAGACTACTGGATTGCAGAAAGCCAATGTTTTGGTACCCACTGGATCCTTGAGTCCCGCTATGACATTCAGAAAAGAGATACGTCTTGCCAACCCGAAAATCGAACCGGGTGTCGTAAACATATCGAATCAAGGATTAAACGTACAGACCCAACATTTTCATCAGAATCAAATACACCAGAACGCCATTAATCCGGCCAAATTTCTCATACACACGAATcaagcgacgaaaaattcggtgAAGCATAAAATAGCTGTGAACAGTTTGCCGATACCTATAGACCAGATTAAAGAGGAACTGTTGgacgacgatatttttctaagTCCCGGTAGCATACCGACGAGTAGTCCTGTTAGACAGTCGAGGAAGAGACCGAGAATTGATGGACCATATACGAACTCGTCGCATTCCTATCCATCGCGATTAAGGCGAGTCTGCGATAGACACTGGGATAGCAGCTACACACCACCGCCGATCTTAGATCCCTCGAGATCGGGATCCGGTCTCTACGCGAGATTGCATCAACACGAGAGAGATTCGGAATTTAGTTCGGATGACTCACAAGGAAACGATGGACCGCCGCCGAGAATTAATATCGGGACAAGATACCAAGCTACGATACCACCTGTTGGATACGACGGTGACAGAGGCCGAGGAGGGCGAGAAACCGATCACCCGCTTTGGGATCCCGGCATAACTTGGCAGCTCACTGACACTGAACtcgagaTGTATGTGCAGTTTGCCTGTTGCGCAGCTACCCCTGGTGGTGGAAGAAACAAAGAATATGCCCTTCACCTTCTGCACATGTGCAAAGGAAATATTcatGAAGCGATGCTGAAGCTAATGAGACCCACCCCGATACTGCCATCGCAGCATCCCTTGCTGAGCTACGAGTGCCACGAGTCCGATCGTTGGACTTCTCATGAGATGGGCGTTTTTTATCAGGGTCTACTCGAGTATAATAAGAACTTTGCTGCAATAGCTCGTGACGTcggaacaaaaacaacaaaacagTGCGTACAATTTTACTACTTGTGGAAGAGGCTGTGTCCAGACGAATACAAGAGGCTACGCGCGAGACACGGAAAACCAAAGATCAAGAGCGAGAGTAAAGATTACAATAGAGACACCAAGGATACAAAAGAACTCCGTGATGCCATTGCATCAGTCACTGAAATGAActtcaacgaagaaaaatcgatactCCATCGCACACTATTACagacgaacgagagagagaattcGGCGACGCTGACAACAAGCGAAGGGGAACTGAGGCTTTTTGCCTACGACTGCCCTGATAGCTTTAGCGGAAGCGTAACAGTAACGATGACCGGATGCACCCAAACCGCCAAAGCCGTCAATATCGGCAACGCCACAGTCAACAACAACTCACAAACTCACATTAGCTCTGAGCAACAACTACCCGTGCCCACCCCACTTCACTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCCGAAGTGCCCATATGAAATCACATCGGCCAATACCATCACCCGATACAATGGGTCAGGAATCTAAAAGGCCTGTCCAGCACCAGCAACAACCAATATTGCATCAATTAAAACAACCTCAGTACCATCAGCAGATCAACGGATCAACGCAGCTGACGGATTATCCGAACAAATTGTCATCAAGCACCAATGATCCCAGCAATGCAAATGCCAATAACTTGTGGCACAATCCAACGCGATTGAGGCCGCCATAG
- Protein Sequence
- MTSNIERRRECQRPRVYYSSESLIGTPVVDERKSSEIYALVKLYVIKQQQQQQQQQQQQQQQLPQHQQQPQPQPQPQPQPQPQPQPQQKPQPQPQSQPQPQRQQAHQQQQPQPQLQPQQQQQPEQYSDQQSEQQPEQQPEQQPEQQPEQQPEQQPEQQPEQQSEQQPEQQPHQQQPPQHQSQSQPREQLQQQQQQQQQQQQQQQRQQQQQQQHPQQQPQQQQQQQQQQQEQHQQQQKQQQQQPQQQQEEHQHQQQQQEQHQQQSHQQQQQQEQHQQQPHQQQPLQPHQQQSLHPQQQQQPAPQPQPQLQPPPRQQQQPHPRQQPQLQPQSQSRPHPQQHLQQQQEPLQQPQQQSQPHPQPQSQPQPQSQPQPQLQPQPQPQPQPQPQPQPHPQPQSQSQPQPQPQPQPQQQQQPKPQQLQQQQQHHHTAQTQQAHQTNSPGSGNAGKGSSSPANSASPAGIITAVSNKAQAEPKPVECNLCSRTFKNIPALNGHMRLHGGYFKKDENKKTEKKETPGPPLQTASVNVRALIEEKIIQKRTTATEANNSNQARANAILMNQSDGYTHVIGKTSFAVPAPPLLAAGEKIRRLSDTEHFRQPNVTVSGHAAVQKQLQEAQTQAQAQALADMILKGTTKMAVKRATSDPGQRLLTYQTSVTSAVQQQQPSQAQVPSQPAVTESFTMTGYSEDGGYFSPSLQDEVFQHVTAVPDSVLLHATQLDSIQFQTSSLLQEQTSEPLQDITLEDRFTSQHTVNPDLQALVNSPLPDSLAEFSTYGAQYTESPHTLPSQSPLPSPLTRHDSPSFTYPTPPASQEGLLTSTLPLLSPQEDPDSVRPVSSPLSAAFYTTTMSSAAAVEEALSEVLPCESETDADLYGPGSPNPNSPLPSPLSTTPAPSPLSSLPPSSVSSPGTGTFSSGFPVSPHHALQNHMMPNSEDPLLSSSPKDFTGGRRKFEFQSYKLITSQNLVDFGLGNGSVTGIVLDNNGEYKLIQTTGLQKANVLVPTGSLSPAMTFRKEIRLANPKIEPGVVNISNQGLNVQTQHFHQNQIHQNAINPAKFLIHTNQATKNSVKHKIAVNSLPIPIDQIKEELLDDDIFLSPGSIPTSSPVRQSRKRPRIDGPYTNSSHSYPSRLRRVCDRHWDSSYTPPPILDPSRSGSGLYARLHQHERDSEFSSDDSQGNDGPPPRINIGTRYQATIPPVGYDGDRGRGGRETDHPLWDPGITWQLTDTELEMYVQFACCAATPGGGRNKEYALHLLHMCKGNIHEAMLKLMRPTPILPSQHPLLSYECHESDRWTSHEMGVFYQGLLEYNKNFAAIARDVGTKTTKQCVQFYYLWKRLCPDEYKRLRARHGKPKIKSESKDYNRDTKDTKELRDAIASVTEMNFNEEKSILHRTLLQTNERENSATLTTSEGELRLFAYDCPDSFSGSVTVTMTGCTQTAKAVNIGNATVNNNSQTHISSEQQLPVPTPLHYPCKICGKVFNKVKSRSAHMKSHRPIPSPDTMGQESKRPVQHQQQPILHQLKQPQYHQQINGSTQLTDYPNKLSSSTNDPSNANANNLWHNPTRLRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -