Lnyc005454.2
Basic Information
- Insect
- Listrodromus nycthemerus
- Gene Symbol
- ct
- Assembly
- GCA_963978505.1
- Location
- OZ021681.1:21192587-21219834[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6e-27 5.3e-24 83.9 0.0 2 72 663 734 662 739 0.95 2 3 2.8e-32 9.6e-29 99.1 0.0 2 77 1072 1148 1071 1150 0.96 3 3 3.1e-31 1e-27 95.8 0.0 3 76 1305 1379 1303 1382 0.96
Sequence Information
- Coding Sequence
- ATGCGCGTCAATCCAACGCGAGATGTTGGCCGAGGCAACCGAGTCGGTGTAATGAGGCGAGATACGGCTCGGGTTCGAGCTGGGGAGGACGAGCCGGAGATGGTTGAAGTTGGTGTGGGGTATAGTGGCCACGAGGGTCGACCGGAGCGTTGGGATGTGAGAGAAGCTCAAGAGCTAGAAGGCGGAAGAAGACGAGGGTGTGCGGGAGCTCGGTGCTCCGAGCGAGGGGGTGGGTTTCGGAGGAGGTGGATCGAGTGGGGGAGCAGGCCGTTGGGTATCGGCGGTGAATCGCCGGCTGAACGGAAAGGACGGAAGCAAACGCGGGCGGATCGAGGGAGCGAACGTTGGACGAGGATAGCGAGAAGGGTGGAAAGAGAAGAAGGAGGATGGTGGGTGAGGGTAGCTGTTCGACTCGGCCGCGGCCTGCCGGAGAAGCAGAAGAGACGGGAAGGAGTAGTAGGGAAAGGGTTGAGCTCGAAGCCCGATCAGTCATTAGACAAGTGGATCGGTCAATTGGTCGAGGAAGTGTCCAGGTTACAGCAGAGTCTGCAGCGTCTCCAAGAGACGAGCGCTCAGGCGACGTCCCGGTTGGAGGAGGAGCTCGAGGCTCGAAGGCAACACATAACTCGGCTCGAGAGCAAGCTCGAACGCCAGCGAGACTACGATGATCTGAAGCGTGAGATAAGCGTCCTCAGATCCGTCGATCTGTCGCAAATACCGACCGGTGAGCCCGGCAAGAGCCTCGAACATCTTCTAATGGAACGGTCGAAAGCACTTCAGCAAGCCGAGGCGCTGAAGCCACCGAGCACTCCCGATGCACTCGGTGGACTAGCTTCACCCCTGCAGCGCGCCGCGACCGCTTCACCCCACGCTGGTGGTGGTGTAGGTGGTGCTGCTGGTGTCGTGACTGGTGGGAGTGCTGCACCGCCACCCACGTCCCTAGTTTCCTGTTCCCAACAAGCAATCCCGACACGTTCGACTCCAACACCCTCGTCGGTTACTTCGACTGCCTCGAGTCTCCTATTCCCTCCACCTCTCCAAAACGTCGAGACCTTTGGCTCTTTCCTCGGCGAGGAGATCGTCGCCAACTGGAGACGGTCCCTGGAGAGGTCAATAATgagccagcagcagcaacagcagcaacagcaacaacagcagcagcagcaacaccagcagcagcagcagcagcagcagcaacaacaacagcagcaacagcagcatctTGCCCAACAGCAACACCAACAGCAACAACCATTATTATCACAACCACAAACCCAAGCTCTATCCCAGCTCCAACAGTCGCAGCCCGTTGCTATTCAGCAAGCGTTGCAACAGCAACACCAATCAATGCACGCGTTGCATCCACCAACGAACCTAAATCACCTTCCATCGCCAACAGATAATCcaacctcgtcgtcgtcgggatCGGTTACGAACACTCCGGCCAAGTCGAACACGCCGCAACTGGGTGGTAGCAGCGTCATGAGCGGTGGTTGTCTGGACGCAACGGAAAAGGCACCGACGCCGATACCCGGCCACGAGACACCGGCTCCACCGACACCGTCGTCAACGGTTGCTCTTACATCCCCGTCAGCGCCAATGGTCGTCAACTCGCTTCACCCACCCCAATCGGTGACGGCGATGCTCGAGACGATGCACAACAGCAATAACGTTAACGGATCGAGTGTCGGAATGATGTCCGGCATCCTGCCGACGACACTTCCGCCAAAGAGTCCCCAGGAAGAATCCTGccacaataacaacaacagtCATCATCTTGCGAACAACAACATTGGCGGTCTCAGTGTCCTCGACACCCTCAAGAGTCCATTtcgcttcgacgatcgaaccCATCCGTTCAGATTCGGTGACGAATTCGGGGCTGCCGGAATGGCCGGCAGACTCGGCGAGTCTCTCATACCAAAGGGCGATCCCATGGAGGCGAGACTCCAAGAAATGCTCCGCTACAACATGGACAAGTATGCCTCGCAAAATCTCGACACTCTCCATATCGCGAGACGCGTTCGTGAATTACTGTCGATACACAATATCGGACAGAGGCTGTTCGCCAAATACGTTCTCGGCCTGAGTCAAGGTACTGTCAGCGAACTGCTGAGCAAACCCAAGCCCTGGGACAAACTCACGGAGAAGGGACGTGACAGCTACAGGAAGATGCATGGATGGGCTTGTGACGAAAACGCCGTGATGCTACTCAAGTCTCTTATACCGAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGTATGCCGAATTTCGGGCGAAGTTCGCAGGACGGCGGTCCGGCTGACATGAGCGATGAGAGACTGGCGCACATACTCTCGGAATCTGGACACTTGCAGATGAGCCGGGGCGAGCACGACACGTCGAACGACGCCGACAGCAAGAGTCCGAGCAGGCTCGGTTGTCCGAGTCCGTTCGGCAAGGACAGGATGGACAGTCAGAACAGGAGATTGAAGAAGTACGAGAACGACGACATTCCCCAGGAAAAAGTTGTGCGAATATATCAGGAAGAATTGGCGAAACTCATGGGCAGACGAGTCGACGATATCCGAGGTCCGCGCGATTTTCCGCCAAGCGCGATGTTTCCGCACTTTTTCAGCGGCGCCCAGGGTCTTCAGGGAATGGAGAGGACGCAGGAGGAGATTCGACTGGCGTTGGACGCTTATCATCGTGAACTTCAGAAGCACAACGTTACACCAGGTCAGAACGCCGCGCTCGCCGGACTGCCTGGTCTTCCGAGTCTGCCGGGTCTGTTGGCCCTTCAGCAACAAGTTCTTCAGCAGCATTACATGGCCGCGAACGGCGGAGGTGTTCAGGATCTGAGCTTGGGCAAAGTAGATCcgcggaataaaataatgaacggCGTTTCGGAAGAGGAGAAGGACAAGATGGAGGAGGCGATGAGGCACGCGGGAAGCGCATTCTCGTTGGTGCGACCAAAGCAGGAGCCGAGCGGACCCCAGTCGACCCCCGGTGGCTCGAGTGCAAGCTCGCCACTCGGCAATTCCATTCTTCCACCGGCGATGACGCCGAGCGAAGAGTTCTCAGGAGCCGCAGCGGCGAGTCCGCTCCAGAGGATGGCTTCGATAACGAACAGCCTCATCAGCCAACCGTCCACACCGACGCATCATTCGGCGAATCAAAGGCCCCTCAAAGCCGTACTTCCACCCATAACTCAGCAACAATTCGACATGTATAACAATCTGAACACCGAAGACATCGTGAAACGGGTAAAGGAGCAGCTGTCGCAGTACTCGATTTCGCAGCGTCTCTTTGGGGAATCCGTGTTGGGCTTGTCTCAGGGTTCGGTTTCAGATCTCCTAGCTCGGCCAAAGCCTTGGCACATGCTCACGCAGAAAGGCCGGGAACCTTTCATTAGAATGAAGATGTTCCTCGAGGACGACAACGCTGTTCACAAACTGGTAGCGAGCCAGTACAAAATCGCACCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCATGCGGAACCCCGATGAAACCGATGCCACCGACAAAATTAGTCCAGGAGCAGTTACAGAATGCAGCGAAGGCTCAGGCAGCGGCGCAAGCCGCAGCGGTGGCAGCGGCGGCCCAGCATCAGCAAGAGGCGCAGATGCAACTTGGTCCACCGCAACCGTCGCCGCAACATCAGTCCCACCCTCAGCCACCACCGCCGATGATGTTGACGCCAACGGGCCACCATCCTCACGCCCAACTCAGCATCCAGGAGTTGCAGAagaaacaacagcagcagcaacaacagcaacaaatgGGTCTTCACTCACCTCATCATCAAATGGCGCCGTCGCCCCTTCGTGATCTTCATCCTCACATCTCCCAGAGCGTCTACGAAATCGCAGCGCTCACGCAAGACCTCGACACCCAAATGATAACGACCAAGATAAAGGAGGCTCTCCTGGCCAACAACATCGGCCAGAAGATCTTCGGCGAGGCGGTTCTCGGTTTGTCGCAGGGTTCGGTCAGTGAGTTGCTCAGCAAACCGAAGCCCTGGCACATGCTTAGCATAAAAGGTCGGGAGCCCTTCATCAGGATGCAACGCTGGCTGTCGGACCCTCACAATGTCGACAAGCTTCAGGCACTGAAGAACGAGAGACGGGAAGCGAACAAGAGACGACGAAGCAGCGGTCCGGGTCACGACAACAGCTCCGACACGTCCAGCAACGACACGGCGGAATTTTATCACGCTGCCTCGCCCGGCCCTGGACCAACGTCGGCGAAGAAGCAGAGAGTTCTGTTCTCCGAGGAGCAGAAGGAGGCCCTCAGGCTCGCCTTCACTCTGGACCCTTATCCGAACGTCGCGACCATAGAATTTCTCGCTGCGGAATTGGCCCTGTCGTCGAGAACGATAACGAATTGGTTTCACAATCATCGAATGCGACTGAAGCAACAGACTCCTCACGGTCAACCGGAGCCTCAGTCGCCGAGGGAACCCGGTCAACCCTTCGATCCCGTGCACTTCAGGCTCTTGCTCAACCAAAGACTATTGGAGATTCACAAGGAGAGACTCGGTCTGGGCAACGTGCCGATACCGTACGCGCCCTACTTCAATCCAAACATAGCGACTCTGATGAACAACGCCCTCAAGGAACAGTGCTCGGGGCTCGATCTTTCGATGGGATCGTTGAAGAGGGAGCCCAATCAGGAGTttgaggacgaggacgacgcaATGAGCAATCTCGGGAGCGAAGATTCCGAGGGCTCGGCCGGTAGCATGAAGAGAGAATCGACGGATCTTAATCAAACCCCAGCGCCTACGACCGCGAGATCGAACAGGCGGAAACCCGCGGCGCCGCAGTGGGTCAATCCCGAGTGGCAAGAGCCGGCGAGGACCGGCGATGAAGTTATCATCAACGGTGTCTGCGTCATGCAGACCGATGACTACGGAGTAAAGAGGGAATCCGAAGAGACCGTCAGGGTGGAGCCTACACCCGTACAGGACAGATACGAGGAAGACGCCCAGAGCGACGCTTCCTCGGTGGCTTCGGGCAACAACGGTCAGGATCACGAGAGTCCTCTGCCAAGCCCGAAACCCAATCACAGCAGTCCGGTAACGTCACCGGCCCCACCGTCCTCCCAACAGACCCAACAAAGTACCGAAGAAAGTCCGAAGGACATTGTGAAAAACGAGCCAGAAGAGACGTGGGATTACTGA
- Protein Sequence
- MRVNPTRDVGRGNRVGVMRRDTARVRAGEDEPEMVEVGVGYSGHEGRPERWDVREAQELEGGRRRGCAGARCSERGGGFRRRWIEWGSRPLGIGGESPAERKGRKQTRADRGSERWTRIARRVEREEGGWWVRVAVRLGRGLPEKQKRREGVVGKGLSSKPDQSLDKWIGQLVEEVSRLQQSLQRLQETSAQATSRLEEELEARRQHITRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERSKALQQAEALKPPSTPDALGGLASPLQRAATASPHAGGGVGGAAGVVTGGSAAPPPTSLVSCSQQAIPTRSTPTPSSVTSTASSLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQQQHLAQQQHQQQQPLLSQPQTQALSQLQQSQPVAIQQALQQQHQSMHALHPPTNLNHLPSPTDNPTSSSSGSVTNTPAKSNTPQLGGSSVMSGGCLDATEKAPTPIPGHETPAPPTPSSTVALTSPSAPMVVNSLHPPQSVTAMLETMHNSNNVNGSSVGMMSGILPTTLPPKSPQEESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGMPNFGRSSQDGGPADMSDERLAHILSESGHLQMSRGEHDTSNDADSKSPSRLGCPSPFGKDRMDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVDDIRGPRDFPPSAMFPHFFSGAQGLQGMERTQEEIRLALDAYHRELQKHNVTPGQNAALAGLPGLPSLPGLLALQQQVLQQHYMAANGGGVQDLSLGKVDPRNKIMNGVSEEEKDKMEEAMRHAGSAFSLVRPKQEPSGPQSTPGGSSASSPLGNSILPPAMTPSEEFSGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAVAAAAQHQQEAQMQLGPPQPSPQHQSHPQPPPPMMLTPTGHHPHAQLSIQELQKKQQQQQQQQQMGLHSPHHQMAPSPLRDLHPHISQSVYEIAALTQDLDTQMITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQRWLSDPHNVDKLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTSAKKQRVLFSEEQKEALRLAFTLDPYPNVATIEFLAAELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVHFRLLLNQRLLEIHKERLGLGNVPIPYAPYFNPNIATLMNNALKEQCSGLDLSMGSLKREPNQEFEDEDDAMSNLGSEDSEGSAGSMKRESTDLNQTPAPTTARSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKRESEETVRVEPTPVQDRYEEDAQSDASSVASGNNGQDHESPLPSPKPNHSSPVTSPAPPSSQQTQQSTEESPKDIVKNEPEETWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394913;
- 90% Identity
- iTF_00905317;
- 80% Identity
- iTF_00905317;