Lnyc006818.1
Basic Information
- Insect
- Listrodromus nycthemerus
- Gene Symbol
- Atf3
- Assembly
- GCA_963978505.1
- Location
- OZ021682.1:12536629-12538197[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1 4.5e+03 -2.3 0.8 14 21 97 104 84 105 0.72 2 2 2.2e-16 1.6e-13 50.3 13.0 2 63 132 193 131 195 0.96
Sequence Information
- Coding Sequence
- ATGTACAATCTCAACGTGAACGTGAATCCTAGCCCTATGGCTGCCGCGGGTCTTCTCGGCGTCGCGGCGGCCGAGGTCACACCGAGGACACCGGAAATCGTAAATTCACTAATCGCAATGACCAACCCCTTCGACGGTTACTCGAACGATAGGAGTCGAGAGAGAACCGACTCGACCAGCAGTGGGGAACCTAGTCCACCGAGTGTTCAACACACTTGTAGTCAACTCATCAAAGAAGGTTTGAAGCTGACGCTGCAGACGAAAAGAAGACAAAACGGGAGCAGCGACGAGGCTGCGAAGAAATCGAGGAAGGAGGACGGCAGCGCGGACGATGAGGAGGAAGATGGCGACtccagcaacaacaacagttGCACCGGTTTGACGCCCGAGGACGAGGAGCGCCGGCGAAAAAGACGGGAACGCAACAAGATAGCAGCTACGAAGTGTCGACTGAAGAAGCGTGAAAAAACTGTTATACTCGTTCAAGAATCCGAAATTCTCGAGACACAGAACCACAGTCTCAAGTCGGAGATACAAAAATTGGAGACGCAGAGGCGCAGGCTTGTCGATATGTTGAGTTTGCACGGTTCCACGTGTCTGAAGCAGGGTGGCACGAACACAGCCTCCTTCGAACAGTTCACTGAGCCATTGCCGAGTTACGAGGACAACTTCAGTGCACCACCTCCAGCCCTCAACCAGCCGCAAAACTGTGTCTCATATTATACGAGCAGTTCTTACGTCCCGATGTCCGATGCCGGTTGCACGGTTTAG
- Protein Sequence
- MYNLNVNVNPSPMAAAGLLGVAAAEVTPRTPEIVNSLIAMTNPFDGYSNDRSRERTDSTSSGEPSPPSVQHTCSQLIKEGLKLTLQTKRRQNGSSDEAAKKSRKEDGSADDEEEDGDSSNNNSCTGLTPEDEERRRKRRERNKIAATKCRLKKREKTVILVQESEILETQNHSLKSEIQKLETQRRRLVDMLSLHGSTCLKQGGTNTASFEQFTEPLPSYEDNFSAPPPALNQPQNCVSYYTSSSYVPMSDAGCTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -