Lsab001353.1
Basic Information
- Insect
- Lissocephala sabroskyi
- Gene Symbol
- CAMTA2
- Assembly
- GCA_037075105.1
- Location
- JBAMCP010000117.1:73207-95052[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.66 1.8e+04 -4.0 5.2 20 71 121 172 75 202 0.43 2 3 4.3e-49 1.2e-44 151.4 2.2 2 116 260 372 259 372 0.98 3 3 0.39 1.1e+04 -3.3 0.2 47 63 1489 1505 1451 1531 0.46
Sequence Information
- Coding Sequence
- ATGGCCGGTTATCGGGCCCTGCCTCTGGCCCCGGTCACCGCCAGCAGCATGGCAGCCacggtggctgccgccgcccagcccaaTGTCGGCCACGGGCCCACGATGTCCTATGCCGCCCATCACCAGTCGATGACGGCCATGTCGAATAACGGTATTATCTATCAGTCGGCGGTACACGCCTCCATACACAGTCTCAACACTGTGCAGAGCCAACATCGCTCATCAACCACGCATCATCACATTTTAgcgacggcggtggcagcaacagcggctgcagcggccctGCCGCCGACGGCTGCCTCGACGGGGACGCAGGCCTTGTATGCgccgcagcaccagcagcagccgccacagaaccaccagcagcaccaccaccagcagcaacaacaacagcagcagcagcagcagcaactccagcagcagcaacaacagcaacagcagcaacaacagcagcagcatcagcagcatttgcagcagcagcaacaactgcaccaccaacaccagcagcagcaccagcaactgTTGCCGCATCCCCAGCAGCATCTGGTgcaccatcaccatcatcatcaccaccagcaattGTCGCTGCATCAGAACCATTTGTACTTCAGCAACACGAGCATTGCCGGCGGTGGTCCGCATCCGcatcaccaccatcaccaccggCAGATCTTCAGTCATTTGCAGAGCGCCTTAATGCCGCTCAGCGTCAATGGCGAACCTATCAAACTACCCGACAATTTGGAGAGCCTGCCAAGAGCGGACAGTTTTCCATCACAGCGTCATCGTTGGAATACAAATGAGGAAATCGCCGCGATTCTTATCAGTTTCGATAAACACAGCGAATGGCAATCAAAAGAAGTCAAAACAAGACCGAAGAGCGGTTCCCTGCTGCTCTACTCCCGGAAGAAGGTGCGCTACCGACGCGATGGCTACTGCTGGAAGAAGCGCAAGGACGGCAAGACGACCCGGGAGGATCACATGAAACTCAAAGTACAAGGCACTGAGTGCATCTATGGTTGTTATGTACACTCGGCCATATTGCCCACATTTCATAGGCGATGTTATTGGCTGCTGCAGAATCCTGACATTGTTTTGGTCCACTATCTGAATGTACCATATCCTGACGATAACAAAATGGCGGTCATTGCCCCGAGCATCACCCTCTGGGGCGACAAAAAGGAGTGGACCAAAGAGGAGCTCGTCAGCCAACTAAAGCCGATGCTGTCCACGGTGAACTCCGACGAAGACTCAGATTCGGGCAACGATATCGAAATATCGACGGCCGAGACCGTGGAGTCGATTGTCTGCCAGCTCATGGAGAAGCAGCGCCTGTCCCGCCAGGCCGCCCTGGTCAAGCAGCTggactgcggctgcggcgactCCGGCTGCGCCGACGGCAAGAGCTGCTCGCATCCGGTGATGCGGCGCACGGGCATCGTCAAGTCGGTCTCGGACAAGCGGCTGGGGATGAACGAGGCCTACAAtggggcggccagcggcactCCCAATGTCGTGGTGGCCACCAAGTTGTATTCTCGGTGGTCGGAGCGGCATCGGCAGAGGGACGCAATGCATTTGGACAATCCGTATCACAATGCCGGGCAGCAGTTGCCGCAGGAGTCGGCCATTAAGTTTCAGATCATtccgccccagcagcaacagcagcagcagcagcaacaatcgcatCACTTGCAGCAACatccacagcagcagcaggcggcggccgtcGAGGGGAATTATCAGCAGCAATATCGTGGTAGTCAAATTGCTTCCAGTGATAATAGCAGCCAAATTAGTGGCAGTGACGAAAGCAGCTTCGGTGCCAATCAGaatagcaacagcaacagcaacaacagcggcggcagcagcaccaccaacaatgacgacgacaCGGCCAACGAGGCCTTGGGCTTCTTCAACGAGACCTTGGATCTGTCTCACGAGGACCTCCAACGCACTTTGATAGCCAACATGCCCtacaccaccaacagcaacagcagcaccaacaacaatccaACCGAGCCCAGCAACCAAGACCAGCCGCGGCCCGAAGTGGCCGTCGAGTCGTCGGCCCACGAAGCCGGCGAAGCTGAAGGCGACGACGAAGACACCGACGATGTCTTTGCCAATCTCGATGCCTTCGACATGCTGGTGGAGTTCCCCGAGCTCGACCTGGACGACAAACAGGCCCTCACCAACACCGCCCTCGAGCAgggccaggcggccgtcgTCTCCTATCTCAGCGActccgcctcgctggccagcgcctcgcAGTGCGACCGCAAGCTTCTCCAGATCTGCGACTTCAGCCCCGAATGGTCGTACATCGAGGGCGGCGTCAAGGTCCTGGTTGCCGGCCCCTGGACCAGCAATGCCACCTACACGGTCCTCTTCGATGCCCAGCCCGTGCCCACGGTGCTGGTCCAAGAGGGCGTGCTGCGTTGCTATTGCCCGGCCCACGAGGTGGGCTTCGTGACGCTGCAGGTGGCCTGCGGCGGCTTCCTGGTCTCCAATGCGGTGATGTTCGAGTACAAAATGTCCCTGCTGGCGGATGCCCCCTTCGATGCCAGCAGCTCCAACGATTGCCTGTACAAATTCACGCTGCTCAATCGCCTGTCCACCATCGACGAGAAGCTCCAGGTCAAGGCCGAGACCGAGGCCACGGCCGACCAGACGGCGCTTTATTTGGAGCCCAATTTCGAGGAGAAGCTGGTGGGTTACTGCAATAAGCTGGCCAAGCGAACTTGGGGAGTGGCGGCCCCGGCCACTTGGAGTGTTGGCCTGCGCGGCATGACGCTGCTGCACTTGGCTGCGGCCATGGGGTACTCAAAGTTGGTCTGCGCCATGCTCAACTGGCGGGCCGAGAATCCACATATCATTTTGGAGACCGAGCTGGACGCCCTCAGCCAGGACGTCCATGGCTACACGCCGTTGTCGTGGGCCTGCGTGCGCGGCCATGTCGAGTGCTCGCTGATCCTCTACAAATGGAACCACAATGCCCTCAAGATCAAGACCCAGGCCCAGCAGACGCCGCTGGACCTGGCCAATCTGAAGGGCCATCGGCAGATCTTGGCCCAGATCTACCGCCTGGAGAAGGAGCGCTGCCGCAAGCCCCACAACCGCGGGGCCTTCGCCAGCTTGGGGCGCAGTCTGCACAGCAACGAGGCCGAAGGCGAGGAGCAGGCCTACAGCGCCTACGAACTGGAGTTGCAGCGCAAGCACGACGGCGTCTTCCTGCGGCCCGTGGCGGTCCAAAGCAATCAGAGTCCGCCCAACAACAGCCGCTACTCGAAGCGGCCGTCCATCGACAGCGGCATCAACATGGACATTCGCAGCAAATCCGGCAAGCCTTTGAGTCGCCTTCATGGAACCTTTGACAGCCATGATAGTTATACTTTGGGCGTGGAATCGCCGCTGGATCCTTTGTCGGGAACGAATTCGCTGCTCTCGCCGCTGCGTAAAATGGACTTTGCCTTGTGCGAAGTTTCTACGGGCGAATCGAGTCCCATACACGAAAAAGATATCGATTGCGACGACAATTCCACCAGCATCACCGACGTTACCATAAACAATGATCACCTCAACGATGCGGTCGTAGGGGATTCCGATGCCAAGGTGCTGACTCTAGCCGAGCACATCATAGCCGCCATGCCCGAGCGAATCAAGAACGAGGCCGATGAAATGATGGTCTTGGGCAGCCCGCTGACCGAGCCTTTGACCTCGGAGTCCTCGGCTCTGACCGACAGCTTCATGGATCCCATACTCGACTCGCTGCCGAACACGCACTTCGACAGCGACTTCAGCTTCGATTTCCACGACCACAGCTACCGCTATCACGATGTCAGCACGCCCTGCTCCAGCCTGAGCCCGGCCAGCTCGGGGCCCCTGCAGTCGCCGGCCAGCTACTCGATTCTGGGCACCGATCCCTCGGTCAGCTCGCCCAGTCCCCCGCCGTCGACCAAGCAGCTCACCGAGTTCCTCCACGCCTCCAGCATCTCCCAGTACCCCTTCGAGGCGGACTTCTCCAAGCTCACGCTCACCGACACCGAGCAGCGCGAGCTCTACGAGGCGGCCAAGTGCATCCAGAAGGCCTACCGATCCTACAAGGGCCGCCAGAAGCTCGAGGAGCAGAACAAAGAGCGCACCGCGGCCATTGTCATTCAGAACTACTACCGGCGGTACAAGCAGTACGCCTACTACAGGCAAATGACCAATGCCGCCTTGGTCATCCAGCATGGCTATCGATCGTATCGGAGGAACAAGCGGTTCAAGAAATCCCAGCACACCTCGGCCAATGGCTTGGGCGGcttgggcgggggcagcgagCATGGCAGTGTGAGCAGCAATTCGCAGTGTTTGTCGAGCTTCTACGATCACTACAagcaggaccagcagcagcagcagcaggagatGAGCTCGCAGCCCAGCACGCCGAAGGAGACCAGTCCTTCGGGTCCCCTAAAacgCACTTACTCACAATCAACGCAAAATCAAGCTGCCAGGAAAATCCAACAGTTTATGAGACAATCACGCATCAAACTTCAGAGAGAGCGAGCCGAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTTTCAAGGGCTGCAACTGGAGCCGTCAGTGTGCCACAATGAAAGCAGTAATCCTTCGCAGCTGGATTCGCATCAATTGCCAACGAACCAGTGA
- Protein Sequence
- MAGYRALPLAPVTASSMAATVAAAAQPNVGHGPTMSYAAHHQSMTAMSNNGIIYQSAVHASIHSLNTVQSQHRSSTTHHHILATAVAATAAAAALPPTAASTGTQALYAPQHQQQPPQNHQQHHHQQQQQQQQQQQQLQQQQQQQQQQQQQQHQQHLQQQQQLHHQHQQQHQQLLPHPQQHLVHHHHHHHHQQLSLHQNHLYFSNTSIAGGGPHPHHHHHHRQIFSHLQSALMPLSVNGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDEDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDSGCADGKSCSHPVMRRTGIVKSVSDKRLGMNEAYNGAASGTPNVVVATKLYSRWSERHRQRDAMHLDNPYHNAGQQLPQESAIKFQIIPPQQQQQQQQQQSHHLQQHPQQQQAAAVEGNYQQQYRGSQIASSDNSSQISGSDESSFGANQNSNSNSNNSGGSSTTNNDDDTANEALGFFNETLDLSHEDLQRTLIANMPYTTNSNSSTNNNPTEPSNQDQPRPEVAVESSAHEAGEAEGDDEDTDDVFANLDAFDMLVEFPELDLDDKQALTNTALEQGQAAVVSYLSDSASLASASQCDRKLLQICDFSPEWSYIEGGVKVLVAGPWTSNATYTVLFDAQPVPTVLVQEGVLRCYCPAHEVGFVTLQVACGGFLVSNAVMFEYKMSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQVKAETEATADQTALYLEPNFEEKLVGYCNKLAKRTWGVAAPATWSVGLRGMTLLHLAAAMGYSKLVCAMLNWRAENPHIILETELDALSQDVHGYTPLSWACVRGHVECSLILYKWNHNALKIKTQAQQTPLDLANLKGHRQILAQIYRLEKERCRKPHNRGAFASLGRSLHSNEAEGEEQAYSAYELELQRKHDGVFLRPVAVQSNQSPPNNSRYSKRPSIDSGINMDIRSKSGKPLSRLHGTFDSHDSYTLGVESPLDPLSGTNSLLSPLRKMDFALCEVSTGESSPIHEKDIDCDDNSTSITDVTINNDHLNDAVVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPLTEPLTSESSALTDSFMDPILDSLPNTHFDSDFSFDFHDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSQHTSANGLGGLGGGSEHGSVSSNSQCLSSFYDHYKQDQQQQQQEMSSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQNLQFQGLQLEPSVCHNESSNPSQLDSHQLPTNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -