Lnyc006065.1
Basic Information
- Insect
- Listrodromus nycthemerus
- Gene Symbol
- snpc-4
- Assembly
- GCA_963978505.1
- Location
- OZ021682.1:2972668-2975313[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.1 2.1e+03 -1.2 0.0 3 18 162 177 160 178 0.88 2 5 4e-09 2.8e-06 27.3 0.3 3 44 262 305 260 307 0.94 3 5 1.1e-08 8e-06 25.8 0.1 2 43 315 360 314 362 0.96 4 5 3.5e-13 2.5e-10 40.2 0.0 1 45 369 414 369 415 0.93 5 5 1.8e-14 1.3e-11 44.4 0.2 1 41 422 462 422 465 0.98
Sequence Information
- Coding Sequence
- ATGAGCGACACCGAGGACGACAGTGAGCTTCTCGACGAGATAAAAGCCCTCGAGGACATTCTCGCGAAGGACGAATGTTCGTCTCCGAACTTCCGCAAGGAAGTCGCAACGCCGAACCTAGCCTCGCGTCGAACGAGCGTTCCGTCGAGAGGATTCGGCGAGGTGACGCCCCACCGAGAAGCCGTAAACGACGTCAACGATTCTCGCACTGCTTACGAAACCAACAAATTGCTTATAGAACTCCTTCAGGAAACGAAGATCGAGCTACTGGCGATACtggaaaaatgcatcgaaaaCAAAGCCATAGTgacagaaaaaattcacgcaaCTGCGAGTAACAAATGCAATACGAAAGTTTTTGTTGCCACTGCTGGAATGCCTTACTTCAAAACAtcacaacatttttcagcTCCTTGCAACAACGACGCGATGACGAAGGCGAGGAAAGGCGAGCTGCAATACATGCAGCTTCGCTACACGTGTCCCTGGACCTCGAAGGACAGGAACATTCTCTGGAAGGCGATTCGACAGGAGGCGGCGGCAGCGGTTCTGGAAACGGAACGCGAAGATGGAGCATCCGGCCAACGGGGAAAGCATGTTTCGGGCTCCATCGGATCGGGGAGCTTGAATCTACCTAAGAACTTTAAGGCTATGATCGGCCCTCTGGACGACAGAGAGTTCGATTGGATGAAGATCGCCACCTCAGATTTTGAGAGCCGGCACACCTCGGACGAGTGCCGAGTGATGTGGAGAGTCTTTCTTCATCCTGACATAAACAGATACACGTGGACGAAGGAGGAAGACTCGAAGATCGAGAGCCTGAGCATCAAGTACAAGCGTCAAAATTGGGAGGCTCTGGCGATGGAGTTGGGGACGCAGCGGAGTGGCTACCAATGCTTCATAAGATTCAACACGAACAATAGGGCGATGTCGGCAAACGAGCGGCCGTGGACCAACGAGGAGGACGCACGATTGTCGATGTGCATCGACAGATTCAAAATTGGGAACTATGTGCCCTGGGGCACAGTGGCAATTTACATGCACGGAAGGAACAAGAATCAGGTGTACTTTCGCTGGACCTACAACGCCGCGCCGCACCTGAAGAAGGGCAGATTCACGGAAGAGGAGGACGCGACCTTGCTGGACGCGGTCGAGaagtatggaaaaaatttcagcagGATATCGGAGCGCTTGATGCCCGAGAGATCGAGCGCTCAGCTGAACGATCATTACCTGACGCTCGTTCAACGGAAAAAGGGCGGGAGACAGTCGTGGACCATCGAAGAGGACGCGAAATTGTTGAGACTATTTGGTAAGCACGGACCCAATTGGTCGAAAATAGCGCTTGAATTTCCAGGAAGAAACAGGACTCAGGTGCGTCATCGTCACTCGTCGATCATCCGCTATTGGGACAAGGGCGTTTCGCTGTTCGACATCCCGCGAGAATACGGCAGGGTAAACGTTATCGACACCGGCGATACCGATGTGATCGATCGACTGGAGCGCGAGAGGCTTCAGCAACTTGCGACGAAAAAACACTCGAGGATGGAGAAAGTCGATTTCGAGCTGGCCAAGTTTTTTGAGCTTGTACCGCCTGCATCGAGATCCGGACGGAAAGCCAAGTATTACAAGGAAGATGAGCTCGAAAAGGTCACTCGAAATTTATACATTCTCTTGAAGACGTTGAACGCACATCTCGTAATACCTGATGAGCCATACCATGGGTTTCTCACCGAAAAGGACAAGCAGTTGttgaaatcgttgaattatttgcACTTGCAGTCCGAATGTCCGAAACGCCCGGTGAACGCTATTGAATCCAAAAGAGGAAACATTCGCGGTGCGAGAAGGAAGGATGATGGGGAGAGACATTTCGCACCGCTGTGTTCCGGCAACTGCAATAGGACTGGAAAAACCAGACTGGATGACTCGATAGACTATCAGGACAATCAGCAATTCGACGACTGCCGCGTGAAATTGAATATGGAATGTCCGACACCGATGGAAGTCAGCGACACAttcagcgaagaaaaaaatgaagatttcgACAAAGTCATGAAAATTGTTCAGACAGAACATATTACGTCGCGtgaacgaaatttcgttcgacAAATGTATGCATCCCAATCTAGAGAACTCTCGACGAAGTTACCCAATGTCGCGGTGGAGAGTTTGCCGGACGATTCTCGAAGTCACAATCTCGGCCGGCCAAAGAAGAACAGTCCCAGGAAGAACAAGAAGGAACGCGCAATCACGCTTTGGGGCTGCAGCATCGCTGAAGGAATAATTCACCAGCGGGAGCGGTTCACTAGCTGCGTAGAACCAAATTATCATACACTGCTTGGTTTGCAACACATTATTTCGAAAGGAGGAcaggaaaaatcttcgaactCGAGGACTCTTGGATCAAACTTCCCGATAACCGAGAGGGGCGCCAAATCCctggaaattttaaaaagacGATTGATACAGCTTTTCAAATATCCTATCGGCTTGTCGCACATTCTTCGACCGGTAACGTACGCCGAAAACGTCAAGAAAGAGACACCATTCGATAACGAGACGAACCTTGTCGAAGACTCCGAGGAAATCTTAGTTGCATCGTCGTCCAAATTTAAGAGAAGGAAATGTACGTCTGCGATTTGA
- Protein Sequence
- MSDTEDDSELLDEIKALEDILAKDECSSPNFRKEVATPNLASRRTSVPSRGFGEVTPHREAVNDVNDSRTAYETNKLLIELLQETKIELLAILEKCIENKAIVTEKIHATASNKCNTKVFVATAGMPYFKTSQHFSAPCNNDAMTKARKGELQYMQLRYTCPWTSKDRNILWKAIRQEAAAAVLETEREDGASGQRGKHVSGSIGSGSLNLPKNFKAMIGPLDDREFDWMKIATSDFESRHTSDECRVMWRVFLHPDINRYTWTKEEDSKIESLSIKYKRQNWEALAMELGTQRSGYQCFIRFNTNNRAMSANERPWTNEEDARLSMCIDRFKIGNYVPWGTVAIYMHGRNKNQVYFRWTYNAAPHLKKGRFTEEEDATLLDAVEKYGKNFSRISERLMPERSSAQLNDHYLTLVQRKKGGRQSWTIEEDAKLLRLFGKHGPNWSKIALEFPGRNRTQVRHRHSSIIRYWDKGVSLFDIPREYGRVNVIDTGDTDVIDRLERERLQQLATKKHSRMEKVDFELAKFFELVPPASRSGRKAKYYKEDELEKVTRNLYILLKTLNAHLVIPDEPYHGFLTEKDKQLLKSLNYLHLQSECPKRPVNAIESKRGNIRGARRKDDGERHFAPLCSGNCNRTGKTRLDDSIDYQDNQQFDDCRVKLNMECPTPMEVSDTFSEEKNEDFDKVMKIVQTEHITSRERNFVRQMYASQSRELSTKLPNVAVESLPDDSRSHNLGRPKKNSPRKNKKERAITLWGCSIAEGIIHQRERFTSCVEPNYHTLLGLQHIISKGGQEKSSNSRTLGSNFPITERGAKSLEILKRRLIQLFKYPIGLSHILRPVTYAENVKKETPFDNETNLVEDSEEILVASSSKFKRRKCTSAI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -