Lsab012910.1
Basic Information
- Insect
- Lissocephala sabroskyi
- Gene Symbol
- Dnajc1
- Assembly
- GCA_037075105.1
- Location
- JBAMCP010005618.1:369-2050[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.15 2e+02 2.8 0.0 7 23 25 41 24 62 0.89 2 3 8.2e-08 0.00011 22.8 0.0 4 38 191 228 188 229 0.87 3 3 4e-08 5.5e-05 23.8 0.1 3 43 282 327 280 329 0.84
Sequence Information
- Coding Sequence
- ATGCAATCGGTTAAATTGGGCATCTTTGTTGTATGCCTCTTGCTTTTGTGCGGCCACTGTGTCGCTTGGCACTCAGAAGACCTTGAGATTTTCGATTTGGTAGAGGAGGTCGGCAAGAATTTTTACACGTTTATGGGCATACATTCAAATGCAACCAATGTAGAAATCAAACGAGCATTCCGCAACCTATCCATAGTCTTACATCCAGACAAGAATTCCGCCGATAATGCCAATATACAATTCCGCAACTTGGTCTCCATCTATGAAGTACTCAAGGACCCCTCCAAGCGTGAGAGTAAGGCAAACGAATTAAAGAATCGTGCTCTCGAAAAGCGACGCATTGAACTTGAGGCTGTCCGTCGCCAGGAGGATATGGAACGCGAGGCCGAGAAGCAGGTGCAGTTGCGGaaagagcaaaaggaaaatctTCGAAAGCGTAAACAAAGTTCAAAAGCCCCCGAAAAGACCGAAGAAGAATTACGTGGCTATTCTCAAATTCAGGCCCGTGAGTTTACGGAAGAAGATGCTGTACGGCCTGTTACCCAAAAAAACACGATTAGCGGTGGCTTCTGGACCGATGAGGACTTGACCGAGTTGATTCGTTTGGTAAAAAAGTATCCAGGTGGTGCGGGAAGTCGTTGGAATACCATTGCGGATTCCATGAATCGCACTGTTCAGGAGGTCACCTTTATGGCGGCCAAAATGAAGGAGAACGGCTATCGAATACCCGGACAAGGTGATAGCGTTGCTGAAAACATTGTCCAGGCCTCTCAAGAGGCCGTTTATAAGGAAAAGAGCAAGCAACTTAGTACCAGCGAGAAGAGTCTGCTTGTTCCAGAAACAAATTGGTCTCAGGAACAACAACGCGCCCTCGAAGCAGCCATTGTAAAGTACCGCAAAACACCGGGTAATGATCGCTGGCATAGGATAGCTAACAGCGTGCCGGACAAGACCAAAGACGAGTGTCTTGTccgttataaatatttatgcgaaCTGATTAAGAAccagaaaaaaactcaacaggAGAAGGAGGTCGACCTTGAACATAGGGCTGAGGCACTGCTTGACGAAGCGACAAAGCCAGTCGACATTGATCCACCGGCGATAATCGGAGCCCCGGTAGCCTCTTTGAAAAAGCTAAGTAAACGCGAGAGGCGTCGGCGCAAACAGAATATGTCCAGTGGCGAAGATTCTGACGACGTCTACCAATACGAAATCAGTTAA
- Protein Sequence
- MQSVKLGIFVVCLLLLCGHCVAWHSEDLEIFDLVEEVGKNFYTFMGIHSNATNVEIKRAFRNLSIVLHPDKNSADNANIQFRNLVSIYEVLKDPSKRESKANELKNRALEKRRIELEAVRRQEDMEREAEKQVQLRKEQKENLRKRKQSSKAPEKTEEELRGYSQIQAREFTEEDAVRPVTQKNTISGGFWTDEDLTELIRLVKKYPGGAGSRWNTIADSMNRTVQEVTFMAAKMKENGYRIPGQGDSVAENIVQASQEAVYKEKSKQLSTSEKSLLVPETNWSQEQQRALEAAIVKYRKTPGNDRWHRIANSVPDKTKDECLVRYKYLCELIKNQKKTQQEKEVDLEHRAEALLDEATKPVDIDPPAIIGAPVASLKKLSKRERRRRKQNMSSGEDSDDVYQYEIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -