Lsab005031.1
Basic Information
- Insect
- Lissocephala sabroskyi
- Gene Symbol
- Gata4
- Assembly
- GCA_037075105.1
- Location
- JBAMCP010000714.1:7659-11542[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2 5.6e+03 -2.3 0.1 22 28 45 51 42 55 0.64 2 2 8.1e-17 2.2e-13 50.1 2.5 1 35 358 391 358 392 0.98
Sequence Information
- Coding Sequence
- ATGTTTAACACACCGACACCGGAGGAGGAATACAATCACGAGCATAGTGATGATTCATCACCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGCCGTTGCCCAATGACGGCTTTCCCACGCTCATTTGTCGGGACTGCCGAGCAAAACTCAAATCCTTTTGGACCTTTCGTGCGATGGCCCTCAACTCGCATAAAGCTTTAAAGGACTTCCTCAGCGAATCCGAGTGCTCCAAACTTGACGCGGCCAATTTGGAGCTCAAGCTGGACACGATTTTGAAGTCCTCATCGGAGGCTATAGCGGCGCGGGCTTTGACCGAGCTCAGCAAatccacaaaaacaaattatatcaGCTCTCAATACGACGCGccccaagcaaatcaaatactCGAGATTCATggcaacgccgccgctgccacgaCAACTAGAATGGAAGGCGATCAGAAAAGCTTCAGTATTATTATGAACGATGTTGTTGGTCCCTCGAACTACAAACTGAAGGCCGTGGCGGCCAAAGTGAATGCGCTTAACAATGCCAGCACTCAACAGTCCGGCCTCTCGGACTCCGAGGACAGCTCGGACTCGAATAAACTAGAGATGGACATTGCCTCGGCCACCAACGACCGCAAGACCCCGGACAGCGTGAGCTCGGACCATGCCACCGACGCGGCCACCACTCAACTTTGGCAGGCTTTGGCCCGCTCGGCAGCTAAGAACAAGGAGGAAACCCCAGCCTCGGAGCTGATCAGGAATATGATGAGCCATCATCACTCGTCCTTCAGGTTCCCGGTGCCGCCGGCGTTGTTAATCGGAAAAGTACCTGATGAGCCCATAGCGCTGCTAAAGGACAGCTCGGATGCGCAGTCCAGCAAGGTGAAGATTTGTAGGCGGAAACAAAGTTTCCCCACGAAGACCGATTGCGGCGAGGCCGGGCCCCCCGGACCGGCCGAGGCCTTTGCTAATCCCGAAATGGCCTGCAGTGCAATACCCGATGCAATCAAGGACAAAAAGaactTCAAGAGCTCGAATAGCAGCGTTTTGCCTGGCACCCAGAAGGACATGTCCTGTTCGAATTGTGGCACTCTGACCACAACAATTTGGCGGCGCAGCGTCCGCGGCGAAATGGTGTGCAATGCTTGCGGTCTTTATTTCAAGTTGCATGGCGTCAACAGGCCGCATTCCATGCGACGCGACACAATACACACCCGGCGCAGGCGGCCAAAGGAATGCGAACGGTCCAAGAAAAGAAACAAACAACTGCCATGTTCTTCGGGAGCAGAAATCAAAACGGAAAATGTGCACTTGCCAGCGGAGCCCAAGAATATGGAATTTATGGCCCCGCCAGAGACGCTTTCTATATCCGATCTGGTCTTCAATaAATACAAGGCACAAATTTCGGATGTGGAAGCGGCTGCTACGTTAAAGGATGTTTTATTGCGACGCAAGAAATCACAATCTTCACCGGCGTTTAATGATACCTGCGAAACGGAGGAGTTGTCCGTGCCCCTGAATCTTGTTTCCAGTGAGAATAATACGAAGTTAACATAA
- Protein Sequence
- MFNTPTPEEEYNHEHSDDSSPHITIQIFNCLSIKPLPNDGFPTLICRDCRAKLKSFWTFRAMALNSHKALKDFLSESECSKLDAANLELKLDTILKSSSEAIAARALTELSKSTKTNYISSQYDAPQANQILEIHGNAAAATTTRMEGDQKSFSIIMNDVVGPSNYKLKAVAAKVNALNNASTQQSGLSDSEDSSDSNKLEMDIASATNDRKTPDSVSSDHATDAATTQLWQALARSAAKNKEETPASELIRNMMSHHHSSFRFPVPPALLIGKVPDEPIALLKDSSDAQSSKVKICRRKQSFPTKTDCGEAGPPGPAEAFANPEMACSAIPDAIKDKKNFKSSNSSVLPGTQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECERSKKRNKQLPCSSGAEIKTENVHLPAEPKNMEFMAPPETLSISDLVFNKYKAQISDVEAAATLKDVLLRRKKSQSSPAFNDTCETEELSVPLNLVSSENNTKLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -