Lnyc002069.1
Basic Information
- Insect
- Listrodromus nycthemerus
- Gene Symbol
- kn
- Assembly
- GCA_963978505.1
- Location
- OZ021679.1:28865307-28895530[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-89 2.1e-85 287.1 0.0 39 182 236 379 226 379 0.97
Sequence Information
- Coding Sequence
- ATGCTGCGCGTCGGTGTTCCCGGCCCCGCCCGTGGAACGGATTCCCGACCCCGTGGGACCCCGTCCACGCCGTCCTCGCTGGCCGTGACACATTCGACAAGCGGCGCCGTAACGGGAAGCAACGCGCGGCTGGGGACTTCGAAGGACCTCGCCTCCTGGCCACCAGAAATCATTCTGCTCGGCCATCCTGTCGCGTCTTCGTCGCTCGCGCATCGACGACCACCGAGGTTTGCAACGACGATacaggacgaggacgagccaCGAAGAGTGGCTTTAACCGTCGATGGCCCCATCCAACCCGGGACGCTAACGACACTCGGGTTGGGAGACTACTCGCGCGAAGTGGTGTGCTGGTGGCAGCAGCGGCACGAAGGACGAAGCCTGTTGCCCCAGGAGGGTCCTTACGGCCTAACCACGCGTTCCGACGAGTGGAGCAGTCTCCTGCCCAGCTCCACTATCGTGGGTGCTGGGGGGTCGCCATGGCTGGGTATTGGTGCGGGTGGAGGAGCCGGTGCGACCGGGGGCGGCGGAAGTCCCGTCGAACTCGAGGGACACTGGGGAAGAAAGTTGTACGGGGCCAGTGTCGcgccaccaccgccgccgcctcATCATCATCCGCGGGCCCCGCTCGTTTTCGCGCCGCAGGACATGCGGCAGATTCTCAAGGAGGAACCGGTACCACGTGCCTGGCCCCAACCCGCCCTTGCTGACAACGCATCtgCCGGCATCGGCAAAGCCCATTTCGAGAAACAACCGCCGAGCAATCTGAGAAAGAGCAATTTCTTCCACTTCGTGATCGCTCTTTACGACAGGGTCGGTCAGCCTATCGAGATCGAGAGGACGGCATTCATCGGTTTCGTGGAGAAAGATCAGGAATCGGAAGGCCAAAAAACCAACAACGGAATCCAGTACAGACTCCAGCTGCTCTACGCCAATGGTCTGAGGCAAGAACAGGACATTTTCGTCAGGCTCATCGACTCGTCGACAAAGCAgGCAATCATGTACGAGGGACAGGACAAAAATCCGGAAATGTGCAGAGTCCTCCTGACCCACGAAGTGATGTGCAGTCGGTGCTGTGACAAGAAGAGCTGTGGAAACAGGAACGAGACTCCGAGCGATCCTGTGATCATCGATCGGTGA
- Protein Sequence
- MLRVGVPGPARGTDSRPRGTPSTPSSLAVTHSTSGAVTGSNARLGTSKDLASWPPEIILLGHPVASSSLAHRRPPRFATTIQDEDEPRRVALTVDGPIQPGTLTTLGLGDYSREVVCWWQQRHEGRSLLPQEGPYGLTTRSDEWSSLLPSSTIVGAGGSPWLGIGAGGGAGATGGGGSPVELEGHWGRKLYGASVAPPPPPPHHHPRAPLVFAPQDMRQILKEEPVPRAWPQPALADNASAGIGKAHFEKQPPSNLRKSNFFHFVIALYDRVGQPIEIERTAFIGFVEKDQESEGQKTNNGIQYRLQLLYANGLRQEQDIFVRLIDSSTKQAIMYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -