Lnyc010321.2
Basic Information
- Insect
- Listrodromus nycthemerus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963978505.1
- Location
- OZ021684.1:16414961-16426004[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-17 1.9e-14 53.0 0.1 1 44 559 603 559 604 0.94 2 2 1.4e-17 1.4e-14 53.4 0.0 1 43 1005 1048 1005 1050 0.94
Sequence Information
- Coding Sequence
- ATGTCTATCGAAAAAAGAAGTCCGTCAACGGTGCGTTGCGGTGGTGTCGCAGGTCTGGAACGGGTAGCGGAAGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCAGCACTCGGAGCGAATCAGCGACCCAGCCCCATCACCGGCTGTACCCGGGTACTGCGCTATCATCCTCGTGCAACTCGGGCGGTGGGAGTCTGGGTCAGGTAGTTGCCGCCCAGCGTCCATCCTCGGCGATCGGGGGAGCATTGGCCCAGGTAggaacgacgacgtcgacgacgacgacgacgacgacgacgacgacgacgagttcgacgacgacgtcatCCGGCGCGCCATCGACGACCTCGAGCGTGggaacggcgacgacgacaacgtgCGTGTCGCTCGATCACGCGACGAAGCTAAACCAGCTTCACCAGCAAAATTCGTCGCAGCATCTGTCGAATCATCATCGCAACAGCGGCCTCAGCAACAACAAGAGCGGCAGCATCGTTGGCGACACCGAGGAGGAACCGCGTCTGAGGCCCGAAGACATAAAGCTCGAGATCGAGGAGAGCGAGGCGGCCCAACAGCCGGAGTCGCTCCGGCAACAGCAGATTCACCGGGAAGCGCTCGGCTCGTGCGGCACAGCGAGACAGTCGAACAACAATCAGATAGCGCAGAATCAGTCGGGGCAGCGAACGAGGCCGATAAAGGAAGAGGGCCGGGAATCGGTGGAGAACGAGAACTGCCGGGccgaggagagagaggagaacgaGGGGAACGAGGGGGAGGCGCAGAAGAGACTCAAACGCACCGAGGAATCATCGGGTCTGCACGTTGGTGCGAAGAGTGCGAGAAACTCGGTGAGCCCTCTCAGGGAAAACGAGACGAGGATATCGTCCAGGGAACAGGAGACTGGAACGAACGATCTCGTCGATACAACAGGGACCAAGgaacAGCAGACGGAGGAACGGATAGAAACGCCGACGACCGGTCTGCTGAGGGtaaagaaggaggaggagctGCAAGAGGTTTCGTGGAGCGTGAATTATGGTGTCGATGGGACGGCGATCGCGAGATTAGGAAGTATCGTCGAGGTCGGGAATTCGGGAGCTTGCAAGGAACCGGAAACGGTTGCGGAAACGAGCTTGCCGTATATCGTGAATCGACGAAGCAGCCCACCTCCGGAAGACTGGAAGCCACTGGACAAGTGTTACTTCTGTCTCGATGGAAAACTTCCCCACGACGAGCAGCCGCCCCTTAGTCCTCAGAGCGAGAGCAGCAGCAGTTCACGATCGGCAGAGTCACCGATGTCGGTACAAGTCGATCCGATGGCGGCTTCGGTTGTGGCTGCGGCCCTCAGCGGAACTTATCCGACTCTTCTGCCACAGTGGTGTCTACCGCCGAGGGAATCGCCTCATGTCGGTGTCCACGGCCATCAGGATGGCCCGGGAGCGGTCGATCAACCACTCGACCTCTCGGCCAAGCCGAAAAACTCTCAGgacaaCAGTATAGCGATttcgaaacaacaaaaaatacctcTGAGGATGCCGGCGGGCCTTGATCCCAAGAGCATCTTCACCTCGTCGTACCGCGCAAAGCCGCGAATGACCGGGCCAGTCGGTGTCGGCGGTGTTCCCGTGGTGGGTGCTGGAGGCAGCAGAAGGACTTACACAGAGGAGGAGCTTCAGGCCGCGCTAAGGGACATACAGAGCGGCAAGCTCGGCACGCGTCGAGCAGCCGTTATCTACGGAATACCTCGTAGCACCCTACGGAACAAGGTGTACAAGCTCGCGCTGGAGCGTGAACGGGACGCGACCCTGAATAGCACTCACTCACATCCCCACGACCAGTCCGGCGCTCCAGCCTCCACCACCATGACCACAACAACAactacaacaacaacaacaacaacaacaacatcaacaacaacaCCATCACCAAATACGACCCAAAACGCCTCCGCAACCACTCCGCCCCCGCAAGTGGATGAGGTGGACGATAAGGATCTTTCGGGTgccgaggaggaaaaagaagtcGAGAAGGCTCTGCTGAGGCCTCTTCTGTCGCTCGAGGATCTCGTGAGGTTTTCAGCGTTGGAGGGCAGCGGCAGCGATTCCCTGAGGACTCTTTTGCAGCGGGGTCAGGAGACGGGTACTGAATGGCCGGGTTTCGAACACGCGAACATCGGACCTTACATCCAAAAGATGCTGGCAGCTGCAGCGCCTTTCAAGAGTTTGGAGACTCCGGATTACAGAATTCCGGAAGTAATGAGGCGACTGATGAGCGAGGATAAGAGATTGAACAAGGACGTGAACGGCGATCACTCGCAGCATCAACATCCGCATCATTCGCATCATTCCCACCATCACCAGTCGCCCCATCAGCAGGCGCAGCAATTAAGCCAGCAGTCGCAGTCGCAGTCAGTGCAGCAGCAATCCGGACAGCATCAGCACCGAGGTCCCATAACGAACGACGACTTCAATCCGAGTATCGAGGAGGAGGCGAGCGACAGTGCTCAGGGTCGAGCGATACTCAAGATTCCGTCCTACAAGCCGGCGAGTAGTACGCCGGGCTCGAGCAAGAACAACGGTGAGCCAACGTCGGCCGCGTTCGCCCAGAGTTTCGCATCGGCGGTGACCGCCTCGAGTGCAGCGGGAAGTCCCGGTCTCATGGAGCGCGCCAGTCCCGCGTTCTCGGGTACGAGCAGTCCGACGAATTCTCTCGTCGGCAAGGGAGTCGGCGTGAACTTTCGTGACGTCATTGCGAAGAGCATAAGCGTCAAATTCCAGGAGGGCCAAGCCGGCATGGGAACTCAGGGAGGTGGCGGAATGGTTCAAAGTCCAACAACTATGATGTCCGAGAGTAATCCCTTCAAGAGAGGAAGATACACGCCGCCTCAGCCTCCGCAGTCCCAGCAACAGCCGAAGCCTCAGTCGCAGGACAACAAACCGAAACCGGGCACAGGCGGCAAAGGTACCAGGCCGAAGAGGGGTAAATACAGAAATTACGACAGGGACAGCCTCGTCGAGGCTGTGAGGGCTGTGCAACGAGGCGAAATGAGCGTACATAGAGCCGGTAGCTTTTACGGCGTTCCACATTCCACCCTCGAGTACAAGGTTAAAGAGAGACATCTCATGAGACCGAGAAAGAGGGATCAAAAACAGCCGGACGACAAGTTAAAAGATCCGGCAACGGCGGGAGGAGCGATGCGTTCGAGTCTAGCCGACAAGAAGCCTCAGCTCAAGCCGCAAAAGCCGTATGCCTCGGCACCGGGTGGCATACCCGGCGGGCCGAACGGTCTCAAGATGCCGCCATTTTTGGAGGGCATGACGCATCTTCCGTTTCCGCATCCCTTCAATTTCTGGGGGCCCACGCCGTTCATGCCTTCGCCCTTCATCGCCGGTGCTCCAAACGTAGCGACGATCTTACCCGAGCAGTATTTCGCGACGCAGAGGATGCGAGGATTGCAGGAACAGCAAAGAAGCGCAATAGTGCAGCACGCCCAGCGGGATCGCGACGGTATCGTCGGCGGTAACACCGACCCCGGTACGTCGAATTCTCGCGGTTCATCGATGATCaaatcgacgagagaaataGCCGAGAGTTTGTACGACGGCACGGGGGCAAACGGAAGTTTCCTCGACAATCTCATAAGATCAAGCCTCGAGACGGGAATACCGCGCGATCAGAGAGCGATGGCCGACGCGCGACTGAGCCACCAGCAACAGCaaggctcgtcgtcgtcgcagcgCGAGAGAGATCGTGAACCGCGCGACAGAGATCATTTGCCGGAAGCTATGAGTAGCAAAGCGTTGATCGATCAACTGTGCAGAAATTCTAGGAGAACACCACTACCGCGTATGACGCAGGACAGTAGTGAGGACGAAAGTTACAGAGGTCCGTCGACGGTGAGATCATTACCGGACAGACCGGAGAGAGTGCCGACGGTCGATCTTAGCCAATCTCCGACCGAGAGAATAAGGCCAGACGATCAGTGCAGCGAACGATTGACCTCGCCGCCTACGCCACTGTCGATAACGAGGACCGGCAGCAGGGATGAGGATACGAGGGACTCTATGAGAATCGACAGGGGGAGCAGAGAACGCGAGGTTCACAACGGCGGCCAGCAGCAAGATGACCGAGAGCAGAGAAAAACTCTCAGCAAcctgcaacagcagcagcagcaacagcaacaacagcagcaacagctgAATCACTACCCGGATATACACAACCTCTACACCGTATCaactgacaaaaaaagtgCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGactcagcaacaacagcagcaacagataGAGTTTGCGGCCGTGAGCGGGCTCGTCGTGCAACTCCAGAGAGGCTACAATACCGAATCTGGTAGATCGACGATTGAACAAACGAACCAGAATAACGCTCAATCTAACGCGACCGGTCAACAGACGACTGTACCGCAGGAGCAACGCGGACCCGCTGTCCTCACCATGGAAGACTTCGTAGAGCAGtag
- Protein Sequence
- MSIEKRSPSTVRCGGVAGLERVAEELMGRRRWKQYQDTLYSSTRSESATQPHHRLYPGTALSSSCNSGGGSLGQVVAAQRPSSAIGGALAQVGTTTSTTTTTTTTTTTSSTTTSSGAPSTTSSVGTATTTTCVSLDHATKLNQLHQQNSSQHLSNHHRNSGLSNNKSGSIVGDTEEEPRLRPEDIKLEIEESEAAQQPESLRQQQIHREALGSCGTARQSNNNQIAQNQSGQRTRPIKEEGRESVENENCRAEEREENEGNEGEAQKRLKRTEESSGLHVGAKSARNSVSPLRENETRISSREQETGTNDLVDTTGTKEQQTEERIETPTTGLLRVKKEEELQEVSWSVNYGVDGTAIARLGSIVEVGNSGACKEPETVAETSLPYIVNRRSSPPPEDWKPLDKCYFCLDGKLPHDEQPPLSPQSESSSSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPRESPHVGVHGHQDGPGAVDQPLDLSAKPKNSQDNSIAISKQQKIPLRMPAGLDPKSIFTSSYRAKPRMTGPVGVGGVPVVGAGGSRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERDATLNSTHSHPHDQSGAPASTTMTTTTTTTTTTTTTTSTTTPSPNTTQNASATTPPPQVDEVDDKDLSGAEEEKEVEKALLRPLLSLEDLVRFSALEGSGSDSLRTLLQRGQETGTEWPGFEHANIGPYIQKMLAAAAPFKSLETPDYRIPEVMRRLMSEDKRLNKDVNGDHSQHQHPHHSHHSHHHQSPHQQAQQLSQQSQSQSVQQQSGQHQHRGPITNDDFNPSIEEEASDSAQGRAILKIPSYKPASSTPGSSKNNGEPTSAAFAQSFASAVTASSAAGSPGLMERASPAFSGTSSPTNSLVGKGVGVNFRDVIAKSISVKFQEGQAGMGTQGGGGMVQSPTTMMSESNPFKRGRYTPPQPPQSQQQPKPQSQDNKPKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKLKDPATAGGAMRSSLADKKPQLKPQKPYASAPGGIPGGPNGLKMPPFLEGMTHLPFPHPFNFWGPTPFMPSPFIAGAPNVATILPEQYFATQRMRGLQEQQRSAIVQHAQRDRDGIVGGNTDPGTSNSRGSSMIKSTREIAESLYDGTGANGSFLDNLIRSSLETGIPRDQRAMADARLSHQQQQGSSSSQRERDREPRDRDHLPEAMSSKALIDQLCRNSRRTPLPRMTQDSSEDESYRGPSTVRSLPDRPERVPTVDLSQSPTERIRPDDQCSERLTSPPTPLSITRTGSRDEDTRDSMRIDRGSREREVHNGGQQQDDREQRKTLSNLQQQQQQQQQQQQQLNHYPDIHNLYTVSTDKKSACDSKLIVDHSSQKTQQQQQQQIEFAAVSGLVVQLQRGYNTESGRSTIEQTNQNNAQSNATGQQTTVPQEQRGPAVLTMEDFVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00397979;
- 90% Identity
- iTF_00059367; iTF_01364551; iTF_00721167; iTF_00057842; iTF_00058602;
- 80% Identity
- -