Lsab007926.2
Basic Information
- Insect
- Lissocephala sabroskyi
- Gene Symbol
- Pias1
- Assembly
- GCA_037075105.1
- Location
- JBAMCP010001447.1:12918-16385[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4 8e+03 -2.7 0.5 20 39 151 170 143 172 0.79 2 2 3.3e-26 1.8e-22 79.4 5.5 1 50 274 323 274 323 0.98
Sequence Information
- Coding Sequence
- ATGCGAAAAACCCGCTCGCAAACTCAGGCGGAAAACGCCGCATCTTCAACGTCAGGCGGGCCGCTGTCTCAACCACCACAGGGACCACCCTTCGATGCGGTCAAATATAAGGTTCCCGGCGGCGGGTCGGCCCAGATGCCAGTGaatgcggccgctgccgccgcggccggcaatgttttgccatttttacaTACCCACAGCATTAACAGTCATATGCCCATACATCCCGATGTACGTCTCAAAAAGCTGGCCTTCTACGATGTCCTGGGCACCCTGATCAAGCCCTCGACGCTGGTGCCCCGCAACACGCATCGTGTGCAGGAGGTGCCCTTCTGCTTTACGTTGACGCCGCAGCAGGCCAGCGAAATTGCCACCAATCGCGACATACGCAACAGCTCCAAGGTGGAGCATGCGATTCAGGTGCAGCTGCGCTTCTGTTTGGTGGAGACATCCTGCGAGCAGGAGGACTGCTTTCCCCCCAACGTCAACGTCAAAGTCAACAACAAAGCCTGCCAGCTGCCGAACATCATTCCCACAAATCGTCCGAATGTGGAGCCCAAGCGTCCCCCGCGTCCAGTGAATGTCACCTCGAATGTAAAGCTCTCGCCGACGGTCACCAACACCATCCTGGTCCAGTGGTGTCCGGACTACACGCGCAGCTACTGCCTGGCCGTTTACCTGGTGAAGAAGCTCACgtccgcccagctgctgctgcggatgAAGACCAAGGGAGTCAAGCCGGCCGATTATACCCGCGGCTTAATCAAAGAGAAGCTCACCGAGGATGCGGACTGCGAGATTGCCACGACCATGCTGAAGGTTTCGCTGAACTGCCCGCTGGGCAAGATGAAAATGTCGCTGCCCTGCCGGGCGTCCACCTGCTCGCACTTGCAGTGCTTCGATGCCAGTCTTTACCTGCAGATGAACGAACGCAAGCCCACCTGGAACTGCCCGGTGTGCGACAAGCCCGCCATCTACGATAACCTGGTGATCGATGGGTACTTCCAAGAGGTCCTGGGCTCGTCGGCCCTGAAGAGCGATGACACGGAAATCCAGCTGCACCAGGACGGCTCCTGGAGCACACAAAGCCTGCGCAACGAGGCCCAGGTCCTCGACACCTCCAAGACAGTGCAAAAGGTCGAAGTTATCTCCGACGACATAGAGGTCATCACCACCGATGACACGAAGCCGCCAAAATCGGATCCCTCGCCCACACCAACCGAGCAGCCAACCTCCACCTCCAACGAAACGgtTGACTTGACCTTAAGCGATTCGGACGATGAcatgccgctggccaagcgACGTCCGCCGGGCTCTAAGCAAGCCGCTGCCAGCACCACATCCAATGGCAATGGCTCGGCCAGCAGTGCCGcctccagcgccagcgccgccacctCAGCCACACAACGCAGTGCCTATCCAGCGCAGTCCTCGAAAACTGAGTTGTCCTCAATCGATCTTTTGATCTCCACTTAA
- Protein Sequence
- MRKTRSQTQAENAASSTSGGPLSQPPQGPPFDAVKYKVPGGGSAQMPVNAAAAAAAGNVLPFLHTHSINSHMPIHPDVRLKKLAFYDVLGTLIKPSTLVPRNTHRVQEVPFCFTLTPQQASEIATNRDIRNSSKVEHAIQVQLRFCLVETSCEQEDCFPPNVNVKVNNKACQLPNIIPTNRPNVEPKRPPRPVNVTSNVKLSPTVTNTILVQWCPDYTRSYCLAVYLVKKLTSAQLLLRMKTKGVKPADYTRGLIKEKLTEDADCEIATTMLKVSLNCPLGKMKMSLPCRASTCSHLQCFDASLYLQMNERKPTWNCPVCDKPAIYDNLVIDGYFQEVLGSSALKSDDTEIQLHQDGSWSTQSLRNEAQVLDTSKTVQKVEVISDDIEVITTDDTKPPKSDPSPTPTEQPTSTSNETVDLTLSDSDDDMPLAKRRPPGSKQAAASTTSNGNGSASSAASSASAATSATQRSAYPAQSSKTELSSIDLLIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -